BAC Information

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BAC

Clone NameB6Ng01-205P06
Chromosome6 (Build37)
Map Location 115,959,789 - 115,960,169
singlet/doubletsinglet
Overlap genenone
Upstream gene1500001M20Rik, LOC100043420, Syn2, Timp4, Pparg, Tsen2, 2510049J12Rik, Mkrn2, Raf1, LOC100043759, D830050J10Rik, Tmem40, EG620848, Cand2, Rpl32, BC060267, Mbd4, Ift122, Rho, H1foo, Plxnd1
Downstream geneTmcc1, LOC100043425, EG666634, EG666648, D6Wsu116e, Anubl1, March8, Alox5, LOC100043432, Olfr211, Olfr212, Olfr213, EG434080, Olfr214, Olfr215, Zfp422, Rassf4, 8430408G22Rik, C230095G01Rik, LOC100043439
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205P06.bB6Ng01-205P06.g
ACCGA025496GA025497
length1,209375
definitionB6Ng01-205P06.b B6Ng01-205P06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaaatgatgacacagcaaatccaaacttatgggacacaat
gaaagcagtgctaagaggaaaattcatagcagtcagtgcccttgtaaaga
aattggagagctcctacaccagcagcttaacagcacacctgagaacccta
gaacagaaagaagcaaaggcacctgagaagactgcagaaaatagtcaaat
gaaatcagccaaatagaaacaaagaaaactatacaaagaatcaacaaaag
ctggttctttgagaaaatcaacaagattgataaattcctagccaaactaa
ctaaagggtacagagatagtatccaaattaacaaaatcagaaatgaaaag
ggagacataacaacagaaactgaggaaatttaaaaaatcatcagatccta
ctacaaaagcctgtacccaacaaaactggaaaatctagatgaaatggata
attttctagacagataccacgtaccaaagttaaatcaaactatctaaaca
gacccatatatcctaaggaaatagaagaagtcattaaagacctcccaacc
aaaagcccagggccagatggctttagtggagaattttaccagactttcaa
agaagaactagccaggcgtggtggcgcacgcctttaattccagcactcag
gaggcagaggcaggtgaatttctgagtttgcatccagcctggtctacaga
gtgagttccaggacagccaggactatacagagaaaccctgtctcaaaaaa
gaaaaagaaagaaaaaaagaagaataacaacactcctcaaagtattctat
aaaatagagacagaaggaacactacctaattcattctatgaagccacaat
tactctgatacctaaaccacacaaagacccaacaaagaaggagaatttca
gactaattttgcttataaatatcgatgcaaaaatactcaataaaatttta
ccaaaccgaatccaagaacacatcaaaaccatcattcaccatgatcagaa
gcttcatctcaaggatgcaagttggttcagtatacgaaaattatgtattc
cattattataaacaatcaaaggaaaaaatcacatgaatcatctcattaga
tgctgaaagcatttgacaaaacataacaccccttcatgttaagtattgag
agatcagatccaggccacccttacattattaaggccaatttatccagcgc
agaatctac
caggactgtcccaacccactgtccctgctgagctaggccctagggtggac
attttttttttttttaagatttatttattgattatatgtaagtacactgt
agctgtcttcagactctccagaagagggagtcagatcttgttacggatgg
ttgtgagccaccatgtggttgctgggatttgaactcctgaccttcggaag
agcagtcgggtgctcttacccactgagccatctcaccagccccctagggt
ggacttaagaggtgcagaccaaccagaccattgagccaactggtaaagac
agccttgaggtctgctgactggggctagagtcctgggcctaaccctagtt
tccctgtgtgagggagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_115959789_115960169
seq2: B6Ng01-205P06.g_64_444

seq1  GAATTCCAGGACTGTCCCAACCCACTGTCCCTGCTGAGCTAGGCCCTAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACTGTCCCAACCCACTGTCCCTGCTGAGCTAGGCCCTAGG  50

seq1  GTGGACATTTTTTTTTTTTTTAAGATTTATTTATTGATTATATGTAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACATTTTTTTTTTTTTTAAGATTTATTTATTGATTATATGTAAGTA  100

seq1  CACTGTAGCTGTCTTCAGACTCTCCAGAAGAGGGAGTCAGATCTTGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAGCTGTCTTCAGACTCTCCAGAAGAGGGAGTCAGATCTTGTTAC  150

seq1  GGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCTGACCTT  200

seq1  CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCCC  250

seq1  TAGGGTGGACTTAAGAGGTGCAGACCAACCAGACCATTGAGCCAACTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGGACTTAAGAGGTGCAGACCAACCAGACCATTGAGCCAACTGGT  300

seq1  AAAGACAGCCTTGAGGTCTGCTGACTGGGGCTAGAGTCCTGGGCCTAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGCCTTGAGGTCTGCTGACTGGGGCTAGAGTCCTGGGCCTAACC  350

seq1  CTAGTTTCCCTGTGTGAGGGAGGGAGGGAGG  381
      |||||||||||||||||||||||||||||||
seq2  CTAGTTTCCCTGTGTGAGGGAGGGAGGGAGG  381