BAC Information

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BAC

Clone NameB6Ng01-199A06
Chromosome6 (Build37)
Map Location 109,111,487 - 109,112,655
singlet/doubletsinglet
Overlap genenone
Upstream geneSumf1, Itpr1, LOC677205, Bhlhb2, Arl8b, Edem1, EG627371
Downstream geneLOC639110, LOC100043720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-199A06.bB6Ng01-199A06.g
ACCGA020459GA020460
length9931,178
definitionB6Ng01-199A06.b B6Ng01-199A06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggattccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatcttttggtggtct
ttttgtcttattgacagtgtcttttgccttgcagaagctttgcagtttca
tgaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatctttgagggttttccccac
tttctcctcaataagtttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaatttgc
attcttttacatgataaccgccagttgtgccagcaccatttgttgaagat
gctgtcttttttccactgggtggtttttgctctccagaggaatggataca
gaaaatgtggtacatttacacaatggagtactactcagctattaaaaaga
atgaatttatgaaattcctaggcaaatggatggacctagaggatatcatc
ctgagtgaggtaaaccaatcacaaagaaactcacacaatatgtactcact
gataagtggatattagcccagaaacttaggatacccaatatataagatac
aatttgctaaacgcatgaaactcaagaagaacgaagaccaagtgtggaca
cgttgccccttcttagaatttgggaacaaaacactcatggaaggatttac
agagacaaagcttggagctatgtcaaaaggatggaccatcgagagcttgc
catatccagggttccattcccataatcagctttccaaacgctgacacatt
tgcatatactagcaagattttgcttgaaaaggaccccagatatagctgtc
ttcttgtgggaactatgccagggccctagcatgaacacagtag
gaattccatgtattgagagaatttgccaagagaagggtcaaacacagcgt
aactttaacaaaatggccccacctccatggccctttttcatttatactct
caactgtcatttataaaaaaccagagacagtctaagcacatctggacctt
acctagttattttacaatccagcaaagtacaattcccttgaagatgaagg
aatgaagggtagtaataggcatgcagctatttctcttatgtactaaacca
gaaagatctacaagatgtactgttgagttctttaactataatatggtgac
agaaatgcataaaatgctaccaattgaatgagaagaggggaaagtctatt
ctatctgtttatagatgcattaaaatctctatggaaggacataaaagaat
gtattgcctttactttagggaaacaaggagaatcaaaaagagagactcag
taagagatgatatttttgctcatgaagccttaaactttttattgctagaa
ttggtttgaatgttttatctgctcaaaacaaatggaagcccaaacaatta
ggcagattcatgacttgtgtagaaatgggttttttttatttcttctttca
ttctttctcatgtagaaatattatgaaaatatttgagggcttgattcata
attcccagaggtaggattctaatgaaagcttcttctctcaacaattcttt
attaagcacctaaaacatgagggtgatgggataggaacactcacgttgcc
ttgccagttaagagacctacatcaatgttgtgcatgtttctaagaaccca
aaaattgaatacccaagtcccagagagacagtcagtttgaatgtaaaata
agtttcatgaccagacccaaaaagatgcttaaaaattaatgttttcttaa
gtgtataaactctctataagaatctcataccttgaaggactggagagatg
tctcattgttaagaacaccatcttgctgtttttctataggacacaagttc
aagtcccatcaccccagaactcatagctcaataactcttgcactccaatt
ctgaggagaatctgatgcacctttccagctttcacagaatacccaatcca
tgtatcatacactctcgccagaactatacacctaatcatgactctaaaca
aggcataaataggaataattttaataac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109111487_109112655
seq2: B6Ng01-199A06.g_67_1244 (reverse)

seq1  GTTATTAAA--TA-TCCTA-TTATGCCTTGTTAGAAGTCATGGTTTTGGT  46
      |||||||||  || ||||| ||||||||||||   |||||| | || |||
seq2  GTTATTAAAATTATTCCTATTTATGCCTTGTTTAGAGTCAT-GATTAGGT  49

seq1  GTATATGTCT-GTGTGAGTGTATGATACAT-GAATGGGTA-TCTGTGGAG  93
      |||||  ||| | | ||||||||||||||| || |||||| |||||| | 
seq2  GTATAGTTCTGGCGAGAGTGTATGATACATGGATTGGGTATTCTGTGAAA  99

seq1  GCTGGAAGGGTGCATCAGA-TCTCC-CAGAATTGGAGTTGCAGGAGGTTA  141
      ||||||| ||||||||||| ||||| ||||||||||| |||| ||| |  
seq2  GCTGGAAAGGTGCATCAGATTCTCCTCAGAATTGGAG-TGCAAGAGTTAT  148

seq1  TGAGCTATGAGTTCT-GGGTGATGGGACTTGAACTTGTGTCCTATAGAAA  190
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGAGCTATGAGTTCTGGGGTGATGGGACTTGAACTTGTGTCCTATAGAAA  198

seq1  AACAGCAAGATGGTGTTCTTAACAATGAGACATCTCTCCAGTCC-TCAAG  239
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AACAGCAAGATGGTGTTCTTAACAATGAGACATCTCTCCAGTCCTTCAAG  248

seq1  GTATGAGATTCTTATAGAGAGTTTATACACTTAAGAAAACATTAATTTTT  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGATTCTTATAGAGAGTTTATACACTTAAGAAAACATTAATTTTT  298

seq1  AAGCATCTTTTTGGGTCTGGTCATGAAACTTATTTTACATTCAAACTGAC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTTTTTGGGTCTGGTCATGAAACTTATTTTACATTCAAACTGAC  348

seq1  TGTCTCTCTGGGACTTGGGTATTCAATTTTTGGGTTCTTAGAAACATGCA  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTGGGACTTGGGTATTCAATTTTTGGGTTCTTAGAAACATGCA  398

seq1  CAACATTGATGTAGGTCTCTTAACTGGCAAGGCAACCTGAGTGTTCCTAT  439
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CAACATTGATGTAGGTCTCTTAACTGGCAAGGCAACGTGAGTGTTCCTAT  448

seq1  CCCATCACCCTCATGTTTTAGGTGCTTAATAAAGAATTGTTGAGAGAAGA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCACCCTCATGTTTTAGGTGCTTAATAAAGAATTGTTGAGAGAAGA  498

seq1  AGCTTTCATTAGAATCCTACCTCTGGGAATTATGAATCAAGCCCTCAAAT  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTCATTAGAATCCTACCTCTGGGAATTATGAATCAAGCCCTCAAAT  548

seq1  ATTTTCATAATATTTCTACATGAGAAAGAATGAAAGAAGAAATAAAAAAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATAATATTTCTACATGAGAAAGAATGAAAGAAGAAATAAAAAAA  598

seq1  ACCCATTTCTACACAAGTCATGAATCTGCCTAATTGTTTGGGCTTCCATT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTTCTACACAAGTCATGAATCTGCCTAATTGTTTGGGCTTCCATT  648

seq1  TGTTTTGAGCAGATAAAACATTCAAACCAATTCTAGCAATAAAAAGTTTA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGAGCAGATAAAACATTCAAACCAATTCTAGCAATAAAAAGTTTA  698

seq1  AGGCTTCATGAGCAAAAATATCATCTCTTACTGAGTCTCTCTTTTTGATT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCATGAGCAAAAATATCATCTCTTACTGAGTCTCTCTTTTTGATT  748

seq1  CTCCTTGTTTCCCTAAAGTAAAGGCAATACATTCTTTTATGTCCTTCCAT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGTTTCCCTAAAGTAAAGGCAATACATTCTTTTATGTCCTTCCAT  798

seq1  AGAGATTTTAATGCATCTATAAACAGATAGAATAGACTTTCCCCTCTTCT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTTAATGCATCTATAAACAGATAGAATAGACTTTCCCCTCTTCT  848

seq1  CATTCAATTGGTAGCATTTTATGCATTTCTGTCACCATATTATAGTTAAA  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATTGGTAGCATTTTATGCATTTCTGTCACCATATTATAGTTAAA  898

seq1  GAACTCAACAGTACATCTTGTAGATCTTTCTGGTTTAGTACATAAGAGAA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAACAGTACATCTTGTAGATCTTTCTGGTTTAGTACATAAGAGAA  948

seq1  ATAGCTGCATGCCTATTACTACCCTTCATTCCTTCATCTTCAAGGGAATT  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGCATGCCTATTACTACCCTTCATTCCTTCATCTTCAAGGGAATT  998

seq1  GTACTTTGCTGGATTGTAAAATAACTAGGTAAGGTCCAGATGTGCTTAGA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTGCTGGATTGTAAAATAACTAGGTAAGGTCCAGATGTGCTTAGA  1048

seq1  CTGTCTCTGGTTTTTTATAAATGACAGTTGAGAGTATAAATGAAAAAGGG  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGGTTTTTTATAAATGACAGTTGAGAGTATAAATGAAAAAGGG  1098

seq1  CCATGGAGGTGGGGCCATTTTGTTAAAGTTACGCTGTGTTTGACCCTTCT  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAGGTGGGGCCATTTTGTTAAAGTTACGCTGTGTTTGACCCTTCT  1148

seq1  CTTGGCAAATTCTCTCAATACATGGAATTC  1169
      ||||||||||||||||||||||||||||||
seq2  CTTGGCAAATTCTCTCAATACATGGAATTC  1178