BAC Information

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BAC

Clone NameB6Ng01-186N21
Chromosome6 (Build37)
Map Location 125,624,410 - 125,624,863
singlet/doubletsinglet
Overlap geneVwf
Upstream geneMboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2, Lrrc23, Spsb2, Tpi1, Usp5, Cdca3, Gnb3, Leprel2, Gpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9
Downstream geneTmem16b, Ntf3, LOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186N21.bB6Ng01-186N21.g
ACCGA011600GA011601
length758466
definitionB6Ng01-186N21.b B6Ng01-186N21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccaaagccttggttccaatcacacaagtacactttgcatcatg
tgtcaatgctccacacagcaccaacaggtactaaacaaatcacctcattg
ggactggagacttgtggttggtgctttgctttgctttgctttgctttgct
ttgctttgctttgctttgctttgctttgctttgctttgctttgctttgct
ttgctttgctttgctttgctttgctttgattgggggaaacaatgggttgg
ttttttctatatatacacaattttctgttcttatataaacaaaatggctc
catgatggaaaacaaagaattttaatattgtactcagcctataaggaatc
aaattagtgtatctttggaatgtgttgtgttagtatgtgcaatttttaaa
atggctgtgttgccgacttgactttcattttcatccactaaatgagttta
attgggatcaggacagagttcagtattctaatgatataatatactctgct
atttgtaccacgtattatatgaagtaatgttctcagcattgatgattatc
aactctgatatgttgaagatgttctatgacatacagcatccatagtcagc
taagatgaattcctatgaatttcttcatgtaatgaacaataacatccatt
catacatatataatatatccaagtcacacagttaggtatgatatctctgg
tgagaagttaacagccctgattacgtgcatgctctctctctctctctaca
cactacac
gaattcacttcagtagaaactttcccgatggtgtgagagaagaggagaaa
cttacgcttcaaggaaccaaacagtcaattcataaagttcctcagctggt
ttcgcaggtctagatttagcgttttgttaggtcgtgggcccctctctctt
gttcggtcgttcctgtctcctctggcctgcagaattccttccaagaactc
agagcagcagcttggtcagctgtgatccccaggtggtcacttctgatggt
atagcgagccattgcccttaagttattatttttattgttatcctttgaca
gttctgtacatttatagaatgaattttagtcagtgtcatgtcttgttctc
atctctcctctcccctcacccaccagagcccttcttaatatgcctccctc
ctattttcatgcctctctctctctctctctctctctctctctctctctct
ctctatatgtcggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_125624410_125624863
seq2: B6Ng01-186N21.g_64_517

seq1  GAATTCACTTCAGTAGAAACTTTCCCGATGGTGTGAGAGAAGAGGAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCAGTAGAAACTTTCCCGATGGTGTGAGAGAAGAGGAGAAA  50

seq1  CTTACGCTTCAAGGAACCAAACAGTCAATTCATAAAGTTCCTCAGCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGCTTCAAGGAACCAAACAGTCAATTCATAAAGTTCCTCAGCTGGT  100

seq1  TTCGCAGGTCTAGATTTAGCGTTTTGTTAGGTCGTGGGCCCCTCTCTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGCAGGTCTAGATTTAGCGTTTTGTTAGGTCGTGGGCCCCTCTCTCTT  150

seq1  GTTCGGTCGTTCCTGTCTCCTCTGGCCTGCAGAATTCCTTCCAAGAACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGGTCGTTCCTGTCTCCTCTGGCCTGCAGAATTCCTTCCAAGAACTC  200

seq1  AGAGCAGCAGCTTGGTCAGCTGTGATCCCCAGGTGGTCACTTCTGATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGCAGCTTGGTCAGCTGTGATCCCCAGGTGGTCACTTCTGATGGT  250

seq1  ATAGCGAGCCATTGCCCTTAAGTTATTATTTTTATTGTTATCCTTTGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCGAGCCATTGCCCTTAAGTTATTATTTTTATTGTTATCCTTTGACA  300

seq1  GTTCTGTACATTTATAGAATGAATTTTAGTCAGTGTCATGTCTTGTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTACATTTATAGAATGAATTTTAGTCAGTGTCATGTCTTGTTCTC  350

seq1  ATCTCTCCTCTCCCCTCACCCACCAGAGCCCTTCTTAATATGCCTCCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCTCTCCCCTCACCCACCAGAGCCCTTCTTAATATGCCTCCCTC  400

seq1  CTATTTTCATGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCATGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  450

seq1  CTCT  454
      ||||
seq2  CTCT  454