BAC Information

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BAC

Clone NameB6Ng01-194J19
Chromosome6 (Build37)
Map Location 19,211,876 - 19,212,579
singlet/doubletsinglet
Overlap genenone
Upstream geneCftr, Cttnbp2, EG545829, Lsm8, Ankrd7, LOC626180
Downstream geneEif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-194J19.bB6Ng01-194J19.g
ACCGA017258GA017259
length770973
definitionB6Ng01-194J19.b B6Ng01-194J19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcactaaacccatctggtcctgggctttttaatttatttattt
gtttttaattttctttaaatttttatttatttatatatttttggttgaga
gacttttaatgagtttctacttctttaggggttatgtgactatttagatg
gtttatctgatcacgatttaactttggcacatgatatctgtctagaaaat
tgtccatttcatccagattttccagttatgttgagtacaggcttttgtag
taggatctgatgactttttttcttttaatttcctcattttctgttgttat
atctcccttctcttttctgattttattaaattggatactgtctgtgtgcc
ctctggttactctggctaaggctttatctattttgttgattttgtcaaag
aactagctcctggtttggttgattattgttatagttctttttgtttttac
ttgattaatttcagccctaggtttgattgtttcctgctgtcgactcatct
tgcatttatttgcttctctttgttttagaacctttaggtgtgctgttaag
atgctagtgtatttctgttaaatgggatttctgtgtgtatgaatgtgtgt
gagtctcagtgtatatatgtttctcatgatttttctttggctctttttct
tctgtcccattcttggtttttgttttattttatcttattttattttattt
ttgataccttttcattttctagtgagagataaaaaaggatgtggtttaca
ggtgggaaagggaagtggaa

gaattctagaaagtctttaatttatttccccttaacccagtggttctaca
gtagagagtggttcagtttccatgagcttgtaggctttcttttgtttttg
tttttgtttttgttcaagtctaggtttaattactgttaatctcatgagat
acaaaaggttatttcaaacttctcgtatctgttgatgtttgctttgtgat
ggattatatggtcaattttggaggagtttccatgaggtcctaagaagata
tgtccttatatgtttgaatgaattgttctatagatgtctgttaggtcaat
ttgattgatagcctatgttagtttcattattttcctgtttatattttgtc
tggatgacctgtctattggtgagtgtgggttgctgaagtctctcactatt
aatgtgtggagttcattgtgtgatttaagctttaggagtgtttcttttat
gtatatgtgttgtgtccagatactgggggcaagtaaggaagcctgagcct
ttgcttgagtttagagacttgtcttgttcacttttgtactggagtgactc
ggctcttcctgtttaagcctgcatttgcctagctaccactggtgtgtcaa
tttcttataggccccatgatatacacccacaccccttgtcatctcacacc
atcccatacatcatctcacataccctcagttactcttccccacccactgc
gtcatccttcctcaccaaaaatgaaataaaacaatagacaaaatacaaat
aaaaataagcatacaagtttgggccacctagggtatatccaccctgtttc
acataatctctttgacgttgaatgtctgtttctggtcatacctttttttt
tttttttaatttttttattaggtatttcctcggtttacattttcaaatgc
tatcccaaaggtccccatattcacccccccattccctagcacccactccc
ccttttggtcctggctttcccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19211876_19212579
seq2: B6Ng01-194J19.b_111_817

seq1  TTTAAATTTTTATTTATTTATATATTTTTGGTTGAGAGACTTTTAATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTTATTTATTTATATATTTTTGGTTGAGAGACTTTTAATGAG  50

seq1  TTTCTACTTCTTTAGGGGTTATGTGACTATTTAGATGGTTTATCTGATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTTCTTTAGGGGTTATGTGACTATTTAGATGGTTTATCTGATCA  100

seq1  CGATTTAACTTTGGCACATGATATCTGTCTAGAAAATTGTCCATTTCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTAACTTTGGCACATGATATCTGTCTAGAAAATTGTCCATTTCATC  150

seq1  CAGATTTTCCAGTTATGTTGAGTACAGGCTTTTGTAGTAGGATCTGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTTCCAGTTATGTTGAGTACAGGCTTTTGTAGTAGGATCTGATGA  200

seq1  CTTTTTTTCTTTTAATTTCCTCATTTTCTGTTGTTATATCTCCCTTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTCTTTTAATTTCCTCATTTTCTGTTGTTATATCTCCCTTCTCT  250

seq1  TTTCTGATTTTATTAAATTGGATACTGTCTGTGTGCCCTCTGGTTACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATTTTATTAAATTGGATACTGTCTGTGTGCCCTCTGGTTACTCT  300

seq1  GGCTAAGGCTTTATCTATTTTGTTGATTTTGTCAAAGAACTAGCTCCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAGGCTTTATCTATTTTGTTGATTTTGTCAAAGAACTAGCTCCTGG  350

seq1  TTTGGTTGATTATTGTTATAGTTCTTTTTGTTTTTACTTGATTAATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTGATTATTGTTATAGTTCTTTTTGTTTTTACTTGATTAATTTCA  400

seq1  GCCCTAGGTTTGATTGTTTCCTGCTGTCGACTCATCTTGCATTTATTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAGGTTTGATTGTTTCCTGCTGTCGACTCATCTTGCATTTATTTGC  450

seq1  TTCTCTTTGTTTTAGAACCTTTAGGTGTGCTGTTAAGATGCTAGTGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTGTTTTAGAACCTTTAGGTGTGCTGTTAAGATGCTAGTGTATT  500

seq1  TCTGTTAAATGGGATTTCTGTGTGTATGAATGTGTGTGAGTCTCAGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTAAATGGGATTTCTGTGTGTATGAATGTGTGTGAGTCTCAGTGTA  550

seq1  TATATGTTTCTCATGATTTTTCTTTGGCTCTTTTTCTTCTGTCCCATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTTCTCATGATTTTTCTTTGGCTCTTTTTCTTCTGTCCCATTCT  600

seq1  TGGTTTTTGTTTTATTTTATCTTATTTTATTTTATTTTTGATACCTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTGTTTTATTTTATCTTATTTTATTTTATTTTTGATACCTTTTC  650

seq1  ATTTTCTAGTGAGAGAT-AAAAAGGATGTGG-TTACAGGTGGG-AAGGGA  697
      ||||||||||||||||| ||||||||||||| ||||||||||| ||||||
seq2  ATTTTCTAGTGAGAGATAAAAAAGGATGTGGTTTACAGGTGGGAAAGGGA  700

seq1  GGTGGAA  704
       ||||||
seq2  AGTGGAA  707


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