BAC Information

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BAC

Clone NameB6Ng01-216P15
Chromosome6 (Build37)
Map Location 110,018,587 - 110,019,595
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639110, LOC100043720
Downstream geneGrm7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216P15.bB6Ng01-216P15.g
ACCGA033519GA033520
length1,1981,014
definitionB6Ng01-216P15.b B6Ng01-216P15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattcttgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttccatgcttttccccac
tttctcctccataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcacttctgggtcttcaattctattccattgg
tctacttgtctgtctgtataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagattttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcactttccttagttagagtcacgccgagatatttttatatt
attttgtgactattgaagaaggtgttgtttcccttaatttctagctcagc
ctgtttcctcttttgtgtagagaaaggccattgacttgtttgaagttaat
tttatattcaggctacttcacccgaagctgttatcaggttaggagtctct
gggtgattttaagggtcattaatgatcctactcattacatcgcaaggtaa
ttgacttcccttttcaatgtgtgatccgttgagatctcctcttgtatg

gaattctaattctgatacatgtcttagagtgagttaagattctagggatt
atttgttttaattctcaaagggaattctatcactaagaaatcacctctct
gtcgtgctctttctggttggcctgaagctatgatattgttggctctttgg
agccaactactgttttgataggcagagaatatttaagctgaaagccactg
tagctccatagtaaatgagaaaggggaaagctttgtcttcaatactaaag
catgagtttaacttttcattccgcaccttcatctacaaggcattgtagat
tttggtattttcacagcaaaggagagcattagtctggtcctgaggttctc
caaaagtaagaatgctgtgcttaataatctttgagtaacaattattaaaa
taaaatattctgagagatggaggacaggattccacaattattctagtgtg
cttacagatggtataaccatcccagttattatcaaatctagtggattttt
ttgtgtgttcaaggcacatattaataacttgaaaagcaacacttgtgtca
atgtttggataatctggttttttaaagttctctcaaaattcagagaggac
ttaaatgagacataaaatttatttcttttaagtaatataaaagaagttta
tggagatacataataaatagattaagtatacaagattttcatttgtgaaa
atttgtcaaagagctggagtagggcaaggaaaaatgagatagaagatttt
aaagaatctgttgaaaataagtaaaactactccccccccccaaaaaaaaa
aaacaaacaaaaaaacaggaaacataaaccaaattcatatcagttcttgc
aagagactttgtgcatagtgttaaccatgtgacatcacctagcttcaaga
aagcctgatttcttgactgatgaccaagggccattgataaatttagaaaa
ataaattagaagaaaccatttgcagtattgaacaacataatattaatgaa
tacaataaatgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110018587_110019595
seq2: B6Ng01-216P15.g_65_1078

seq1  GAATTCTAATTCTGATACATGTCTTAGAGTGAGTTAAGATTCTAGGGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTCTGATACATGTCTTAGAGTGAGTTAAGATTCTAGGGATT  50

seq1  ATTTGTTTTAATTCTCAAAGGGAATTCTATCACTAAGAAATCACCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTTAATTCTCAAAGGGAATTCTATCACTAAGAAATCACCTCTCT  100

seq1  GTCGTGCTCTTTCTGGTTGGCCTGAAGCTATGATATTGTTGGCTCTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTGCTCTTTCTGGTTGGCCTGAAGCTATGATATTGTTGGCTCTTTGG  150

seq1  AGCCAACTACTGTTTTGATAGGCAGAGAATATTTAAGCTGAAAGCCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACTACTGTTTTGATAGGCAGAGAATATTTAAGCTGAAAGCCACTG  200

seq1  TAGCTCCATAGTAAATGAGAAAGGGGAAAGCTTTGTCTTCAATACTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCATAGTAAATGAGAAAGGGGAAAGCTTTGTCTTCAATACTAAAG  250

seq1  CATGAGTTTAACTTTTCATTCCGCACCTTCATCTACAAGGCATTGTAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTTTAACTTTTCATTCCGCACCTTCATCTACAAGGCATTGTAGAT  300

seq1  TTTGGTATTTTCACAGCAAAGGAGAGCATTAGTCTGGTCCTGAGGTTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATTTTCACAGCAAAGGAGAGCATTAGTCTGGTCCTGAGGTTCTC  350

seq1  CAAAAGTAAGAATGCTGTGCTTAATAATCTTTGAGTAACAATTATTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTAAGAATGCTGTGCTTAATAATCTTTGAGTAACAATTATTAAAA  400

seq1  TAAAATATTCTGAGAGATGGAGGACAGGATTCCACAATTATTCTAGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTCTGAGAGATGGAGGACAGGATTCCACAATTATTCTAGTGTG  450

seq1  CTTACAGATGGTATAACCATCCCAGTTATTATCAAATCTAGTGGATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGATGGTATAACCATCCCAGTTATTATCAAATCTAGTGGATTTTT  500

seq1  TTGTGTGTTCAAGGCACATATTAATAACTTGAAAAGCAACACTTGTGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTTCAAGGCACATATTAATAACTTGAAAAGCAACACTTGTGTCA  550

seq1  ATGTTTGGATAATCTGGTTTTTTAAAGTTCTCTCAAAATTCAGAGAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGGATAATCTGGTTTTTTAAAGTTCTCTCAAAATTCAGAGAGGAC  600

seq1  TTAAATGAGACATAAAATTTATTTCTTTTAAGTAATATAAAAGAAGTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAGACATAAAATTTATTTCTTTTAAGTAATATAAAAGAAGTTTA  650

seq1  TGGAGATACATAATAAATAGATTAAGTATACAAGATTTTCATTTGTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATACATAATAAATAGATTAAGTATACAAGATTTTCATTTGTGAAA  700

seq1  ATTTGTCAAAGAGCTGGAGTAGGGCAAGGAAAAATGAGATAGAAGATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCAAAGAGCTGGAGTAGGGCAAGGAAAAATGAGATAGAAGATTTT  750

seq1  AAAGAATCTGTTGAAAATAAGTAAAACTACTCCCCCCCCCC-CAAAAAAA  799
      |||||||||||||||||||||||||||||||||||||||||  |||||||
seq2  AAAGAATCTGTTGAAAATAAGTAAAACTACTCCCCCCCCCCAAAAAAAAA  800

seq1  AAACAAAC-AAAAAACAGGAAACATAAACCAAATTCATATCAGTTCTTGC  848
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAAAAAACAGGAAACATAAACCAAATTCATATCAGTTCTTGC  850

seq1  AAGAGACTTTGTGCATAGTGTTAACCATGTGACATCACCTAGCTTCAAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACTTTGTGCATAGTGTTAACCATGTGACATCACCTAGCTTCAAGA  900

seq1  AAGCCTGATTTC-TGACTGATGACCAAGGG-CATTGATAAAATTTAG-AA  945
      |||||||||||| ||||||||||||||||| ||||||| |||||||| ||
seq2  AAGCCTGATTTCTTGACTGATGACCAAGGGCCATTGAT-AAATTTAGAAA  949

seq1  AATAAATTAGAAGAAACCATTTGCAGTATTTGACAACATAATATTAATG-  994
      ||||||||||||||||||||||||||||||  ||||||||||||||||| 
seq2  AATAAATTAGAAGAAACCATTTGCAGTATTGAACAACATAATATTAATGA  999

seq1  ATACAATAAATGTTT  1009
      |||||||||||||||
seq2  ATACAATAAATGTTT  1014


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