BAC Information

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BAC

Clone NameB6Ng01-208D23
Chromosome6 (Build37)
Map Location 132,013,273 - 132,179,084
singlet/doubletdoublet
Overlap geneEG114600, Prb1, LOC631126
Upstream geneLOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802
Downstream geneLOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208D23.bB6Ng01-208D23.g
ACCGA027178GA027179
length1,1731,159
definitionB6Ng01-208D23.b B6Ng01-208D23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,013,273 - 132,014,453)(132,177,929 - 132,179,084)
sequence
gaattctcagttcctgcagaaccatgccaatctggatgtctctatgctac
ccaccatggccataactgactgagctgcaaaacctgtaagccagccccaa
ttaaatggtatcctttataagagttgccatgggcatggttgctctttata
ggattggaaacccttattaagaaagaggtcctttggaggatactgtttct
ttcctcagtgtgtaagtaggctgtgctgctagatgattctggtgaagttg
ttatcctttgcatgacagacaaccactaagaatcacacaacactagtagg
agctaggttttaagtttaagcctcctactaacttatcactcacagtttgg
attaaagatttctgttatatttctaccattaattctctaaaggacactct
agctactagaatcactctaaaggtgacaggatatctagtcaagtatccac
tggcaaatcagtcatcttgcttatgactgttagttttacttggaaacact
ggaaaggtaaacctggagctgctatcatcatatatcatttgcatatggtt
acaggattgctgtccttcccctctctttccccactaagtctgtattcttt
tttatgccaggccatatcacacaggactggaaatacctaatagttgaggt
gaactttgtgttttatgtatggccaaaggttcctccaagttggaacagga
tatttggaggtagtctaaatgaactctgcagtatctgtgttacagagacc
aaactagattatttctttggctcttaagacactacatgtagtctgtctct
agaagctatgtccttggatgaactggcatgtgacaagtacgttggattga
attttgatgttgctatgcctccttgtgcacaggtgactttttattacaac
agaaacacttttcctaagattgtacagtgctaaaacttgctgacaataaa
ctctttatgtctaggtgtttgaactgctatgggttcatgagttctgattg
ctctcaaccattgtctagcagtgtggtctttgcagaacctcccaggcatc
ttcttatggggaggactcatttttattgacaccatctaaaccactttaat
gccccattcaatcaatgatcaattggctccatctagtctcatggtctaac
cgatgggcattttttgagttgtg
gaattcttccccaggtaaactttcctaaaaattgctttttctattctgat
aaactctcttagctagaaaactctttcctgaaatgaaggaagtagaaaag
cctgatgaaatggattaaattgaactggcagactttgatccaagtcaaga
aagacagcatcattataatggagaagagtatgaggatgatgaacatcatg
tcagagatcatattctgtatcagacctcttatggaccagtcactctttga
cattgagtatgcaacaggctattggggaaggactctaatcataacatgct
tactacttgactattgtttttattttaatactcaactataattgtgtttt
gtaagttaaatgaagaataaacataaatataaaaacttgaaagaagaata
atttttccctagagttggtggtggctgcccataaccagcactgccaggat
caggctaatatccccttttccctttctgtgtttatcccactttttctgaa
ttaaaaggttgattctagtgatgagaatgagggctgctatgctccattcc
tccagctgtcaggctacaaactgttctataacaccactcttcaagatccc
tccttcactagctcttccactatggcatcatcagaggtatcttcagctta
cccctggctggcatgattaaaggtgtttttcatggtaatttaaattatag
caccatttcaggcatagaacttcacataccccttactgttcacaaatccc
caaagtatcccttaagcatatcaatacacccctgcctcaatgtccaaacg
ttcctcaaaggtccaatttcactggaattcctgtcccttgggagcactgc
cagccttactaggtgtaaaattcgccagggactttctgatattgaaattt
aacctcattctgggtatgtgaaggtttacctcaaatgatagttcataaca
ttaatattatgttaacaggtatctaaaaaaaaataagcataggacgaagt
caaatttgtatgcattttgagatcaaacagtacatgatagaaaaaagctg
attccaataatactcatggcctccactagccagatttgcctcttgccttc
tggaaatgtacatacgtgttggaatagacgttagttctgcaacttatatc
ctcccaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132013273_132014453
seq2: B6Ng01-208D23.b_44_1216

seq1  GAATTCTCAGTTCCTGCAGAACCATGCCAATCTGGATGTCTCTATGCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTCCTGCAGAACCATGCCAATCTGGATGTCTCTATGCTAC  50

seq1  CCACCATGGCCATAACTGACTGAGCTGCAAAACCTGTAAGCCAGCCCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATGGCCATAACTGACTGAGCTGCAAAACCTGTAAGCCAGCCCCAA  100

seq1  TTAAATGGTATCCTTTATAAGAGTTGCCATGGGCATGGTTGCTCTTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGGTATCCTTTATAAGAGTTGCCATGGGCATGGTTGCTCTTTATA  150

seq1  GGATTGGAAACCCTTATTAAGAAAGAGGTCCTTTGGAGGATACTGTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGAAACCCTTATTAAGAAAGAGGTCCTTTGGAGGATACTGTTTCT  200

seq1  TTCCTCAGTGTGTAAGTAGGCTGTGCTGCTAGATGATTCTGGTGAAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAGTGTGTAAGTAGGCTGTGCTGCTAGATGATTCTGGTGAAGTTG  250

seq1  TTATCCTTTGCATGACAGACAACCACTAAGAATCACACAACACTAGTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTTTGCATGACAGACAACCACTAAGAATCACACAACACTAGTAGG  300

seq1  AGCTAGGTTTTAAGTTTAAGCCTCCTACTAACTTATCACTCACAGTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGTTTTAAGTTTAAGCCTCCTACTAACTTATCACTCACAGTTTGG  350

seq1  ATTAAAGATTTCTGTTATATTTCTACCATTAATTCTCTAAAGGACACTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGATTTCTGTTATATTTCTACCATTAATTCTCTAAAGGACACTCT  400

seq1  AGCTACTAGAATCACTCTAAAGGTGACAGGATATCTAGTCAAGTATCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTAGAATCACTCTAAAGGTGACAGGATATCTAGTCAAGTATCCAC  450

seq1  TGGCAAATCAGTCATCTTGCTTATGACTGTTAGTTTTACTTGGAAACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAATCAGTCATCTTGCTTATGACTGTTAGTTTTACTTGGAAACACT  500

seq1  GGAAAGGTAAACCTGGAGCTGCTATCATCATATATCATTTGCATATGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGTAAACCTGGAGCTGCTATCATCATATATCATTTGCATATGGTT  550

seq1  ACAGGATTGCTGTCCTTCCCCTCTCTTTCCCCACTAAGTCTGTATTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATTGCTGTCCTTCCCCTCTCTTTCCCCACTAAGTCTGTATTCTTT  600

seq1  TTTATGCCAGGCCATATCACACAGGACTGGAAATACCTAATAGTTGAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCCAGGCCATATCACACAGGACTGGAAATACCTAATAGTTGAGGT  650

seq1  GAACTTTGTGTTTTATGTATGGCCAAAGGTTCCTCCAAGTTGGAACAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTTGTGTTTTATGTATGGCCAAAGGTTCCTCCAAGTTGGAACAGGA  700

seq1  TATTTGGAGGTAGTCTAAATGAACTCTGCAGTATCTGTGTTACAGAGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGAGGTAGTCTAAATGAACTCTGCAGTATCTGTGTTACAGAGACC  750

seq1  AAACTAGATTATTTCTTTGGCTCTTAAGACACTACATGTAGTCTGTCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGATTATTTCTTTGGCTCTTAAGACACTACATGTAGTCTGTCTCT  800

seq1  AGAAGCTATGTCCTTGGATGAACTGGCATGTGACAAGTACGTTGGATTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTATGTCCTTGGATGAACTGGCATGTGACAAGTACGTTGGATTGA  850

seq1  ATTTTGATGTTGCTATGCCTCCTTGTGCACAGGTGACTTTTTATTACAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATGTTGCTATGCCTCCTTGTGCACAGGTGACTTTTTATTACAAC  900

seq1  AGAAACACTTTTCCTAAGATTGTACAGTGCTAAAACTTGCTGACAATAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACTTTTCCTAAGATTGTACAGTGCTAAAACTTGCTGACAATAAA  950

seq1  CTCTTTAATGTCTAGGTGTTTGAACTGCTATGGGTTCATGAAGTTCTGAT  1000
      |||||| ||||||||||||||||||||||||||||||||| |||||||||
seq2  CTCTTT-ATGTCTAGGTGTTTGAACTGCTATGGGTTCATG-AGTTCTGAT  998

seq1  TGCCTCTCAACCATTGTCTAGCAGTTGTGGTCTTTGCAGAAACTCCCAGG  1050
      || ||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  TG-CTCTCAACCATTGTCTAGCAG-TGTGGTCTTTGCAGAACCTCCCAGG  1046

seq1  CATCTTCTTATGGGGAAGGACTCATTTT--ATGACACCATCCTAAACCAC  1098
      ||||||||||||||| ||||||||||||   ||||||||| |||||||||
seq2  CATCTTCTTATGGGG-AGGACTCATTTTTATTGACACCAT-CTAAACCAC  1094

seq1  TTTTAATGCCCCCATCCATCAAATGATCATTTGGGCTCCATCTAGGCCTC  1148
       |||||||||||  || ||| |||||||| || ||||||||||| | |||
seq2  -TTTAATGCCCCATTCAATC-AATGATCAATT-GGCTCCATCTA-GTCTC  1140

seq1  ATGGGCCTACCCAT-GGCATTTTTTGGTGTTGTG  1181
      |||| |  ||| || |||||||||| | ||||||
seq2  ATGGTCTAACCGATGGGCATTTTTT-GAGTTGTG  1173

seq1: chr6_132177929_132179084
seq2: B6Ng01-208D23.g_64_1222 (reverse)

seq1  ACTTGGGAG--TATAAG-TGCAGAACTAACACTCAAATCC-ACACGTATG  46
      |||||||||  |||||| ||||||||||||  || | ||| |||||||||
seq2  ACTTGGGAGGATATAAGTTGCAGAACTAAC-GTCTATTCCAACACGTATG  49

seq1  TACATCT-CAGAA-GCAAGA-GCAAATTCTGCTAGGTGGAGG-CATGAGT  92
      ||||| | ||||| |||||| ||||||   |||| ||||||| |||||| 
seq2  TACATTTCCAGAAGGCAAGAGGCAAATCTGGCTA-GTGGAGGCCATGAG-  97

seq1  TATTATTGGGAATCAGC-TTTTTCTATCATGTACTTGTTTGATCTCAAAA  141
      ||||||| ||||||||| |||||||||||||||| |||||||||||||||
seq2  TATTATT-GGAATCAGCTTTTTTCTATCATGTAC-TGTTTGATCTCAAAA  145

seq1  TGCCATACAAATTTTGACTTCGTCCTATGCTTA-TTTTTTTTAGATACCT  190
      || |||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  TG-CATACAAA-TTTGACTTCGTCCTATGCTTATTTTTTTTTAGATACCT  193

seq1  GTTAACATAATATTAATGTTATGAACTATCATTTGAGGTAAACCTTCACA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACATAATATTAATGTTATGAACTATCATTTGAGGTAAACCTTCACA  243

seq1  TACCCAGAATGAGGTTAAATTTCAATATCAGAAAGTCCCTGGCGAATTTT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGAATGAGGTTAAATTTCAATATCAGAAAGTCCCTGGCGAATTTT  293

seq1  ACACCTAGTAAGGCTGGCAGTGCTCCCAAGGGACAGGAATTCCAGTGAAA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTAGTAAGGCTGGCAGTGCTCCCAAGGGACAGGAATTCCAGTGAAA  343

seq1  TTGGACCTTTGAGGAACGTTTGGACATTGAGGCAGGGGTGTATTGATATG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACCTTTGAGGAACGTTTGGACATTGAGGCAGGGGTGTATTGATATG  393

seq1  CTTAAGGGATACTTTGGGGATTTGTGAACAGTAAGGGGTATGTGAAGTTC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGGATACTTTGGGGATTTGTGAACAGTAAGGGGTATGTGAAGTTC  443

seq1  TATGCCTGAAATGGTGCTATAATTTAAATTACCATGAAAAACACCTTTAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTGAAATGGTGCTATAATTTAAATTACCATGAAAAACACCTTTAA  493

seq1  TCATGCCAGCCAGGGGTAAGCTGAAGATACCTCTGATGATGCCATAGTGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCAGCCAGGGGTAAGCTGAAGATACCTCTGATGATGCCATAGTGG  543

seq1  AAGAGCTAGTGAAGGAGGGATCTTGAAGAGTGGTGTTATAGAACAGTTTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTAGTGAAGGAGGGATCTTGAAGAGTGGTGTTATAGAACAGTTTG  593

seq1  TAGCCTGACAGCTGGAGGAATGGAGCATAGCAGCCCTCATTCTCATCACT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGACAGCTGGAGGAATGGAGCATAGCAGCCCTCATTCTCATCACT  643

seq1  AGAATCAACCTTTTAATTCAGAAAAAGTGGGATAAACACAGAAAGGGAAA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAACCTTTTAATTCAGAAAAAGTGGGATAAACACAGAAAGGGAAA  693

seq1  AGGGGATATTAGCCTGATCCTGGCAGTGCTGGTTATGGGCAGCCACCACC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATATTAGCCTGATCCTGGCAGTGCTGGTTATGGGCAGCCACCACC  743

seq1  AACTCTAGGGAAAAATTATTCTTCTTTCAAGTTTTTATATTTATGTTTAT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAGGGAAAAATTATTCTTCTTTCAAGTTTTTATATTTATGTTTAT  793

seq1  TCTTCATTTAACTTACAAAACACAATTATAGTTGAGTATTAAAATAAAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTTAACTTACAAAACACAATTATAGTTGAGTATTAAAATAAAAA  843

seq1  CAATAGTCAAGTAGTAAGCATGTTATGATTAGAGTCCTTCCCCAATAGCC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTCAAGTAGTAAGCATGTTATGATTAGAGTCCTTCCCCAATAGCC  893

seq1  TGTTGCATACTCAATGTCAAAGAGTGACTGGTCCATAAGAGGTCTGATAC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCATACTCAATGTCAAAGAGTGACTGGTCCATAAGAGGTCTGATAC  943

seq1  AGAATATGATCTCTGACATGATGTTCATCATCCTCATACTCTTCTCCATT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATGATCTCTGACATGATGTTCATCATCCTCATACTCTTCTCCATT  993

seq1  ATAATGATGCTGTCTTTCTTGACTTGGATCAAAGTCTGCCAGTTCAATTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATGCTGTCTTTCTTGACTTGGATCAAAGTCTGCCAGTTCAATTT  1043

seq1  AATCCATTTCATCAGGCTTTTCTACTTCCTTCATTTCAGGAAAGAGTTTT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATTTCATCAGGCTTTTCTACTTCCTTCATTTCAGGAAAGAGTTTT  1093

seq1  CTAGCTAAGAGAGTTTATCAGAATAGAAAAAGCAATTTTTAGGAAAGTTT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTAAGAGAGTTTATCAGAATAGAAAAAGCAATTTTTAGGAAAGTTT  1143

seq1  ACCTGGGGAAGAATTC  1156
      ||||||||||||||||
seq2  ACCTGGGGAAGAATTC  1159