BAC Information

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BAC

Clone NameB6Ng01-211P05
Chromosome6 (Build37)
Map Location 11,985,120 - 12,119,321
singlet/doubletdoublet
Overlap geneEG625347, LOC435879
Upstream geneNdufa4, Phf14, LOC100040844
Downstream geneThsd7a, LOC667735, LOC384350, Tmem106b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211P05.bB6Ng01-211P05.g
ACCGA029873GA029874
length79294
definitionB6Ng01-211P05.b B6Ng01-211P05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,985,120 - 11,985,908)(12,119,229 - 12,119,321)
sequence
gaattccttaaaggaatccttatacttaaaggtggtttttaaaggatatg
ttcctgttaggaaagattaggaaaaggatattcaattttcaaagcattca
tgtctgttaaagtttttgaaaatttgggggttaaaaacaaaatgttcact
taccatgacctttccctaatttttattaaaatgaacctaatttttctaat
caggttaatttaaggatattgttagacatgtagaagaactaaaccagccc
accacatttaatatttatggtgtgacttaattttatcatgttctcttatc
attttaataattactgtataatttttagatgtccaggaaagctaaacctt
taagtaaatttgtgtgactcatattttatgttatcattaattataattaa
ttcattatgattgcataaaatgactgcaagaagatttttaaaaatctaga
cgcttatatatggtttacatatatgtagtcaatttccatagttaattata
tagtttctgggatattaaattgtaagtaggataaatcttgttggtttttt
tttggttttttgtttttgttttttttgttgttgttgttgtttttgttttt
gttttgagtcaaggtttctctgtgtagctctggctgtcctggaactcact
ctgtagaccaggctggcctcaaactcagaaatccgcctgcctctgcctcc
caagtgcttgggattaaaaggcatgtgccacctctgcctggcaaatcatg
ttttcaaataaatttaacaccgaaatgttctgttttatttat

ttctaagaaagtagtgagtcaaaagagggaacacacttgtttcagagcag
tgacttcctttgagttgatctactataatgctgggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11985120_11985908
seq2: B6Ng01-211P05.b_47_838

seq1  GAATTCCTTAAAGGAATCCTTATACTTAAAGGTGGTTTTTAAAGGATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAAAGGAATCCTTATACTTAAAGGTGGTTTTTAAAGGATATG  50

seq1  TTCCTGTTAGGAAAGATTAGGAAAAGGATATTCAATTTTCAAAGCATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTAGGAAAGATTAGGAAAAGGATATTCAATTTTCAAAGCATTCA  100

seq1  TGTCTGTTAAAGTTTTTGAAAATTTGGGGGTTAAAAACAAAATGTTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTAAAGTTTTTGAAAATTTGGGGGTTAAAAACAAAATGTTCACT  150

seq1  TACCATGACCTTTCCCTAATTTTTATTAAAATGAACCTAATTTTTCTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGACCTTTCCCTAATTTTTATTAAAATGAACCTAATTTTTCTAAT  200

seq1  CAGGTTAATTTAAGGATATTGTTAGACATGTAGAAGAACTAAACCAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTAATTTAAGGATATTGTTAGACATGTAGAAGAACTAAACCAGCCC  250

seq1  ACCACATTTAATATTTATGGTGTGACTTAATTTTATCATGTTCTCTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATTTAATATTTATGGTGTGACTTAATTTTATCATGTTCTCTTATC  300

seq1  ATTTTAATAATTACTGTATAATTTTTAGATGTCCAGGAAAGCTAAACCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATAATTACTGTATAATTTTTAGATGTCCAGGAAAGCTAAACCTT  350

seq1  TAAGTAAATTTGTGTGACTCATATTTTATGTTATCATTAATTATAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAATTTGTGTGACTCATATTTTATGTTATCATTAATTATAATTAA  400

seq1  TTCATTATGATTGCATAAAATGACTGCAAGAAGATTTTTAAAAATCTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATGATTGCATAAAATGACTGCAAGAAGATTTTTAAAAATCTAGA  450

seq1  CGCTTATATATGGTTTACATATATGTAGTCAATTTCCATAGTTAATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTATATATGGTTTACATATATGTAGTCAATTTCCATAGTTAATTATA  500

seq1  TAGTTTCTGGGATATTAAATTGTAAGTAGGATAAATCTTGTTGGTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCTGGGATATTAAATTGTAAGTAGGATAAATCTTGTTGGTTTTTT  550

seq1  TTTGGTTTTTTGTTTTTGTTTTTTTTGTTGTTGTTGTTGTTTTTGTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTTGTTTTTGTTTTTTTTGTTGTTGTTGTTGTTTTTGTTTTT  600

seq1  GTTTTGAGTCAAGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAGTCAAGGTTTCTCTGTGTAGCTCTGGCTGTCCTGGAACTCACT  650

seq1  CTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCC  700
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCC  700

seq1  CAAGTGC-TGGGATT-AAAGGCATGTGCCACCACTGCCTGGCAAATCATG  748
      ||||||| ||||||| |||||||||||||||| |||||||||||||||||
seq2  CAAGTGCTTGGGATTAAAAGGCATGTGCCACCTCTGCCTGGCAAATCATG  750

seq1  TTTTCAAATACATTTAACAGTGAAATGTT-TGTTTTATTTAT  789
      |||||||||| ||||||||  |||||||| ||||||||||||
seq2  TTTTCAAATAAATTTAACACCGAAATGTTCTGTTTTATTTAT  792


seq1: chr6_12119229_12119321
seq2: B6Ng01-211P05.g_73_165 (reverse)

seq1  CCCCCCCCCCCAGCATTATAGTAGATCAACTCAAAGGAAGTCACTGCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCAGCATTATAGTAGATCAACTCAAAGGAAGTCACTGCTCT  50

seq1  GAAACAAGTGTGTTCCCTCTTTTGACTCACTACTTTCTTAGAA  93
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAGTGTGTTCCCTCTTTTGACTCACTACTTTCTTAGAA  93


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