BAC Information

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BAC

Clone NameB6Ng01-205M08
Chromosome6 (Build37)
Map Location 132,287,111 - 132,288,151
singlet/doubletsinglet
Overlap genenone
Upstream geneCsda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5
Downstream geneEG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205M08.bB6Ng01-205M08.g
ACCGA025361GA025362
length1,2151,229
definitionB6Ng01-205M08.b B6Ng01-205M08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattacatgaatccctggcttctgttcattggataggagtaagt
atctgtgtctgtctcagtcagcttcttgttgggtctttgagaggatagat
atgctacgctcctgtctgtaagtacaccatatcatcttaggcattttgat
tggtgaaaggtggaatcacagggtccttttgatttgtatttccttgatca
ctaagaactttgaacatttattaaagtaagtgcttcttggttatttgaca
ttcctctgttgtgaattatctatttagttccctcaacataaaaccacact
cactgaatctaatagaagagaaagtaggaaataaccttgaactcatcgtc
aggggaagttgttgtggtggagatacattaaaaaaactacaatggctcag
tctctaagatcaagaactgataaatcagaccttatgaaactgaaaacctt
ctgtaaggcaaaggataaatctgcaaactacagattggacaaaaaaaggc
tttactagtcccatatcacatagaatgttaatatcttaaatatgtaaaga
actcaagaagctaacctctccccctgaccccctcccccccaaaaaagtgg
tatacatgtcggtagagaatttgcaacaggaatctggaatatctgagaag
aacttgaagaaatctgacacttaacatggattcttgtcaaatatggactt
ctgttggatcctatgctctgcacacaagggccatttctgcacttctctaa
tatatacagattactaatataaagaaagtgaacagtgggtctctctataa
ataatgtaacaattatacaaagacgagactgatgcttttaacacaaaatt
tcatgcatgtattctgaatagggaacattttttaacttaaattttctact
ctatacaattgacaatgacaatgatttttttttctggactcatttgtttt
tatggagtagatatcataggtacttggttctttcacgtcattatattaat
tatcttgattatctctcgtttttgcatacatattttggaagaaaattcaa
tatgctagacattaaggaggggaaagaaatgtgctggaggaccagaaatg
ggaaaaatatttgagggaaactgtaattcctttttggaggtctaattact
ttaagggtgctggagtctggaccaggtctcttattccttgatatcaccag
cgttggtgccctttt
gaattctttacagaatgaaataaagtttttactggaataagatggcccat
tgtctgtcttaataagtttaggcaatcccatggcattaaatgcttgtagg
caatgatcaattacgttttttgaagcttctcctgtatgcagagaagcaaa
aagaaatcctgaacaagtatcaatgcaaacatgtatatattttagttttc
caaattctgcataatgggttatatccatttgccaaatatgattaggcata
aggcctctaggattaactcctagatgcggcactggagataaagtaataca
tttaggacattgttttacgatcattctcgcttgctcctttgtgatcttat
gtcggagccttagggtatggctagaaagatgaaacctttcctgatcacgt
tgggccaaagcaacccgatctgaaactaaggcttctcctattagagctct
gtcaatgcgatcattaccctctgccagaggtccaggaagaccagagtgag
accgtatgtggccaatataaaacggatttttccgggcgagaatgatgttt
tgtaattctgaaaataaagatcctgacggcgtattgaagttaaacgtacc
acaggtttccaataagggcactgactgagcaacatataaactgtcagtaa
aaatattaaaagcctcatgcacagactgaaaaaccttcagtactgctgtt
aattcggcgagctgagccgagagaccaggagtctctacgataacctgttg
attactaataagatatccagctcgccctttagaggagccatcagtaaaaa
tcaatagagcattatttaaaggctgtaaggaagtcatcttaggaaatatc
atatcatgcacattttaagaattttatcaacctatcttgggggtagtggg
ctatctagagttccttcaaacccctaaattgcgcaagcaaccaatctgta
ctatgctgtttcagccaagtgtccctgactcacgctgtaaggctggacaa
tgattatctggcctcctttcaaaataagtcaatgcattgcctttttctca
gtgatatcaatctggagccactgcttcgtgaatatgggcaagaataatac
gtttgggaagaaattctcgaatgatcccacattataggaatttttgcatg
catctcggaagtcatgatcgataaataacaggtgccacgccagggataac
tcatgttaaggtgacaaagttgtactctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132287111_132288151
seq2: B6Ng01-205M08.b_210_1261

seq1  AATCACAGGGTCCTTTTGATTTGTATTTCCTTGATCACTAAGAACTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGGGTCCTTTTGATTTGTATTTCCTTGATCACTAAGAACTTTGA  50

seq1  ACATTTATTAAAGTAAGTGCTTCTTGGTTATTTGACATTCCTCTGTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTATTAAAGTAAGTGCTTCTTGGTTATTTGACATTCCTCTGTTGTG  100

seq1  AATTATCTATTTAGTTCCCTCAACATAAAACCACACTCACTGAATCTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTATTTAGTTCCCTCAACATAAAACCACACTCACTGAATCTAAT  150

seq1  AGAAGAGAAAGTAGGAAATAACCTTGAACTCATCGTCAGGGGAAGTTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAAAGTAGGAAATAACCTTGAACTCATCGTCAGGGGAAGTTGTT  200

seq1  GTGGTGGAGATACATTAAAAAAACTACAATGGCTCAGTCTCTAAGATCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGAGATACATTAAAAAAACTACAATGGCTCAGTCTCTAAGATCAA  250

seq1  GAACTGATAAATCAGACCTTATGAAACTGAAAACCTTCTGTAAGGCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGATAAATCAGACCTTATGAAACTGAAAACCTTCTGTAAGGCAAAG  300

seq1  GATAAATCTGCAAACTACAGATTGGACAAAAAAAGGCTTTACTAGTCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCTGCAAACTACAGATTGGACAAAAAAAGGCTTTACTAGTCCCA  350

seq1  TATCACATAGAATGTTAATATCTTAAATATGTAAAGAACTCAAGAAGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACATAGAATGTTAATATCTTAAATATGTAAAGAACTCAAGAAGCTA  400

seq1  ACCTCTCCCCCTGACCCCCTCCCCCCCAAAAAAGTGGTATACATGTCGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCCCCTGACCCCCTCCCCCCCAAAAAAGTGGTATACATGTCGGT  450

seq1  AGAGAATTTGCAACAGGAATCTGGAATATCTGAGAAGAACTTGAAGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTTGCAACAGGAATCTGGAATATCTGAGAAGAACTTGAAGAAAT  500

seq1  CTGACACTTAACATGGATTCTTGTCAAATATGGACTTCTGTTGGATCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACTTAACATGGATTCTTGTCAAATATGGACTTCTGTTGGATCCTA  550

seq1  TGCTCTGCACACAAGGGCCATTTCTGCACTTCTCTAATATATACAGATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGCACACAAGGGCCATTTCTGCACTTCTCTAATATATACAGATTA  600

seq1  CTAATATAAAGAAAGTGAACAGTGGGTCTCTCTATAAATAATGTAACAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATAAAGAAAGTGAACAGTGGGTCTCTCTATAAATAATGTAACAAT  650

seq1  TATACAAAGACGAGACTGATGCTTTTAACACAAAATTTCATGCATGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAAGACGAGACTGATGCTTTTAACACAAAATTTCATGCATGTATT  700

seq1  CTGAATAGGGAACATTTTTTAACTTAAATTTTCTACTCTATACAATTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAGGGAACATTTTTTAACTTAAATTTTCTACTCTATACAATTGAC  750

seq1  AATGACAATGA--TTTTTTTCTGGACTCATTTGTTTTTAT-GAGTAGATA  797
      |||||||||||  ||||||||||||||||||||||||||| |||||||||
seq2  AATGACAATGATTTTTTTTTCTGGACTCATTTGTTTTTATGGAGTAGATA  800

seq1  TCATAGGTACTTGG-TCTTTCACGTCATTATATTAATTATCTTGATTATC  846
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCATAGGTACTTGGTTCTTTCACGTCATTATATTAATTATCTTGATTATC  850

seq1  TCTCGTTTTTGCATACATATTTTGGAAGAGAAT--CATATGCTAGACATT  894
      ||||||||||||||||||||||||||||| |||   ||||||||||||||
seq2  TCTCGTTTTTGCATACATATTTTGGAAGAAAATTCAATATGCTAGACATT  900

seq1  AA-GAGGGGAAAGAAATGTGCTGGAGGACCAGAAATGG--AAAATATTTG  941
      || |||||||||||||||||||||||||||||||||||  ||||||||||
seq2  AAGGAGGGGAAAGAAATGTGCTGGAGGACCAGAAATGGGAAAAATATTTG  950

seq1  A-GGAAACTGTAA-TCCTTTTT-GAAGTCTAATTACCTTTAGGTTGCT-G  987
      | ||||||||||| |||||||| || |||||||||| || ||| |||| |
seq2  AGGGAAACTGTAATTCCTTTTTGGAGGTCTAATTACTTTAAGGGTGCTGG  1000

seq1  AGTCTGGAACACAGTCTCTTATTCTTTTAAATATCAACA-AGTTGGTGCC  1036
      |||||||| ||  ||||||||||| ||   |||||| ||  |||||||||
seq2  AGTCTGGACCA-GGTCTCTTATTCCTT--GATATCACCAGCGTTGGTGCC  1047

seq1  CTTTT  1041
      |||||
seq2  CTTTT  1052