BAC Information

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BAC

Clone NameB6Ng01-186K11
Chromosome6 (Build37)
Map Location 132,817,758 - 133,038,231
singlet/doubletdoublet
Overlap geneTas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140
Upstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116
Downstream geneLOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186K11.bB6Ng01-186K11.g
ACCGA011437GA011438
length1,1621,128
definitionB6Ng01-186K11.b B6Ng01-186K11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,037,077 - 133,038,231)(132,817,758 - 132,818,891)
sequence
gaattcagtgtttcttcctcatcatcaacaacagcaaaactaaaaaacaa
acaaacaaacaaaagaacaaagcaaaaacaatagggtgctctggataagg
tgtgtagtatgtggagaaagattaaactagctgccttggaaaatatataa
ttttcacccaaaacactgtggacattagtgatttgtattttcttggtact
gtatatatgggtttttggcagtaaatgttttgaaagttcaagaattttat
acacagagcattttagaagattgattaacacatcttcattacttaactag
aaactaaatcatccttccagtggcaatgaatcctatcctatatttcacat
taacatttattttaagtgtgaaattaataataggaaatttaggcagtgca
tttttagcctgggtgaatatcatgggtggactgggtcagaaaaagaaaga
tgtcgtcagtgttttagatcttccctgctctggctctctccggaatctct
gtgatctggacactaattgcaagtttattggtattagccacctacccagc
tctaataactagaaaaagtaaaagaattatgaaaaaatattgaacagtga
ccaatcattgcagcatctggcttgctacatgactcagcatcttctatttt
ctcaagatagctacactaaaaacactctttttcttgaccagaagttgaaa
ccttaaaaagctagtttaattgacattgctgccatatttgctcatcattt
tcttaaacatgttagtcataagcagatatattgatgtctggattgatgga
tatgggcaaatatgtcctatagtgctatatcaagaaactctacccaattt
tctaggctggtttgacacatcaacactatgttcataaccacaccattcac
tgtgtttctgataatgtttactttgctcatcttttcctttagaaacatct
gaagaacacccagcacaatgtcaaaggctccagagaagtcaaaactgcag
cccacataaagactcttgcaaatggccggtccacctcatggtactacatt
atggctttttgtcacttctggtggttgtattccacagtttggaatttcgg
tttcctttaaaacacaggaaattttataggatgccctttttcattttaat
tccgaatgtagg
gaattcaacatcttattcaacttcagaaaactggatattagacacagtgt
ctggatgaagcagaggtgatctctttgggaaaaaaagccaagtagtcata
aagaatttatgaaacaattcctgggattgtttatatttgttacaaacaaa
tttatatgtttgttagtcagtaatgtataagtgggattttaaagcatgat
tatcttgaatttttaacaaaaaacatgtagtgctttttaaatgtagcaga
aacattaaaaattgaagcatgttctcacagataataagcaccagtgatat
ttttacttttacaataatattatttgtggaattagtaataggaattttag
gaaatggattcatagcactagtgaatatcatggactggaccaagagaaga
agcatttcatcagcggatcagattctcactgctttggccattaccagatt
tctctatgtgtggtttatgatcatttgtatattgttattcatgctgtgcc
cacatttgcttacaagatcagaaatagtaacatcaattggtattatttgg
atagtgaataaccatttcagcgtttggcttgccacatgcctcggtgtctt
ttattttctgaagatagccaatttttctaactctttgtttctttacctaa
agtggagagttaaaaaagtagttttaatgataatacaggtatcaatgatt
ttcttgattttaaacctgttatctctaagcatgtatgatcagttctcaat
tgatgtttatgaaggaaatacatcttataatttaggggattcaaccccat
ttcccacaatttccttattcatcaattcatcaaaagttttcgtaatcacc
aactcatcccatattttcttacccatcaactccctgttcatgctcatacc
ctttcacagtgtccctggtagcctttctcatgctcatcttctcactggtg
gaagcatcacaaaaaagatgcaggtcaatgcccaaaccacctagagatgc
cagcaccatggcccacataaagcttgcaaacagggttctctctgctgctg
atgcagtaatacttactttttattgtcatagatgttgagctaagttggat
aggagcaattatacttttattttgacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133037077_133038231
seq2: B6Ng01-186K11.b_42_1203 (reverse)

seq1  CCTACATCTGGAATTAAAATGAAAA--GGCATTCCTATAATA-TTCCTGT  47
      |||||||  ||||||||||||||||  |||| |||||||| | |||||||
seq2  CCTACATTCGGAATTAAAATGAAAAAGGGCA-TCCTATAAAATTTCCTGT  49

seq1  GTTTTTAAAAGAAACCAAAATTCCAAAATTGTGGAATACA--CA-CAGAA  94
      | ||||||| |||||| ||||||| ||| |||||||||||  || |||||
seq2  G-TTTTAAAGGAAACCGAAATTCC-AAACTGTGGAATACAACCACCAGAA  97

seq1  GTGAC-AAAAGCCAT-ATGTAGTAACATGAGGT-GACC-GCCATTTGC-A  139
      ||||| ||||||||| |||||||| |||||||| |||| ||||||||| |
seq2  GTGACAAAAAGCCATAATGTAGTACCATGAGGTGGACCGGCCATTTGCAA  147

seq1  GAGTCTTTATGTGGGCTGCAGTTTTGACTTCTCTGGAGCCTTTGACATTG  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTTTATGTGGGCTGCAGTTTTGACTTCTCTGGAGCCTTTGACATTG  197

seq1  TGCTGGGTGTTCTTCAGATGTTTCCTAAAGGAAAAGATGAGCAAAGTAAA  239
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCTGGGTGTTCTTCAGATGTTT-CTAAAGGAAAAGATGAGCAAAGTAAA  246

seq1  CATTATCAGAAACACAGTGAATGGTGTGGTTATGAACATAGTGTTGATGT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCAGAAACACAGTGAATGGTGTGGTTATGAACATAGTGTTGATGT  296

seq1  GTCAAACCAGCCTAGAAAATTGGGTAGAGTTTCTTGATATAGCACTATAG  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAACCAGCCTAGAAAATTGGGTAGAGTTTCTTGATATAGCACTATAG  346

seq1  GACATATTTGCCCATATCCATCAATCCAGACATCAATATATCTGCTTATG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTTGCCCATATCCATCAATCCAGACATCAATATATCTGCTTATG  396

seq1  ACTAACATGTTTAAGAAAATGATGAGCAAATATGGCAGCAATGTCAATTA  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACATGTTTAAGAAAATGATGAGCAAATATGGCAGCAATGTCAATTA  446

seq1  AACTAGCTTTTTAAGGTTTCAACTTCTGGTCAAGAAAAAGAGTGTTTTTA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGCTTTTTAAGGTTTCAACTTCTGGTCAAGAAAAAGAGTGTTTTTA  496

seq1  GTGTAGCTATCTTGAGAAAATAGAAGATGCTGAGTCATGTAGCAAGCCAG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGCTATCTTGAGAAAATAGAAGATGCTGAGTCATGTAGCAAGCCAG  546

seq1  ATGCTGCAATGATTGGTCACTGTTCAATATTTTTTCATAATTCTTTTACT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCAATGATTGGTCACTGTTCAATATTTTTTCATAATTCTTTTACT  596

seq1  TTTTCTAGTTATTAGAGCTGGGTAGGTGGCTAATACCAATAAACTTGCAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAGTTATTAGAGCTGGGTAGGTGGCTAATACCAATAAACTTGCAA  646

seq1  TTAGTGTCCAGATCACAGAGATTCCGGAGAGAGCCAGAGCAGGGAAGATC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTCCAGATCACAGAGATTCCGGAGAGAGCCAGAGCAGGGAAGATC  696

seq1  TAAAACACTGACGACATCTTTCTTTTTCTGACCCAGTCCACCCATGATAT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACTGACGACATCTTTCTTTTTCTGACCCAGTCCACCCATGATAT  746

seq1  TCACCCAGGCTAAAAATGCACTGCCTAAATTTCCTATTATTAATTTCACA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCAGGCTAAAAATGCACTGCCTAAATTTCCTATTATTAATTTCACA  796

seq1  CTTAAAATAAATGTTAATGTGAAATATAGGATAGGATTCATTGCCACTGG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATAAATGTTAATGTGAAATATAGGATAGGATTCATTGCCACTGG  846

seq1  AAGGATGATTTAGTTTCTAGTTAAGTAATGAAGATGTGTTAATCAATCTT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATGATTTAGTTTCTAGTTAAGTAATGAAGATGTGTTAATCAATCTT  896

seq1  CTAAAATGCTCTGTGTATAAAATTCTTGAACTTTCAAAACATTTACTGCC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATGCTCTGTGTATAAAATTCTTGAACTTTCAAAACATTTACTGCC  946

seq1  AAAAACCCATATATACAGTACCAAGAAAATACAAATCACTAATGTCCACA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCATATATACAGTACCAAGAAAATACAAATCACTAATGTCCACA  996

seq1  GTGTTTTGGGTGAAAATTATATATTTTCCAAGGCAGCTAGTTTAATCTTT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGGGTGAAAATTATATATTTTCCAAGGCAGCTAGTTTAATCTTT  1046

seq1  CTCCACATACTACACACCTTATCCAGAGCACCCTATTGTTTTTGCTTTGT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATACTACACACCTTATCCAGAGCACCCTATTGTTTTTGCTTTGT  1096

seq1  TCTTTTGTTTGTTTGTTTGTTTTTTAGTTTTGCTGTTGTTGATGATGAGG  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTTGTTTGTTTGTTTTTTAGTTTTGCTGTTGTTGATGATGAGG  1146

seq1  AAGAAACACTGAATTC  1155
      ||||||||||||||||
seq2  AAGAAACACTGAATTC  1162

seq1: chr6_132817758_132818891
seq2: B6Ng01-186K11.g_65_1192

seq1  GAATTCAACATCTTATTCAACTTCAGAAAACTGGATATTAGACACAGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATCTTATTCAACTTCAGAAAACTGGATATTAGACACAGTGT  50

seq1  CTGGATGAAGCAGAGGTGATCTCTTTGGGAAAAAAAGCCAAGTAGTCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGAAGCAGAGGTGATCTCTTTGGGAAAAAAAGCCAAGTAGTCATA  100

seq1  AAGAATTTATGAAACAATTCCTGGGATTGTTTATATTTGTTACAAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTATGAAACAATTCCTGGGATTGTTTATATTTGTTACAAACAAA  150

seq1  TTTATATGTTTGTTAGTCAGTAATGTATAAGTGGGATTTTAAAGCATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGTTTGTTAGTCAGTAATGTATAAGTGGGATTTTAAAGCATGAT  200

seq1  TATCTTGAATTTTTAACAAAAAACATGTAGTGCTTTTTAAATGTAGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGAATTTTTAACAAAAAACATGTAGTGCTTTTTAAATGTAGCAGA  250

seq1  AACATTAAAAATTGAAGCATGTTCTCACAGATAATAAGCACCAGTGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAAAAATTGAAGCATGTTCTCACAGATAATAAGCACCAGTGATAT  300

seq1  TTTTACTTTTACAATAATATTATTTGTGGAATTAGTAATAGGAATTTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTTACAATAATATTATTTGTGGAATTAGTAATAGGAATTTTAG  350

seq1  GAAATGGATTCATAGCACTAGTGAATATCATGGACTGGACCAAGAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGATTCATAGCACTAGTGAATATCATGGACTGGACCAAGAGAAGA  400

seq1  AGCATTTCATCAGCGGATCAGATTCTCACTGCTTTGGCCATTACCAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCATCAGCGGATCAGATTCTCACTGCTTTGGCCATTACCAGATT  450

seq1  TCTCTATGTGTGGTTTATGATCATTTGTATATTGTTATTCATGCTGTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATGTGTGGTTTATGATCATTTGTATATTGTTATTCATGCTGTGCC  500

seq1  CACATTTGCTTACAAGATCAGAAATAGTAACATCAATTGGTATTATTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTGCTTACAAGATCAGAAATAGTAACATCAATTGGTATTATTTGG  550

seq1  ATAGTGAATAACCATTTCAGCGTTTGGCTTGCCACATGCCTCGGTGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAATAACCATTTCAGCGTTTGGCTTGCCACATGCCTCGGTGTCTT  600

seq1  TTATTTTCTGAAGATAGCCAATTTTTCTAACTCTTTGTTTCTTTACCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTGAAGATAGCCAATTTTTCTAACTCTTTGTTTCTTTACCTAA  650

seq1  AGTGGAGAGTTAAAAAAGTAGTTTTAATGATAATACAGGTATCAATGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGAGTTAAAAAAGTAGTTTTAATGATAATACAGGTATCAATGATT  700

seq1  TTCTTGATTTTAAACCTGTTATCTCTAAGCATGTATGATCAGTTCTCAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATTTTAAACCTGTTATCTCTAAGCATGTATGATCAGTTCTCAAT  750

seq1  TGATGTTTATGAAGGAAATACATCTTATAATTTAGGGGATTCAACCCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTTATGAAGGAAATACATCTTATAATTTAGGGGATTCAACCCCAT  800

seq1  TTCCCACAATTTCCTTATTCATCAATTCATCAAAAGTTTTCGTAATCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACAATTTCCTTATTCATCAATTCATCAAAAGTTTTCGTAATCACC  850

seq1  AACTCATCCCATATTTTCTTACCCATCAACTCCCTGTTCATGCTCATACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATCCCATATTTTCTTACCCATCAACTCCCTGTTCATGCTCATACC  900

seq1  C-TTCACAGTGTCCCTGGTAGCCTTTCTCATGCTCATCTTCTCACT-GTG  948
      | |||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTTTCACAGTGTCCCTGGTAGCCTTTCTCATGCTCATCTTCTCACTGGTG  950

seq1  GAAGCATCAC-AAAAAGATGCAGGTCAATG-CCAAACCACCTAGAGATGC  996
      |||||||||| ||||||||||||||||||| |||||||||||||||||||
seq2  GAAGCATCACAAAAAAGATGCAGGTCAATGCCCAAACCACCTAGAGATGC  1000

seq1  CAGCACCATGGCCCACATTAAAGCCTTGCAAACAGGGTTCTCCTTCCTGC  1046
      ||||||||||||||||| ||||| ||||||||||||||||||    ||||
seq2  CAGCACCATGGCCCACA-TAAAG-CTTGCAAACAGGGTTCTC---TCTGC  1045

seq1  TGCTGTATGCAGT-ATACTTACTTTTTATTGTCATAGGAATGTTGAGCCT  1095
      ||||| ||||||| |||||||||||||||||||||||  |||||||| ||
seq2  TGCTG-ATGCAGTAATACTTACTTTTTATTGTCATAG--ATGTTGAG-CT  1091

seq1  TAGGTTGATAGGAGGAAAATTAATACTTTTA-TTTGACCA  1134
       || | |||||||| ||   | ||||||||| ||||||||
seq2  AAGTTGGATAGGAGCAA---TTATACTTTTATTTTGACCA  1128