BAC Information

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BAC

Clone NameB6Ng01-218H04
Chromosome6 (Build37)
Map Location 109,480,890 - 109,481,987
singlet/doubletsinglet
Overlap genenone
Upstream geneItpr1, LOC677205, Bhlhb2, Arl8b, Edem1, EG627371, LOC639110, LOC100043720
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218H04.bB6Ng01-218H04.g
ACCGA034574GA034575
length1,1921,101
definitionB6Ng01-218H04.b B6Ng01-218H04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagagacaccaaaacaagataggctattgttatatccctgttg
cctctgtaaatagaaagtaacccttttgatggagatactacatactttag
acatagggtgtggagaaataagtctagatcttatctggaagcctcctcat
ggagggctagctctaatagttttagaaagagatatcaacagacaaaagca
atcaatagtcctatacatctataatgtcaaaataatcacaacaatgacca
ccataggaatatatcctggaaggtaaaatagtggcagttatatcctggga
gctacacaactgaccttaggtccacttactgggaagtgattcatgcctga
cactttaaatttagccaactacctatggatagtaaggcatagagcctaga
agacaacctattaatgacactctcttgacagtataatctctctgcatttt
aaatattcatccttacacccacagagaattgtggctctcaccccacatga
aagaagcctcttcttgcagttcgtggagaccattacagaaaattagactg
gtccatactgtgtggaagcacctatcaataaaacctgatggccagtgagc
tgaggcagaattagaaagtggggcatacagtagagagaattctgggaaag
agtcaagcaaaatgtttttctccagacttgaaggagagggatatatgaaa
cctgaaactaaggagaggtaacttaccatgtaacacacatagactagaac
aaaaagttacaagctactcagggaacaagccaaagtttatggcttagata
tttattcataaataagtagcctctcagttattaatcaagaattggggcac
agatgaaaagcctgcttttgtaattggcatctgatatgttaggcagaaat
ccaagtagtagggtcctgtaagctcacaaaaccgggcacagaaacagcag
ctttctgggtagaaaagatggttccttagcaaccagagtttctcagcagg
tccagtgctcatgaatacttacagacagacgacgacgaccagaccccgac
ccccagaccacaccacaccacgacccacaccactcactctacacgaactc
acatcacggacactctactacaactctacactcactactagggtaagcat
gttggcattctgaatacgtgtaccaaaagtgactcaatgggg

gaattcactatgtagaccaggctagtctagagatcacagagatctgcctg
cctctacctccctaatgctgggattaaaggtgtgcaccactatacccaga
ataatttagttttattaatagttgctattcttataaaggtgagataaatt
ctcaaagtaattttaattttcatttttttggcctctaaatttatttgcca
caatgtaataacaaaatatagtttttcacagacatgtttgaaatgatagt
caattggcaaaaataataaaacattgtggaaactgagagatggcttccaa
gtagacaaattggaattcttaaaaggcttttgccctgatgtgacattagc
agactcattagagaagtagattaggccagttgtgccactgttctgtcccc
agtcagaatcatgtcaaagttgttttatatgttgcaaccattgctgttat
ctttctgtctggtaattcagcccattcattttcctatgttttacaaagta
ttttcaatgatttttagaattaaaaaaaatgctgcgcttctattcctgct
tagatattaatgtgttccaaaattaccttcccaatcttttctaatatgga
tagaattggtggaatatccttaacatactttttgcccatttccttttttt
tgttttttgttttttaaggaaaatatctcatttgttgattgatagtttta
ttttctggcgttcaacatttgcagatacttatatagtgttgctgtaatta
ctttatataaagtatacctggaaaatatttttctttcattttgtaggcta
tttactctgttgatattttctgtattctgtgtagaagccttttaatttca
tatgaccccattcacaaaatatttgtgtctatttcctctgttagatttct
tattgcttatgcctacattttaaagtgtattcctttatcttgttttaagt
taagatattgggcacagattgaattaatgtttgtgtgaggtgatatatta
tgaatctaatcttattcttctgcagtagtcattcaattttttttcagaat
acacttgctgaaaagaattattattttccagtcatgttttttcgatgccc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109480890_109481987
seq2: B6Ng01-218H04.g_65_1165

seq1  GAATTCACTATGTAGACCAGGCTAGTCTAGAGATCACAGAGATCTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATGTAGACCAGGCTAGTCTAGAGATCACAGAGATCTGCCTG  50

seq1  CCTCTACCTCCCTAATGCTGGGATTAAAGGTGTGCACCACTATACCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCTCCCTAATGCTGGGATTAAAGGTGTGCACCACTATACCCAGA  100

seq1  ATAATTTAGTTTTATTAATAGTTGCTATTCTTATAAAGGTGAGATAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTAGTTTTATTAATAGTTGCTATTCTTATAAAGGTGAGATAAATT  150

seq1  CTCAAAGTAATTTTAATTTTCATTTTTTTGGCCTCTAAATTTATTTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGTAATTTTAATTTTCATTTTTTTGGCCTCTAAATTTATTTGCCA  200

seq1  CAATGTAATAACAAAATATAGTTTTTCACAGACATGTTTGAAATGATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTAATAACAAAATATAGTTTTTCACAGACATGTTTGAAATGATAGT  250

seq1  CAATTGGCAAAAATAATAAAACATTGTGGAAACTGAGAGATGGCTTCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGCAAAAATAATAAAACATTGTGGAAACTGAGAGATGGCTTCCAA  300

seq1  GTAGACAAATTGGAATTCTTAAAAGGCTTTTGCCCTGATGTGACATTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAAATTGGAATTCTTAAAAGGCTTTTGCCCTGATGTGACATTAGC  350

seq1  AGACTCATTAGAGAAGTAGATTAGGCCAGTTGTGCCACTGTTCTGTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCATTAGAGAAGTAGATTAGGCCAGTTGTGCCACTGTTCTGTCCCC  400

seq1  AGTCAGAATCATGTCAAAGTTGTTTTATATGTTGCAACCATTGCTGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAATCATGTCAAAGTTGTTTTATATGTTGCAACCATTGCTGTTAT  450

seq1  CTTTCTGTCTGGTAATTCAGCCCATTCATTTTCCTATGTTTTACAAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCTGGTAATTCAGCCCATTCATTTTCCTATGTTTTACAAAGTA  500

seq1  TTTTCAATGATTTTTAGAATTAAAAAAAATGCTGCGCTTCTATTCCTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATGATTTTTAGAATTAAAAAAAATGCTGCGCTTCTATTCCTGCT  550

seq1  TAGATATTAATGTGTTCCAAAATTACCTTCCCAATCTTTTCTAATATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATATTAATGTGTTCCAAAATTACCTTCCCAATCTTTTCTAATATGGA  600

seq1  TAGAATTGGTGGAATATCCTTAACATACTTTTTGCCCATTTCCTTTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGGTGGAATATCCTTAACATACTTTTTGCCCATTTCCTTTTTTT  650

seq1  TGTTTTTTGTTTTTTAAGGAAAATATCTCATTTGTTGATTGATAGTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTGTTTTTTAAGGAAAATATCTCATTTGTTGATTGATAGTTTTA  700

seq1  TTTTCTGGCGTTCAACATTTGCAGATACTTATATAGTGTTGCTGTAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGCGTTCAACATTTGCAGATACTTATATAGTGTTGCTGTAATTA  750

seq1  CTTTATATAAAGTATACCTGGAAAATATTTTTCTTTCATTTTGTAGGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATAAAGTATACCTGGAAAATATTTTTCTTTCATTTTGTAGGCTA  800

seq1  TTTACTCTGTTGATATTTTCTGTATTCTGTGTAGAAGCCTTTTAATTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCTGTTGATATTTTCTGTATTCTGTGTAGAAGCCTTTTAATTTCA  850

seq1  TATGACCCCATTCACAAAATATTTGTGTCTATTTCCTCTGTTAGATTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACCCCATTCACAAAATATTTGTGTCTATTTCCTCTGTTAGATTTCT  900

seq1  TATTGCTTATGCCTACATTTTAAAGTGTATTCCTTTATCTTGTTTTAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTTATGCCTACATTTTAAAGTGTATTCCTTTATCTTGTTTTAAGT  950

seq1  TAAGATATTGGGCACAGATTGAATTAATGTTTGTGTGAGGTGATATA-TA  999
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAAGATATTGGGCACAGATTGAATTAATGTTTGTGTGAGGTGATATATTA  1000

seq1  TGAATCTAATCTTATTCTTCTGCAGGTAGTCATTCAA-TTTTTTTCAGAA  1048
      |||||||||||||||||||||||| |||||||||||| ||||||||||||
seq2  TGAATCTAATCTTATTCTTCTGCA-GTAGTCATTCAATTTTTTTTCAGAA  1049

seq1  TACACTTGCTGAAAAG-ATTATTATTTTTCAGTCCATGTTTTT--GATGC  1095
      |||||||||||||||| ||||||||||| |||| |||||||||  |||||
seq2  TACACTTGCTGAAAAGAATTATTATTTTCCAGT-CATGTTTTTTCGATGC  1098

seq1  CCT  1098
      |||
seq2  CCT  1101


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