BAC Information

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BAC

Clone NameB6Ng01-205D16
Chromosome6 (Build37)
Map Location 18,559,417 - 18,560,614
singlet/doubletsinglet
Overlap genenone
Upstream geneCapza2, St7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2
Downstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205D16.bB6Ng01-205D16.g
ACCGA024966GA024967
length1,1891,086
definitionB6Ng01-205D16.b B6Ng01-205D16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctcaggaaaatcttccaggtcactttcattagatgtgctta
ttctggggttaatactttgtggagaaaatgtgttgtcttgaattttcatg
ttatttctgtttctatgttgacatttatgcatctggaattggattacttg
ctgaatacttcctttaattgtttttgttgtggttaatatcacttatattc
ttccagtcaaggcatttatagtgttcaagacaagactatgtcatcgtagc
attgagacacctagtttcctccgtggggcaaatgtaggaaattcagtaga
ggcataggcagagccaagcaagaaaaatcaggttttctactttcatgggg
gaggttttgttggtcaaaatcctgaagtgaaattcttaggggctacaagc
agtcctgatgcagatggctagtggaatctggtatatctagttgggagccc
tctcctggagaatttcttatactctcaacgtcatcattccctagttgcct
gtagttctttgtctcaggttggggttctgtgaaacttcccccttccatgt
gtgcatgtctgctgctactgtccttgttcaggtgtttagaccaccatgtt
gatgagactttatgagtatgtagcttccctgatatttctacaagtaacac
tatatgtactgagtagattgtaattatatatttagaaaaataatatatga
aatacaaattaaagaaaaaaaagaccatgaatttgagaggggatgtgtgg
cccattgtgaacaaatgggaaaaataatgtaatataaagactttaatata
aagtctttaattaaaatgacattgtaagcaaatacagggccactagtaag
gctgtaacacaaaaggtgacataatcttctggtgactttagcacaaacat
tttatggtttctctattctgacagtgggactgcaatacttagataaaagt
cttaagtttaatatattttccacatggtttatgaatgaaatttgcataca
tgtcaaaatcacatagctatttatagaagtatctatcatctcttttttct
atgcatggggcttactctacaagactttaggtgctaggaataattaaatg
caatataactgcaagccaggttaatttaatgagacggcatgttcttaatt
gcacagcaatgtgcatgcctggggcaggtgttagagaga

gaattcctgatctctccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttttctgcacctaactagatgatcatgtggtttttgtcttt
gaatttgtttatataatggattacgttggtggattttcatatattaaacc
atccctgaatccctggaataaaacctacttggtcagaatagatgattgct
ttaatgtgttcttggatttggttagtgagaattttattgaggatttttgc
atctatattcataagggaaattggtctgaagttttctatctttgttggat
ctttctgtggtttaggtatcagagtaattgtggcttcataaaatgagttg
ggtagagttccttctacttgtattttgtgaaatagtttgtgcagatttgg
aattagatcttctttaaaggtctggtagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaatgactgcttctatttct
ttaggggatatgggactgtttagacagttaacttgatcctgatttaactt
tggtacctggtatctgtctagaaacttgtccatttcatccaggttttgca
gttttgttgagtgtagccttttgtagaaggatctgatggtgttttggatt
tctgcaggatctgttgttatgtctcacttttcatttctgatttttgttaa
ataggatgttgtccctctgccctctagtgagtctggctaacggtttatct
atcttgttgatcttctcaaagaaccaactcctcgtttggtttaattcttg
aacagttcttgtttccatttggttgatttcacccctgagtttattttcct
gccgtctactcgtccttgggtgaattttctttctttttttctagagcttt
tagatgtgttgtcaagctactagtgtgtgctccctctggtttctttttga
aggcacttcagagctatgagttcccctcttataaaggcttcttggtgtcc
cataggtttgtgtttagttggtggcttcacttcattaaactctaataggc
ctttaatttcctttctttattccttctggaccaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18559417_18560614
seq2: B6Ng01-205D16.b_43_1231

seq1  GAATTCTTTCTCAGGAAAATCTTCCAGGTCACTTTCATTAGATGTGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCAGGAAAATCTTCCAGGTCACTTTCATTAGATGTGCTTA  50

seq1  TTCTGGGGTTAATACTTTGTGGAGAAAATGTGTTGTCTTGAATTTTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGGTTAATACTTTGTGGAGAAAATGTGTTGTCTTGAATTTTCATG  100

seq1  TTATTTCTGTTTCTATGTTGACATTTATGCATCTGGAATTGGATTACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTGTTTCTATGTTGACATTTATGCATCTGGAATTGGATTACTTG  150

seq1  CTGAATACTTCCTTTAATTGTTTTTGTTGTGGTTAATATCACTTATATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATACTTCCTTTAATTGTTTTTGTTGTGGTTAATATCACTTATATTC  200

seq1  TTCCAGTCAAGGCATTTATAGTGTTCAAGACAAGACTATGTCATCGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTCAAGGCATTTATAGTGTTCAAGACAAGACTATGTCATCGTAGC  250

seq1  ATTGAGACACCTAGTTTCCTCCGTGGGGCAAATGTAGGAAATTCAGTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGACACCTAGTTTCCTCCGTGGGGCAAATGTAGGAAATTCAGTAGA  300

seq1  GGCATAGGCAGAGCCAAGCAAGAAAAATCAGGTTTTCTACTTTCATGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGGCAGAGCCAAGCAAGAAAAATCAGGTTTTCTACTTTCATGGGG  350

seq1  GAGGTTTTGTTGGTCAAAATCCTGAAGTGAAATTCTTAGGGGCTACAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTTGTTGGTCAAAATCCTGAAGTGAAATTCTTAGGGGCTACAAGC  400

seq1  AGTCCTGATGCAGATGGCTAGTGGAATCTGGTATATCTAGTTGGGAGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTGATGCAGATGGCTAGTGGAATCTGGTATATCTAGTTGGGAGCCC  450

seq1  TCTCCTGGAGAATTTCTTATACTCTCAACGTCATCATTCCCTAGTTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGAGAATTTCTTATACTCTCAACGTCATCATTCCCTAGTTGCCT  500

seq1  GTAGTTCTTTGTCTCAGGTTGGGGTTCTGTGAAACTTCCCCCTTCCATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCTTTGTCTCAGGTTGGGGTTCTGTGAAACTTCCCCCTTCCATGT  550

seq1  GTGCATGTCTGCTGCTACTGTCCTTGTTCAGGTGTTTAGACCACCATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTCTGCTGCTACTGTCCTTGTTCAGGTGTTTAGACCACCATGTT  600

seq1  GATGAGACTTTATGAGTATGTAGCTTCCCTGATATTTCTACAAGTAACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGACTTTATGAGTATGTAGCTTCCCTGATATTTCTACAAGTAACAC  650

seq1  TATATGTACTGAGTAGATTGTAATTATATATTTAGAAAAATAATATATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTACTGAGTAGATTGTAATTATATATTTAGAAAAATAATATATGA  700

seq1  AATACAAATTAAAGAAAAAAAAGACCATGAATTTGAGAGGGGATGTGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAAATTAAAGAAAAAAAAGACCATGAATTTGAGAGGGGATGTGTGG  750

seq1  CCCATTGTGAACAAATGGGAAAAATAATGTAATATAAAGACTTTAATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGTGAACAAATGGGAAAAATAATGTAATATAAAGACTTTAATATA  800

seq1  AAGTCTTTAATTAAAATGACATTGTAAGCAAATACAGGGCCACTAGTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTTAATTAAAATGACATTGTAAGCAAATACAGGGCCACTAGTAAG  850

seq1  GCTGTAACACAAAAGGTGACATAATCTTCTGGTGACTTTAGCACAAACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAACACAAAAGGTGACATAATCTTCTGGTGACTTTAGCACAAACAT  900

seq1  TTTATGGTTTCTCTATTCTGACAGTGGGACTGCAATACTTAGATAAAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTTTCTCTATTCTGACAGTGGGACTGCAATACTTAGATAAAAGT  950

seq1  CTTAAGGTTTAATATATTTTCCACATGGTTTATGAATGAAATTTGCATAC  1000
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAA-GTTTAATATATTTTCCACATGGTTTATGAATGAAATTTGCATAC  999

seq1  ATGTCAAAAATCACATAGCTATTTATAGAAGTATCTATCATCTC-TTTTT  1049
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGTC-AAAATCACATAGCTATTTATAGAAGTATCTATCATCTCTTTTTT  1048

seq1  CTATGCATGTGGCTTACTCTACAAAGACTTTAGGTGCTAGGAATAAATAA  1099
      ||||||||| |||||||||||| ||||||||||||||||||||||| |||
seq2  CTATGCATGGGGCTTACTCTAC-AAGACTTTAGGTGCTAGGAATAATTAA  1097

seq1  ATGCAATATAACTGCAAAGCAAGGTTATTTAAAATGAGAAAGGGGATG-T  1148
      ||||||||||||||| |||| |||||| ||  ||||||  | || ||| |
seq2  ATGCAATATAACTGC-AAGCCAGGTTAATT-TAATGAG--ACGGCATGTT  1143

seq1  CTAAATTTGCACAGGAAATGGAAATGGGCTGGGGGAAAGTGTTAGAGAGA  1198
      || || ||||||| | ||||   ||  ||  |||| | ||||||||||||
seq2  CTTAA-TTGCACA-GCAATGTGCAT--GCCTGGGGCAGGTGTTAGAGAGA  1189


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