BAC Information

Click to search

BAC

Clone NameB6Ng01-197G16
Chromosome6 (Build37)
Map Location 76,043,384 - 76,044,209
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145
Downstream geneEG546907, LOC100042952, LOC668153, EG668155, LOC100042956, Ctnna2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-197G16.bB6Ng01-197G16.g
ACCGA019287GA019288
length1,223830
definitionB6Ng01-197G16.b B6Ng01-197G16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgggctaagaggggagatcttcacattctctccaataactgtt
tggtgcagggcataggaacagtgtagcagctgggataggatctatctgct
caccatctgtacctggagcttggtctgttccacggctctctgtacatagg
tcctgccaggaaagagctggtctccctggagtgatctcactcctgggctt
agagttgatatagccatattctctacaatatctgtacagtgcgagaccag
tgaggagcacacatggcacaagaacagtggagcagctgggaaaggatcct
tctggttaccatctgtaccctgagcttggggtgttccagagacaactgta
tacaaggtccaccaggagagagctggtctcccaggtgtgctgacacaggc
ttacaggtccacaggagggacaaggtccagccagacacatcaagactaac
taacaccagagataacctgagatggcaaaggaaagcaaaataaccttacc
aacagaaaccaaggctacttggcattatgagaacccagttctcccaccac
agcaagtcctggatactccaacacgtcagaaaagaaagatttggatttaa
aatcacatatcatgatgctgatagaaaattttaagaaggacataagtaac
tcccttaaagaaatacaggagaacacaggtaaagaggtagaaggccttaa
agaggaaacataaaatcccttaaagaattacatgaaaacacaaccaaaca
ggtgaaggaagtgaacaaaaccatgcaggatctaaaaatgggaagtaaaa
ataataaagaaatcacaaagagagagaactttggagatagaaaatctagg
aaagcgatcaggaaacacagatgcaatggaatacagaaaacagaatacaa
aatattaggtacagaagataccatagaaatcatttgaccacaacagttca
aagaatcgtggcataattcaaaaaggacctaacccaaattccaggtctac
acgagaagaactaaaccttaaggataatagaagagagcaaggattccaaa
ttaagggccagtcaatatctttccaacaaaaggtatatgaaggaaaatct
ttcctatacttaaagaaagattgaccaatgaacattaaaggtagctattg
cacccccaaatgaatggacgaaagatctccatactattatcaaccccagt
accaagaaatctatatagaagac

gaattcatagtttttatgaactttacttctcagtgatttgcgtggaaaca
ctttacttcagagttttttaatgtaataggtgtaaaatacacacatttat
gcaaatgtatttctcccttgaaacagaaaatagaaatacagacaagttat
attcatcataaaaatagacagaatattgttagtatcaaaatctagtgact
gacattcgaaatgttatattctatataaaataattcaactaactaaatct
tagattacatttgtatagattctaattgttttgcatgtgagagactcttt
attaacttttggtgttataatatccaaggtatcctttggaaataaataaa
ctctgagggatattgcagggtcaaggcaatcaaatatcaatggattttcc
cccacctatgtctgtatatatattttttctctctctcccatattgattat
gatagataggcacttttctttgtagtagaattaaaatattctgctgaatc
tctaacacttagcataaagtaactgcttaagggtaacatgccatggtatc
atattaattcatcctccttaataaaaacttcagcaattcagagcagaaat
agttgcttgaaatatgtccttcaatcaattctctcaaattgactgaagat
atataggactctgaactgtggaagaagaatatgaattttgtgaagatgca
cattatttttccaatataaagagaaaggaagtaaaagaaggaagagagaa
gaaggagagaaggagggaagaaaggagagatggaaagatgggaagtaggg
aaagatggagcgaggagatggaagagaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_76043384_76044209
seq2: B6Ng01-197G16.g_69_898 (reverse)

seq1  CTTTCTC-TCCATCTCCTCGCTCCATCTTTCCCTACTTCCCATC-TTCCA  48
      ||||||| |||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTCTCTTCCATCTCCTCGCTCCATCTTTCCCTACTTCCCATCTTTCCA  50

seq1  TCTCTCC-TTCTTCCCTCCTTCTCTCCTTCTTCTCTCTTCCTTC-TTTAC  96
      ||||||| |||||||||||||||||||||||||||||||||||| |||||
seq2  TCTCTCCTTTCTTCCCTCCTTCTCTCCTTCTTCTCTCTTCCTTCTTTTAC  100

seq1  TTCCTTTCTCTTTATATTGGAAAAATAATGTGCATCTTCACAAAATTCAT  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCTCTTTATATTGGAAAAATAATGTGCATCTTCACAAAATTCAT  150

seq1  ATTCTTCTTCCACAGTTCAGAGTCCTATATATCTTCAGTCAATTTGAGAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTCTTCCACAGTTCAGAGTCCTATATATCTTCAGTCAATTTGAGAG  200

seq1  AATTGATTGAAGGACATATTTCAAGCAACTATTTCTGCTCTGAATTGCTG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATTGAAGGACATATTTCAAGCAACTATTTCTGCTCTGAATTGCTG  250

seq1  AAGTTTTTATTAAGGAGGATGAATTAATATGATACCATGGCATGTTACCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTATTAAGGAGGATGAATTAATATGATACCATGGCATGTTACCC  300

seq1  TTAAGCAGTTACTTTATGCTAAGTGTTAGAGATTCAGCAGAATATTTTAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAGTTACTTTATGCTAAGTGTTAGAGATTCAGCAGAATATTTTAA  350

seq1  TTCTACTACAAAGAAAAGTGCCTATCTATCATAATCAATATGGGAGAGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTACAAAGAAAAGTGCCTATCTATCATAATCAATATGGGAGAGAG  400

seq1  AGAAAAAATATATATACAGACATAGGTGGGGGAAAATCCATTGATATTTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAATATATATACAGACATAGGTGGGGGAAAATCCATTGATATTTG  450

seq1  ATTGCCTTGACCCTGCAATATCCCTCAGAGTTTATTTATTTCCAAAGGAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCTTGACCCTGCAATATCCCTCAGAGTTTATTTATTTCCAAAGGAT  500

seq1  ACCTTGGATATTATAACACCAAAAGTTAATAAAGAGTCTCTCACATGCAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGGATATTATAACACCAAAAGTTAATAAAGAGTCTCTCACATGCAA  550

seq1  AACAATTAGAATCTATACAAATGTAATCTAAGATTTAGTTAGTTGAATTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTAGAATCTATACAAATGTAATCTAAGATTTAGTTAGTTGAATTA  600

seq1  TTTTATATAGAATATAACATTTCGAATGTCAGTCACTAGATTTTGATACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATAGAATATAACATTTCGAATGTCAGTCACTAGATTTTGATACT  650

seq1  AACAATATTCTGTCTATTTTTATGATGAATATAACTTGTCTGTATTTCTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATTCTGTCTATTTTTATGATGAATATAACTTGTCTGTATTTCTA  700

seq1  TTTTCTGTTTCAAGGGAGAAATACATTTGCATAAATGTGTGTATTTTACA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTTCAAGGGAGAAATACATTTGCATAAATGTGTGTATTTTACA  750

seq1  CCTATTACATTAAAAAACTCTGAAGTAAAGTGTTTCCACGCAAATCACTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTACATTAAAAAACTCTGAAGTAAAGTGTTTCCACGCAAATCACTG  800

seq1  AGAAGTAAAGTTCATAAAAACTATGAATTC  826
      ||||||||||||||||||||||||||||||
seq2  AGAAGTAAAGTTCATAAAAACTATGAATTC  830


| Home | SequenceCutter | Blast | Download |