BAC Information

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BAC

Clone NameB6Ng01-191M23
Chromosome6 (Build37)
Map Location 134,811,764 - 134,812,857
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043655, LOC100043656, LOC668063, Etv6, LOC100043660, Bcl2l14, Lrp6, Mansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2
Downstream geneGpr19, Cdkn1b, 1190002F15Rik, Apold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1, Pbp2, LOC100043890, Emp1, Grin2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-191M23.bB6Ng01-191M23.g
ACCGA015211GA015212
length1,2111,124
definitionB6Ng01-191M23.b B6Ng01-191M23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagtcatcttgggccagagagagagaggaatacacaagccttg
cagggtctgtctctctgtctctgtctgtctctctctgtctctgtctctgt
ctctgtctctctctctctctcacacacacacacacacacatacacacaca
catctatctgcagtcctgctaggcacaccaactccatacaaactcagaca
caatccaaaacgcttcaggaggctacgtgcttggcctgccctggtggatg
gtgcacatagagtcataaggtcagaagcttctcccatggctagcctgtag
atctcatctgtatcctttgcagcagcctttataacaaatgcagagacatt
tccccgactcctgggagtcagtcctgacaggaaagggtgagaacacccag
tttatagcagagaaattagaaacacagatctagcacccagggaccagact
gataaacaagtgatggtgatccgtttggaattctgggctctctcaatcca
tgggatgtgatattgtctccaggtagatggtgtaagatttgagttaaatc
acaggtcacttcccgggcttccactgtgatactgctggcttgatggtgca
gaggaagatccacaccttttgaattcagagctccattgtgttgatttttg
tgttgtgagattaaaacatgaatatacatttagtgaggagtcatggcaca
gggtccttacactgtagcctaagctgggtcttaaaatcatggtagtctcc
ctacctcagcctccagagcattagaaaagtgagagccaccatgcctggct
aggaacatcatgtgtttaaatacttggccatagggagtggcactattagg
aggtgtggccctgttgcagtaagcaggctttggaggaagtgttttgctgt
gggggtaggctttgaagtcacttatgctcaagctacagccagtgtggcag
accatctcctgctgcctcggatggagatgtaactctcagcttgttctcag
caccatgtctgcctgcacactgccatgttttcttcttgccatgaataata
caatggactgatctgggctgctgagatgctcaagtgggttaagagcaccc
agtttgctcttccggatgcccgatcaattcaagcaacccaagtgggtgtc
caaaacaatcctaacagatctgatctcccttctgggaagttctgtgcagg
accacgactac
gaattcattaaacagggggtgggtacaggccaacttgaagcacagagcag
ggaaggctgtcatcagacccttgtcaatcttctgcactttcttttctcaa
tgagcctggaaatcactggtttcccgccatcaggttccagggatctcctg
tggccacctatccagtgctgggtttagagatgggaaccagagccaggttg
ccatgactacataaaagaacagtatccaccttactgcagcgtctctggaa
cgtttccctaaaggagcatcagtcttctgcatctacgctttggttagtaa
agtgctggaaggccatgtcgactgttgcatgctccaaaccacatgatgtc
ctccgacctccaggtctgcctcctcagcctgcgtttggtcaccctgggga
gctaaaatcccacgtccttcaagtatgaaggcaatccaaactctgtaacg
tctactgtataactcagagctgatggagtcagtcactaaagcaatacctt
tgttttgacttggtttggtttggtttttgttttcccacacactcctgtag
ccaatcctggccttgaattcctaactctcttgtctgtacctcccacatgc
tggggttatagacatgggtttagataagggttataatagacacacacaca
cacacacacacacacacacacgcgcgcgcgccacagcatgcatagagatc
agagttcaaacgatgggaatctgttttctccttccaccttgtgggtttag
gggaccaaactcaggagccaggctcagtgtcaagcacccttaaacactga
atcatctcactgggactccaaaaacccttcttaaaagaggcttctgcgaa
agaatagatagcactttcttgacatgtccacactttgggaaaagtccaga
acctaccagattgtagcagctcaaaaaaaattaaagaagggtcttgagaa
ggcctgaggtcagtgagaacctggctttgcaagtggaatttcctttccac
aaccaaggtcaaattgtcttgtttaaccctgccacatgcgcacccaactt
caaggggaaggcttgtattgcccattggaagactctggccatgttctttc
tgaatcctaattatgaaaagcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134811764_134812857
seq2: B6Ng01-191M23.g_67_1190

seq1  GAATTCATTAAACAGGGGGTGGGTACAGGCCAACTTGAAGCACAGAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAACAGGGGGTGGGTACAGGCCAACTTGAAGCACAGAGCAG  50

seq1  GGAAGGCTGTCATCAGACCCTTGTCAATCTTCTGCACTTTCTTTTCTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCTGTCATCAGACCCTTGTCAATCTTCTGCACTTTCTTTTCTCAA  100

seq1  TGAGCCTGGAAATCACTGGTTTCCCGCCATCAGGTTCCAGGGATCTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCTGGAAATCACTGGTTTCCCGCCATCAGGTTCCAGGGATCTCCTG  150

seq1  TGGCCACCTATCCAGTGCTGGGTTTAGAGATGGGAACCAGAGCCAGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACCTATCCAGTGCTGGGTTTAGAGATGGGAACCAGAGCCAGGTTG  200

seq1  CCATGACTACATAAAAGAACAGTATCCACCTTACTGCAGCGTCTCTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGACTACATAAAAGAACAGTATCCACCTTACTGCAGCGTCTCTGGAA  250

seq1  CGTTTCCCTAAAGGAGCATCAGTCTTCTGCATCTACGCTTTGGTTAGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCCCTAAAGGAGCATCAGTCTTCTGCATCTACGCTTTGGTTAGTAA  300

seq1  AGTGCTGGAAGGCCATGTCGACTGTTGCATGCTCCAAACCACATGATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGGAAGGCCATGTCGACTGTTGCATGCTCCAAACCACATGATGTC  350

seq1  CTCCGACCTCCAGGTCTGCCTCCTCAGCCTGCGTTTGGTCACCCTGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGACCTCCAGGTCTGCCTCCTCAGCCTGCGTTTGGTCACCCTGGGGA  400

seq1  GCTAAAATCCCACGTCCTTCAAGTATGAAGGCAATCCAAACTCTGTAACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAATCCCACGTCCTTCAAGTATGAAGGCAATCCAAACTCTGTAACG  450

seq1  TCTACTGTATAACTCAGAGCTGATGGAGTCAGTCACTAAAGCAATACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGTATAACTCAGAGCTGATGGAGTCAGTCACTAAAGCAATACCTT  500

seq1  TGTTTTGACTTGGTTTGGTTTGGTTTTTGTTTTCCCACACACTCCTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGACTTGGTTTGGTTTGGTTTTTGTTTTCCCACACACTCCTGTAG  550

seq1  CCAATCCTGGCCTTGAATTCCTAACTCTCTTGTCTGTACCTCCCACATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCCTGGCCTTGAATTCCTAACTCTCTTGTCTGTACCTCCCACATGC  600

seq1  TGGGGTTATAGACATGGGTTTAGATAAGGGTTATAATAGACACACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTATAGACATGGGTTTAGATAAGGGTTATAATAGACACACACACA  650

seq1  CACACACACACACACACACACGCGCGCGCGCCACAGCATGCATAGAGATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACGCGCGCGCGCCACAGCATGCATAGAGATC  700

seq1  AGAGTTCAAACGATGGGAATCTGTTTTCTCCTTCCACCTTGTGGGTTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCAAACGATGGGAATCTGTTTTCTCCTTCCACCTTGTGGGTTTAG  750

seq1  GGGACCAAACTCAGGAGCCAGGCTCAGTGTCAAGCACCCTTAAACACTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCAAACTCAGGAGCCAGGCTCAGTGTCAAGCACCCTTAAACACTGA  800

seq1  ATCATCTCACT-GGACTCCAAAAACCC-TCTTAAAAGAGGCTTCTGCGAA  848
      ||||||||||| ||||||||||||||| ||||||||||||||||||||||
seq2  ATCATCTCACTGGGACTCCAAAAACCCTTCTTAAAAGAGGCTTCTGCGAA  850

seq1  AGAATAGATAGCAC-TTCTTGACATGTCCACAC-TTGGGAAAAGTCCAGA  896
      |||||||||||||| |||||||||||||||||| ||||||||||||||||
seq2  AGAATAGATAGCACTTTCTTGACATGTCCACACTTTGGGAAAAGTCCAGA  900

seq1  ACCTACCAGATTGTAGCAGCTC-AAAAAAATTAAAG-AGGGTC-TGAG-A  942
      |||||||||||||||||||||| ||||||||||||| |||||| |||| |
seq2  ACCTACCAGATTGTAGCAGCTCAAAAAAAATTAAAGAAGGGTCTTGAGAA  950

seq1  GGCCTGAGGTCAGTGAGA--CCGGC-CTGC-AGT-GAATT--CCTTCCAC  985
      ||||||||||||||||||  | |||  ||| ||| |||||  | ||||||
seq2  GGCCTGAGGTCAGTGAGAACCTGGCTTTGCAAGTGGAATTTCCTTTCCAC  1000

seq1  -ACCAA-GTCAAATTGTC-TGTTTAACCCTG-CACATGCGCACCC-ACT-  1029
       ||||| ||||||||||| |||||||||||| ||||||||||||| ||| 
seq2  AACCAAGGTCAAATTGTCTTGTTTAACCCTGCCACATGCGCACCCAACTT  1050

seq1  -CAGGGGAAAGCGTGTATTG-CCAT--GGAGACATCTG--CATGTCC--T  1071
        ||||||| || ||||||| ||||  | |||| ||||  ||||| |  |
seq2  CAAGGGGAAGGCTTGTATTGCCCATTGGAAGAC-TCTGGCCATGTTCTTT  1099

seq1  CTGAA-CCTAATTATG-AAAGCAGC  1094
      ||||| |||||||||| ||||||||
seq2  CTGAATCCTAATTATGAAAAGCAGC  1124