BAC Information

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BAC

Clone NameB6Ng01-189F07
Chromosome6 (Build37)
Map Location 38,132,621 - 38,291,332
singlet/doubletdoublet
Overlap geneD630045J12Rik, LOC665125, Zc3hav1l, Zc3hav1
Upstream geneDgki, Creb3l2, Akr1d1, LOC665046, Ybx1-ps2, LOC100039636, LOC665102, Trim24, Svopl, Atp6v0a4, LOC100039657, D630002J15Rik
Downstream geneRpl30-ps1, Ttc26, D130059P03Rik, 3110054G05Rik, 1110001J03Rik, LOC621228, Luc7l2, Klrg2, LOC665180, Hipk2, Tbxas1, 1700025N23Rik, Parp12, 4930599N23Rik, A630082K20Rik, Slc37a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189F07.bB6Ng01-189F07.g
ACCGA013384GA013385
length7191,089
definitionB6Ng01-189F07.b B6Ng01-189F07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,290,614 - 38,291,332)(38,132,621 - 38,133,703)
sequence
gaattcactctgtagaccaggctggcctcgaactcagaaatctgcctgcc
tctgtctcccgagtactggaattaaaggtgagcaccaccactgcccagct
tctttttcttttttttttttttttttttaatatggagacagaggcatgca
gatcaccatgagtttgaaaccagcctggttgattttatctgtatagtgag
accctgttgttgtttgttgtttaaagtatatatttgtgtatgtgcaatca
aactgaggtcactgggtttgttggcaaacatttaccattacccaggatgt
catctggctgggccagtggacctcataaaattgtattctttctgtaggat
tgattagtctgtgttaattaccaaaggatacagcatttgatctttgctga
gtgaaagtttagtgaacttttcctttttaatctacttcacacatgctaag
caggtggtctaccactgaagttgaactcagtcttttaggctggcgtatgg
aatgatggatttcagtatggtgttttcacatctccatgccctgccggttt
gttcccttctcccaaggcccttccctgctcccctgcaccctcttggtacc
ctccccctttttaaaagatttattttatgtatgtgagtatgctattgctc
tcttcagacacactagaagagggcatcagatcccatttatggtggttgtg
agccaccatgtggttgctg
gaattctctcatcaggagatggggctgacacagaagcaacctccacagcc
taagggaacagccaggccagcatctaaaattaactcagttctccatcctc
accaccagccaaccacctactaaccctgggcctgaagacacagaaaaaca
gcgcaaaagccaagcacaaagactggcatacagaacaatacttcccagaa
gacagacatgtgtaagaacaacatagaagaaaaccttttaaaatcctact
taatatcccgagagaccctgaaggtcactctctcacatcttggcaaaagt
tataatgaaaaaggaacaaagagccacggggaaaatgactactcagaaac
ttgagtatgaatggacacggctgaaggcaaaattagtgactcggaggaca
gactttccaaaatttctaacggagaacggaaagatccttaccgcacgagg
aaaatgaaggagcacaaagtctagagttaacagtcatgtcagaaagggag
cagagagcgggaggggtcataaaacaccagcactttgaacagaatacgcg
tgaagccagcctgccgatcaacagaatcctctacgttcagacagagatgc
tgcagcccaaagagcccctcggacacagggagagcgtccctggcgtacag
accaaagtgcaccaaagtccaaaacttcagagcatcgtaccaatgcccag
acggttctaggttttggatcatttcctattttcaggttagaaaaacccaa
tgagtaaagtctatgcaacatattccaaataaatccaaacgtcctgtctc
ctcaaacgacccagcaccaagcctttgagattcaggctatccgacctgct
gggaaaagcaaagtgtgctcaggcactgcctcactgactgtgcagcttat
gtcactcctatgtgggaacattcttgactttgcctgcatatgaccatctc
tctctaactctctctgactagggtgagttgccccgatttggccgtccact
ctgagtcatgctgtagaccccacacctttgccaaaggtcagcctgggccc
acacgggcttctctccattggaggacataatctcacccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_38290614_38291332
seq2: B6Ng01-189F07.b_42_760 (reverse)

seq1  CAGCAACCACATGGTGGCTCACAACCACCATAAATGGGATCTGATGCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACCACATGGTGGCTCACAACCACCATAAATGGGATCTGATGCCCT  50

seq1  CTTCTAGTGTGTCTGAAGAGAGCAATAGCATACTCACATACATAAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGTGTGTCTGAAGAGAGCAATAGCATACTCACATACATAAAATAA  100

seq1  ATCTTTTAAAAAGGGGGAGGGTACCAAGAGGGTGCAGGGGAGCAGGGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTAAAAAGGGGGAGGGTACCAAGAGGGTGCAGGGGAGCAGGGAAG  150

seq1  GGCCTTGGGAGAAGGGAACAAACCGGCAGGGCATGGAGATGTGAAAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTGGGAGAAGGGAACAAACCGGCAGGGCATGGAGATGTGAAAACAC  200

seq1  CATACTGAAATCCATCATTCCATACGCCAGCCTAAAAGACTGAGTTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGAAATCCATCATTCCATACGCCAGCCTAAAAGACTGAGTTCAAC  250

seq1  TTCAGTGGTAGACCACCTGCTTAGCATGTGTGAAGTAGATTAAAAAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGGTAGACCACCTGCTTAGCATGTGTGAAGTAGATTAAAAAGGAA  300

seq1  AAGTTCACTAAACTTTCACTCAGCAAAGATCAAATGCTGTATCCTTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCACTAAACTTTCACTCAGCAAAGATCAAATGCTGTATCCTTTGGT  350

seq1  AATTAACACAGACTAATCAATCCTACAGAAAGAATACAATTTTATGAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAACACAGACTAATCAATCCTACAGAAAGAATACAATTTTATGAGGT  400

seq1  CCACTGGCCCAGCCAGATGACATCCTGGGTAATGGTAAATGTTTGCCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGCCCAGCCAGATGACATCCTGGGTAATGGTAAATGTTTGCCAAC  450

seq1  AAACCCAGTGACCTCAGTTTGATTGCACATACACAAATATATACTTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGTGACCTCAGTTTGATTGCACATACACAAATATATACTTTAAA  500

seq1  CAACAAACAACAACAGGGTCTCACTATACAGATAAAATCAACCAGGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACAACAACAGGGTCTCACTATACAGATAAAATCAACCAGGCTGG  550

seq1  TTTCAAACTCATGGTGATCTGCATGCCTCTGTCTCCATATTAAAAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAACTCATGGTGATCTGCATGCCTCTGTCTCCATATTAAAAAAAAA  600

seq1  AAAAAAAAAAAGAAAAAGAAGCTGGGCAGTGGTGGTGCTCACCTTTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGAAAAAGAAGCTGGGCAGTGGTGGTGCTCACCTTTAATT  650

seq1  CCAGTACTCGGGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACTCGGGAGACAGAGGCAGGCAGATTTCTGAGTTCGAGGCCAGCC  700

seq1  TGGTCTACAGAGTGAATTC  719
      |||||||||||||||||||
seq2  TGGTCTACAGAGTGAATTC  719

seq1: chr6_38132621_38133703
seq2: B6Ng01-189F07.g_65_1153

seq1  GAATTCTCTCATCAGGAGATGGGGCTGACACAGAAGCAACCTCCACAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCATCAGGAGATGGGGCTGACACAGAAGCAACCTCCACAGCC  50

seq1  TAAGGGAACAGCCAGGCCAGCATCTAAAATTAACTCAGTTCTCCATCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGAACAGCCAGGCCAGCATCTAAAATTAACTCAGTTCTCCATCCTC  100

seq1  ACCACCAGCCAACCACCTACTAACCCTGGGCCTGAAGACACAGAAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCAGCCAACCACCTACTAACCCTGGGCCTGAAGACACAGAAAAACA  150

seq1  GCGCAAAAGCCAAGCACAAAGACTGGCATACAGAACAATACTTCCCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAAAAGCCAAGCACAAAGACTGGCATACAGAACAATACTTCCCAGAA  200

seq1  GACAGACATGTGTAAGAACAACATAGAAGAAAACCTTTTAAAATCCTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACATGTGTAAGAACAACATAGAAGAAAACCTTTTAAAATCCTACT  250

seq1  TAATATCCCGAGAGACCCTGAAGGTCACTCTCTCACATCTTGGCAAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCCCGAGAGACCCTGAAGGTCACTCTCTCACATCTTGGCAAAAGT  300

seq1  TATAATGAAAAAGGAACAAAGAGCCACGGGGAAAATGACTACTCAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGAAAAAGGAACAAAGAGCCACGGGGAAAATGACTACTCAGAAAC  350

seq1  TTGAGTATGAATGGACACGGCTGAAGGCAAAATTAGTGACTCGGAGGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATGAATGGACACGGCTGAAGGCAAAATTAGTGACTCGGAGGACA  400

seq1  GACTTTCCAAAATTTCTAACGGAGAACGGAAAGATCCTTACCGCACGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTCCAAAATTTCTAACGGAGAACGGAAAGATCCTTACCGCACGAGG  450

seq1  AAAATGAAGGAGCACAAAGTCTAGAGTTAACAGTCATGTCAGAAAGGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAGGAGCACAAAGTCTAGAGTTAACAGTCATGTCAGAAAGGGAG  500

seq1  CAGAGAGCGGGAGGGGTCATAAAACACCAGCACTTTGAACAGAATACGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCGGGAGGGGTCATAAAACACCAGCACTTTGAACAGAATACGCG  550

seq1  TGAAGCCAGCCTGCCGATCAACAGAATCCTCTACGTTCAGACAGAGATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCAGCCTGCCGATCAACAGAATCCTCTACGTTCAGACAGAGATGC  600

seq1  TGCAGCCCAAAGAGCCCCTCGGACACAGGGAGAGCGTCCCTGGCGTACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCCAAAGAGCCCCTCGGACACAGGGAGAGCGTCCCTGGCGTACAG  650

seq1  ACCAAAGTGCACCAAAGTCCAAAACTTCAGAGCATCGTACCAATGCCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGTGCACCAAAGTCCAAAACTTCAGAGCATCGTACCAATGCCCAG  700

seq1  ACGGTTCTAGGTTTTGGATCATTTCCTATTTTCAGGTTAGAAAAACCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTCTAGGTTTTGGATCATTTCCTATTTTCAGGTTAGAAAAACCCAA  750

seq1  TGAGTAAAGTCTATGCAACATATTCCAAATAAATCCAAACGTCCTGTCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAAAGTCTATGCAACATATTCCAAATAAATCCAAACGTCCTGTCTC  800

seq1  CTCAAACGACCCAGCACCAAGCCTTTGAGATTCAGGCTATCCGACCTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACGACCCAGCACCAAGCCTTTGAGATTCAGGCTATCCGACCTGCT  850

seq1  -GGAAAAGCAAAGTGTGCTCAGGCACTGCCTCACTGACTGTGCAGCTAAT  899
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GGGAAAAGCAAAGTGTGCTCAGGCACTGCCTCACTGACTGTGCAGCTTAT  900

seq1  GTCACTCCTATGT-GGAACATTCTTGAC-TTGCCTGCATATGACCATCTC  947
      ||||||||||||| |||||||||||||| |||||||||||||||||||||
seq2  GTCACTCCTATGTGGGAACATTCTTGACTTTGCCTGCATATGACCATCTC  950

seq1  TCTCTAACTCTCTCTGACTAGGGTGAGTTGCCCCGATTT-GCCGT-CACT  995
      ||||||||||||||||||||||||||||||||||||||| ||||| ||||
seq2  TCTCTAACTCTCTCTGACTAGGGTGAGTTGCCCCGATTTGGCCGTCCACT  1000

seq1  CTGAAGTCATGCTGTAGACCCCACACC-TTGCCAAAGGTCAGCCCTGGCC  1044
      ||| ||||||||||||||||||||||| ||||||||||||||||  ||||
seq2  CTG-AGTCATGCTGTAGACCCCACACCTTTGCCAAAGGTCAGCCTGGGCC  1049

seq1  CACAC-GGCTTCTCTCCATTGGAGGACAT-ATCTCCACCCC  1083
      ||||| ||||||||||||||||||||||| |||| ||||||
seq2  CACACGGGCTTCTCTCCATTGGAGGACATAATCT-CACCCC  1089