BAC Information

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BAC

Clone NameB6Ng01-218E02
Chromosome6 (Build37)
Map Location 110,739,596 - 110,740,610
singlet/doubletsinglet
Overlap geneGrm7
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218E02.bB6Ng01-218E02.g
ACCGA034431GA034432
length1,2151,016
definitionB6Ng01-218E02.b B6Ng01-218E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcatctgaaaaaatg
ttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctgtcgatgatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtcgggtggttccgca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgagc
atatatccagaagatgtcccaactggaaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaactcagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaataatgaatttatgaaattcctagccaa
atggatgggcctggaggccatcatcctgagtgtggtaacacattcacaaa
ggaactcacacaatatgtactcagtgataactggatattaccccaaaact
taggctacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagcagtgacga
aaggatggaccatctagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatgcactagcaagattttgctgaaa
ggacccagatgtagctgtctcttgtgagactatgccagggcctagcaaac
acagaagtggatgctcacagtcagctatttggatggatcacagggctccc
aatggaggagctagagaaagtacccaaggagctaaagggatctgcaaccc
tataggtgaaacacatttatgaagtaccagttcccgggagcttctttgac
tctagctgcatatgttatcaaagatggccctagtcgggcatcactgtaag
gagaggccattgggacatgcaaactttatatgccctagctataggcgaac
tcatgtcctaaaaatattgtaatcggctggctatggccaaggtcggcgcg
taactctcatcccta

gaattctcattccatgcaactattgggaggaggcccttttcatggtgata
cctatgaccctgcagggggggctgcttgagtacctttctaagatagtacc
tcagagcctggcagtggtggtgctggccttttaatcccagcacttgggag
gcagaggcaggtggatttctgagtttgaggccagccgggtctacagagtg
agttctaggacagtttgggctacactgagaaacctgtctcaaaaaaaaaa
aatattgtgtctcagttcagttctgtgaagagtggttcaagtgacagcaa
gaagagaagaaaaccttctgtgatatgttctcaggagtcctatattgttc
ttctctcttgtgtactaagccagtttggtaacttcagtacagactccatg
agagggcaactgtaccctactttccaaaatggtgctaagagacatttggt
aatttttttaggtgatattaccttttattcttaggagaattattcttatt
tatagctttacatttttctttttttattaattaattattttttacactac
ataatttatacccctccccatccaccctctgactgttgttttgcatccca
cacatactccccacatccctctctccatgtggatgtcctcacaccccacc
ccacctgacctctaaactccctggggtctccagtctcttgaaggttaggt
gcatcatatctgaatgaacacagacccggaagtcgtctactgtatgtgta
ttgggatcctcatatcagctggtgtatgctgtctgtttggtggtccagtg
tttgagagatctccagggtatagatgaattgtgactgttggtcctcctgc
agggtcacccttctcctcagcttctttcagctttacctaaattcaacaac
aggggtcagctgcttctgttcattggttgtatgcaaatatcttcatctga
ctctttcagctgcttgttgagtcttccagaaatgtggtcatgctagtctt
tttttgtgagtgctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110739596_110740610
seq2: B6Ng01-218E02.g_64_1079

seq1  GAATTCTCATTCCATGCAACTATTGGGAGGAGGCCCTTTTCATGGTGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTCCATGCAACTATTGGGAGGAGGCCCTTTTCATGGTGATA  50

seq1  CCTATGACCCTGCAGGGGGGGCTGCTTGAGTACCTTTCTAAGATAGTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGACCCTGCAGGGGGGGCTGCTTGAGTACCTTTCTAAGATAGTACC  100

seq1  TCAGAGCCTGGCAGTGGTGGTGCTGGCCTTTTAATCCCAGCACTTGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCCTGGCAGTGGTGGTGCTGGCCTTTTAATCCCAGCACTTGGGAG  150

seq1  GCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCGGGTCTACAGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGTGGATTTCTGAGTTTGAGGCCAGCCGGGTCTACAGAGTG  200

seq1  AGTTCTAGGACAGTTTGGGCTACACTGAGAAACCTGTCTCAAAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAGGACAGTTTGGGCTACACTGAGAAACCTGTCTCAAAAAAAAAA  250

seq1  AATATTGTGTCTCAGTTCAGTTCTGTGAAGAGTGGTTCAAGTGACAGCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGTGTCTCAGTTCAGTTCTGTGAAGAGTGGTTCAAGTGACAGCAA  300

seq1  GAAGAGAAGAAAACCTTCTGTGATATGTTCTCAGGAGTCCTATATTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAGAAAACCTTCTGTGATATGTTCTCAGGAGTCCTATATTGTTC  350

seq1  TTCTCTCTTGTGTACTAAGCCAGTTTGGTAACTTCAGTACAGACTCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTGTGTACTAAGCCAGTTTGGTAACTTCAGTACAGACTCCATG  400

seq1  AGAGGGCAACTGTACCCTACTTTCCAAAATGGTGCTAAGAGACATTTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCAACTGTACCCTACTTTCCAAAATGGTGCTAAGAGACATTTGGT  450

seq1  AATTTTTTTAGGTGATATTACCTTTTATTCTTAGGAGAATTATTCTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTTTAGGTGATATTACCTTTTATTCTTAGGAGAATTATTCTTATT  500

seq1  TATAGCTTTACATTTTTCTTTTTTTATTAATTAATTATTTTTTACACTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGCTTTACATTTTTCTTTTTTTATTAATTAATTATTTTTTACACTAC  550

seq1  ATAATTTATACCCCTCCCCATCCACCCTCTGACTGTTGTTTTGCATCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTATACCCCTCCCCATCCACCCTCTGACTGTTGTTTTGCATCCCA  600

seq1  CACATACTCCCCACATCCCTCTCTCCATGTGGATGTCCTCACACCCCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTCCCCACATCCCTCTCTCCATGTGGATGTCCTCACACCCCACC  650

seq1  CCACCTGACCTCTAAACTCCCTGGGGTCTCCAGTCTCTTGAAGGTTAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGACCTCTAAACTCCCTGGGGTCTCCAGTCTCTTGAAGGTTAGGT  700

seq1  GCATCATATCTGAATGAACACAGACCCGGAAGTCGTCTACTGTATGTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATATCTGAATGAACACAGACCCGGAAGTCGTCTACTGTATGTGTA  750

seq1  TTGGGATCCTCATATCAGCTGGTGTATGCTGTCTGTTTGGTGGTCCAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATCCTCATATCAGCTGGTGTATGCTGTCTGTTTGGTGGTCCAGTG  800

seq1  TTTGAGAGATCTCCAGGGTATAGATGAATTGTGACTGTTGGTCCTCCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAGATCTCCAGGGTATAGATGAATTGTGACTGTTGGTCCTCCTGC  850

seq1  AGGGTCACCCTTCTCCTCAGCTTCTTTCAGCTTTACCT-AATTCAACAAC  899
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGGTCACCCTTCTCCTCAGCTTCTTTCAGCTTTACCTAAATTCAACAAC  900

seq1  AGGGGTCAGCTGCTTCTGTTCATTGGTTGTATGCAAATATCTTCATCTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCAGCTGCTTCTGTTCATTGGTTGTATGCAAATATCTTCATCTGA  950

seq1  CTCTTTCAGCTGCTTGTTGAGTCTTCCAG-AATGTGGTCATGCTAGGTCC  998
      ||||||||||||||||||||||||||||| ||||||||||||||| ||| 
seq2  CTCTTTCAGCTGCTTGTTGAGTCTTCCAGAAATGTGGTCATGCTA-GTCT  999

seq1  TTTTTTGTGAGTGCTCC  1015
      |||||||||||||||||
seq2  TTTTTTGTGAGTGCTCC  1016


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