BAC Information

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BAC

Clone NameB6Ng01-214E22
Chromosome6 (Build37)
Map Location 121,330,316 - 121,331,318
singlet/doubletsinglet
Overlap geneIqsec3
Upstream geneJarid1a, Il17ra, Cecr6, Cecr5, 1700072O05Rik, Cecr2, Slc25a18, Atp6v1e1, Bcl2l13, Bid, Mical3, LOC100043793, Minpp1-ps, Pex26, Tuba8, Usp18, Slc6a13, Slc6a12
Downstream geneLOC100043486, A2m, EG640530, Mug1, Mug4, Mug2, Mug-ps1, Klrg1, LOC625931, M6pr, Phc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214E22.bB6Ng01-214E22.g
ACCGA031590GA031591
length1,2091,014
definitionB6Ng01-214E22.b B6Ng01-214E22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctagagaagcaatagcagtgattggcatttctagaacccagag
aaccagtgttttctcagccctcggaaaatgcatctccagacttaagttgc
attagggaaaagggccttgtgcacacagatcaacactggagaagccagga
aggttaaacatagaaccttcccttcaaggaagtgagtgcttagctgctct
ttctggaatgtcaggaatgatggagttttacagcctggtgatgctttgct
gtctgatgagactggctctgcccgtgtctaccagaattcacattctacaa
ttcagattcaccattctacagaattcagaaatctcatctctttcctccta
aatcttgagcattgcttttagaccataaacccatccttgggagtgatgtg
gtttgtcctttaacaacagcctaagtggctttgtgttatcttagggccag
gccaggcctagctctcacagacattatgtttacctcagtcaaacttccta
gaccccaaatctctatgtcaacagtacctattcttgtgaaagaagccaga
tgtactttgtaaataacagtggggctgagttaattgttatctgaacacct
tttcccaaaattgcactgtgcttaaatgtggctaaagtacaatgacctgg
gccagaagtctagaagtcttactctagcacggattacaataaaattgcct
tgagtggagtttccttcttacctcaccctgatggtttcccgcctgctgta
aaattgctgaatcaccacagctgatgctgaaacgcaggaccccccccccc
ccccccagagaaggtaagcaacgttttctttgaatagaaattaggagatt
aggaaactcagtcctttcacccaagggaaattaacacggattcgtctaag
ttcttttaaatgaagcattttgttcaatcattgagatatttgtttgtagt
ggcttgtattcttcccacaaattatgttacccaaaaacatgttgcagtgc
ggcaggtaggactaaagggaagccagtccccagtggttttaactgggcca
gtaaagttaccggtggtcaatgcttgggcagagagaccgaggctggacct
taagaatcaggaggacctaggagcgtagagcattcgcatgagagctagga
acagacaactgccaggaagtacagtagtatacacaggcagaacactgctg
agtattcag
gaattctttctgacatttgtactggagagtcactttctcttagtcgaatc
cttgccagtacgatttgtaggcaccatataaatctgtgtcctttctctca
taggtcccttgaaggaggggctgtcatttgctgtggtaattgtgacttag
taacactgtggagttttgaggatctaaaggcccacggaacatccacacca
tgttgcttgccctccacagattggccgatggcctgtaattaggtctacat
tttctcgccaccaaatgtgcatcagggaccctgtggacccccgggaacga
cttgatgacttgtcctgcctatggtcttccgaacctgagctccttctgtt
tctcgcttcccatcctcaggatggtggttttcagccctctgcttcttgaa
gtgcaaaggaaactgcacagttaaggacaccatgaggcaagtccttgggg
aaacacatccagatctgacaggggtttgcggctcccacaggagaagccgg
agggacgagtcatctcagctgagaactgatggtgaaatcctgacagccct
gaaagtgagcagtgacccatatcctgagtccttggaaggtaaagggggct
attggcttaggtgggtggcatttagtcatggtgacataggacgcatatag
atgacatctcagagagcctgaagccttgctgggaaaaggaatgccattct
ttggctggtgatgctgtctagcctcactctggcacggagactagctagag
aggtttggagggcttgggaatgtagaagtccactgtgttcttcactcaag
cagctgtcctgtgcctgtggatgctcagagtgctcttgctataagctctg
agtgtgagatgcaagcaatgaataggctaatgcatgagctgtgcatgggg
gtttcttaatatcttcccatttctcttctaatgtctccatatttgggggg
cttaacagggaggggtgcacaggtctaacttctctcattcttctaccagt
tgggtaagactgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_121330316_121331318
seq2: B6Ng01-214E22.g_64_1077

seq1  GAATTCTTTCTGACATTTGTACTGGAGAGTCACTTTCTCTTAGTCGAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGACATTTGTACTGGAGAGTCACTTTCTCTTAGTCGAATC  50

seq1  CTTGCCAGTACGATTTGTAGGCACCATATAAATCTGTGTCCTTTCTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCAGTACGATTTGTAGGCACCATATAAATCTGTGTCCTTTCTCTCA  100

seq1  TAGGTCCCTTGAAGGAGGGGCTGTCATTTGCTGTGGTAATTGTGACTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTCCCTTGAAGGAGGGGCTGTCATTTGCTGTGGTAATTGTGACTTAG  150

seq1  TAACACTGTGGAGTTTTGAGGATCTAAAGGCCCACGGAACATCCACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTGTGGAGTTTTGAGGATCTAAAGGCCCACGGAACATCCACACCA  200

seq1  TGTTGCTTGCCCTCCACAGATTGGCCGATGGCCTGTAATTAGGTCTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTTGCCCTCCACAGATTGGCCGATGGCCTGTAATTAGGTCTACAT  250

seq1  TTTCTCGCCACCAAATGTGCATCAGGGACCCTGTGGACCCCCGGGAACGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCGCCACCAAATGTGCATCAGGGACCCTGTGGACCCCCGGGAACGA  300

seq1  CTTGATGACTTGTCCTGCCTATGGTCTTCCGAACCTGAGCTCCTTCTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGACTTGTCCTGCCTATGGTCTTCCGAACCTGAGCTCCTTCTGTT  350

seq1  TCTCGCTTCCCATCCTCAGGATGGTGGTTTTCAGCCCTCTGCTTCTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGCTTCCCATCCTCAGGATGGTGGTTTTCAGCCCTCTGCTTCTTGAA  400

seq1  GTGCAAAGGAAACTGCACAGTTAAGGACACCATGAGGCAAGTCCTTGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAAGGAAACTGCACAGTTAAGGACACCATGAGGCAAGTCCTTGGGG  450

seq1  AAACACATCCAGATCTGACAGGGGTTTGCGGCTCCCACAGGAGAAGCCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATCCAGATCTGACAGGGGTTTGCGGCTCCCACAGGAGAAGCCGG  500

seq1  AGGGACGAGTCATCTCAGCTGAGAACTGATGGTGAAATCCTGACAGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACGAGTCATCTCAGCTGAGAACTGATGGTGAAATCCTGACAGCCCT  550

seq1  GAAAGTGAGCAGTGACCCATATCCTGAGTCCTTGGAAGGTAAAGGGGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGAGCAGTGACCCATATCCTGAGTCCTTGGAAGGTAAAGGGGGCT  600

seq1  ATTGGCTTAGGTGGGTGGCATTTAGTCATGGTGACATAGGACGCATATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTAGGTGGGTGGCATTTAGTCATGGTGACATAGGACGCATATAG  650

seq1  ATGACATCTCAGAGAGCCTGAAGCCTTGCTGGGAAAAGGAATGCCATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATCTCAGAGAGCCTGAAGCCTTGCTGGGAAAAGGAATGCCATTCT  700

seq1  TTGGCTGGTGATGCTGTCTAGCCTCACTCTGGCACGGAGACTAGCTAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGGTGATGCTGTCTAGCCTCACTCTGGCACGGAGACTAGCTAGAG  750

seq1  AGGTTTGGAGGGCTTGGGAATGTAGAAGTCCACTGTGTTCTTCACTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGAGGGCTTGGGAATGTAGAAGTCCACTGTGTTCTTCACTCAAG  800

seq1  CAGCTGTCCTGTGCCTGTGGATGCTCAGAGTGCTCTTGCTATAAGCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTCCTGTGCCTGTGGATGCTCAGAGTGCTCTTGCTATAAGCTCTG  850

seq1  AGTGTGAGATGCAAGCAATGAATAGGCTAATGCATGAGCTGTGCAT-GGG  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGTGTGAGATGCAAGCAATGAATAGGCTAATGCATGAGCTGTGCATGGGG  900

seq1  GTTTCTTAATATC-TCCCATTTCTCTTCTAATGTCTCCATATTT-GGGGG  947
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  GTTTCTTAATATCTTCCCATTTCTCTTCTAATGTCTCCATATTTGGGGGG  950

seq1  CT--ACAGG--AGGGTGCACAG--CCCACCTCTCTCACTC-TCTACCAG-  989
      ||  |||||   ||||||||||  |  || ||||||| || |||||||| 
seq2  CTTAACAGGGAGGGGTGCACAGGTCTAACTTCTCTCATTCTTCTACCAGT  1000

seq1  TGGGTAAGACTGAA  1003
      ||||||||||||||
seq2  TGGGTAAGACTGAA  1014