MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-219B15
Chromosome	6 (Build37)
Map Location	107,424,014 - 107,579,388
singlet/doublet	doublet
Overlap gene	Lrrn1
Upstream gene	Cntn4, Il5ra, Trnt1, Crbn, Ppia-ps6_1128.1
Downstream gene	Setmar, Sumf1, LOC100043718, Itpr1, LOC677205
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cntn4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269784 MGI:1095737
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il5ra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16192 MGI:96558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trnt1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70047 MGI:1917297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crbn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58799 MGI:1913277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ppia-ps6_1128.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606533
definition	note : peptidylprolyl isomerase A pseudogene 6_1128.1 pseudo : _no_value

name	Lrrn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16979 MGI:106038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Setmar (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74729 MGI:1921979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 11 ESTs, 4 Proteins

name	Sumf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58911 MGI:1889844
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043718 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 344 ESTs, 9 Proteins

name	Itpr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16438 MGI:96623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC677205 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 233 ESTs, 13 Proteins pseudo : _no_value

name	Cntn4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382585 GeneID:269784 MGI:1095737
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin 4 transcript_id : NM_173004.2

name	Il5ra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130832 GeneID:16192 MGI:96558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 5 receptor, alpha transcript_id : NM_008370.2

name	Trnt1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130356 GeneID:70047 MGI:1917297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tRNA nucleotidyl transferase, CCA-adding, 1 transcript_id : NM_027296.2

name	Crbn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90403611 GeneID:58799 MGI:1913277
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cereblon transcript_id : NM_021449.2

name	Crbn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90403605 GeneID:58799 MGI:1913277
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cereblon transcript_id : NM_175357.2

name	Lrrn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365188 GeneID:16979 MGI:106038
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat protein 1, neuronal transcript_id : NM_008516.2

name	Setmar (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378019 GeneID:74729 MGI:1921979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 4 Proteins product : SET domain and mariner transposase fusion gene transcript_id : XM_982623.1

name	Sumf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144094255 GeneID:58911 MGI:1889844
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sulfatase modifying factor 1 transcript_id : NM_145937.2

name	LOC100043718 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255393 GeneID:100043718
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 344 ESTs, 9 Proteins product : similar to rat ribosomal protein L36 transcript_id : XM_001480721.1

name	Itpr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475598 GeneID:16438 MGI:96623
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol 1,4,5-triphosphate receptor 1 transcript_id : NM_010585.2

name	Cntn4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370508 CCDS:CCDS20395.1 GeneID:269784 MGI:1095737
definition	GO_component : GO:0030424 - axon [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] [Evidence IEA] GO_function : GO:0048503 - GPI anchor binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007411 - axon guidance [Evidence ISS]; GO:0007413 - axonal fasciculation [Evidence ISS]; GO:0007420 - brain development [Evidence ISS]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0045665 - negative regulation of neuron differentiation [Evidence ISS]; GO:0007399 - nervous system development [Evidence ISS]; GO:0031175 - neurite development [Evidence ISS]; GO:0007158 - neuron adhesion [Evidence ISS]; GO:0048167 - regulation of synaptic plasticity [Evidence ISS] codon_start : 1 exception : mismatches in translation note : axonal-associated cell adhesion molecule product : contactin 4 protein_id : NP_766592.1

name	Il5ra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680431 CCDS:CCDS20396.1 GeneID:16192 MGI:96558
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004896 - hematopoietin/interferon-class (D200-domain) cytokine receptor activity [Evidence IEA]; GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 note : IL-5 receptor alpha chain product : interleukin 5 receptor, alpha protein_id : NP_032396.1

name	Trnt1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859692 CCDS:CCDS20397.1 GeneID:70047 MGI:1917297
definition	GO_component : GO:0005739 - mitochondrion [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004810 - tRNA adenylyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0000049 - tRNA binding [Evidence ISS]; GO:0009022 - tRNA nucleotidyltransferase activity [Evidence ISS] GO_process : GO:0006396 - RNA processing [Evidence IEA]; GO:0042780 - tRNA 3'-processing [Evidence ISS]; GO:0008033 - tRNA processing [Evidence ISS] codon_start : 1 note : tRNA adenylyltransferase, mitochondrial product : tRNA nucleotidyl transferase, CCA-adding, 1 protein_id : NP_081572.1

name	Crbn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90403612 GeneID:58799 MGI:1913277
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006510 - ATP-dependent proteolysis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; novel lethal product : cereblon isoform 1 protein_id : NP_067424.2

name	Crbn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202023 GeneID:58799 MGI:1913277
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006510 - ATP-dependent proteolysis [Evidence IEA]; GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; novel lethal product : cereblon isoform 2 protein_id : NP_780566.1

name	Lrrn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678724 CCDS:CCDS20399.1 GeneID:16979 MGI:106038
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat protein 1, neuronal protein_id : NP_032542.1

name	Setmar (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378020 GeneID:74729 MGI:1921979
definition	codon_start : 1 product : SET domain and mariner transposase fusion protein_id : XP_987717.1

name	Sumf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144094256 GeneID:58911 MGI:1889844
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IPI] GO_process : GO:0030279 - negative regulation of ossification [Evidence IMP]; GO:0016567 - protein ubiquitination [Evidence IMP] codon_start : 1 product : sulfatase modifying factor 1 precursor protein_id : NP_666049.2

name	LOC100043718 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255394 GeneID:100043718
definition	codon_start : 1 product : similar to rat ribosomal protein L36 protein_id : XP_001480771.1

name	Itpr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754390 GeneID:16438 MGI:96623
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0005789 - endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005220 - inositol 1,4,5-triphosphate-sensitive calcium-release channel activity [Evidence IEA]; GO:0008095 - inositol-1,4,5-triphosphate receptor activity [Evidence TAS]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence ISS] [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : InsP3R type I; opisthotonus; InsP>3 product : inositol 1,4,5-triphosphate receptor 1 protein_id : NP_034715.1

name	(CDS detail)
type	STS
link
xref	UniSTS:130942
definition	standard_name : D6Mit39

name	(CDS detail)
type	STS
link
xref	UniSTS:125903
definition	standard_name : X99043

name	(CDS detail)
type	STS
link
xref	UniSTS:159553
definition	standard_name : D90205

name	(CDS detail)
type	STS
link
xref	UniSTS:143573
definition	standard_name : Il5ra

name	(CDS detail)
type	STS
link
xref	UniSTS:210835
definition	standard_name : RH127525

name	(CDS detail)
type	STS
link
xref	UniSTS:179427
definition	standard_name : AW108261

name	(CDS detail)
type	STS
link
xref	UniSTS:161528
definition	standard_name : RH124706

name	(CDS detail)
type	STS
link
xref	UniSTS:162704
definition	standard_name : RH125992

name	(CDS detail)
type	STS
link
xref	UniSTS:178496
definition	standard_name : AI987788

name	(CDS detail)
type	STS
link
xref	UniSTS:454319
definition	standard_name : stSG621614

name	(CDS detail)
type	STS
link
xref	UniSTS:125392
definition	standard_name : MHAa84g5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130900
definition	standard_name : D6Mit35

name	(CDS detail)
type	STS
link
xref	UniSTS:124389
definition	standard_name : 41.MHAa63d5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:185676
definition	standard_name : D45913

name	(CDS detail)
type	STS
link
xref	UniSTS:123844
definition	standard_name : 29.MHAa64g5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:116327
definition	standard_name : D6Mit105

name	(CDS detail)
type	STS
link
xref	UniSTS:124070
definition	standard_name : 34.MMHAP12FRD10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159552
definition	standard_name : AI463102

name	(CDS detail)
type	STS
link
xref	UniSTS:179428
definition	standard_name : AI851573

name	(CDS detail)
type	STS
link
xref	UniSTS:123199
definition	standard_name : 14.MMHAP17FE2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:124048
definition	standard_name : 33.MMHAP69FLC6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:123615
definition	standard_name : 23.MMHAP7FLH2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:143635
definition	standard_name : Itpr1

name	(CDS detail)
type	STS
link
xref	UniSTS:235514
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224883
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:208007
definition	standard_name : AI267118

name	(CDS detail)
type	STS
link
xref	UniSTS:460154
definition	standard_name : stSG633507

name	LOC677205 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255395 GeneID:677205
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 233 ESTs, 13 Proteins product : similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 pseudo : _no_value transcript_id : XR_034818.1

clone name	MSMg01-513M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-375D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530I16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-470I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-234N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201C02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179O02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-219B15.b	B6Ng01-219B15.g
ACC	GA035045	GA035046
length	465	1,137
definition	B6Ng01-219B15.b	B6Ng01-219B15.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(107,578,918 - 107,579,388)	(107,424,014 - 107,425,156)
sequence	aatagcacatctttatgttgttcattgctcccaaatggtggtgggttccc ttttgggaaggtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtttgt ttttttgtgtatttttttatactctatctgaattaaacttgtggtccttt tgttctagttggtggaatttcatggtggtttacagatattaaaattaaga aaacacatttaaaatgaaaactacagcccatgttcacattgtctttgttg gatgcaattgatttttcagctaatggtctttgggcttaacaggttattac atttttattgacctttgctgtgagaactctaaatgtcctacatttgggtg aactgtttgaaaactggctttctaagatgaggtttcatggcaaaaaggca tatttttatcctttcatagatgacaaccctagcaaggcttgtttgattta agaatatctcctgtg	gaattcctgagtatgtctaaactataggcaaagaaaaacagggaagtatt tcattcattcatcaattcatccattcacccattcattcactcattcactc attcactcatccaaaaacatttctttatcgacaagtatgcacttggcagt tgttaagcgctggtgataaaagcatgaaacaaatcctgtttcaatcttca gtgagctccctgtctagtgtgagacatttccacagcttgctgtaagaaaa tataagcagtgtagagacagctgaatgcatgggttgcagctgctccaagc cagctgttaggaagctagggagagcttctggaagaacgaaatgacagcta ttgcaacaccagaggagaaaaccctatcatgcatgtccagggaaacagtc ctagagaaggatggcttttgttctggaatcacagacagaggttagggatc gggggaagaaataaagcttaagtctttggtggggtgcctatgtgtaagca ggtccaacccaggtttgcctttctaagcattgtctctctctactgttgca tccttgagaatgttcaagttgtactaccatggagatttgatttgtggatt tggtagttgactcctacctagtccacagtactagcatcaaggaagaggaa agaaacaacaaggtatattgcacctcctctgtgtaggccatgatataaag tcagaagacacttttattcacaaataaatacatgataagggaaggattca ccctctcccaacaggaatctgattagcttttcagctagaaaggtgccctg ctgtccagaaaggacctgggaggaacacctgtcccaccacgtgcttgggg cctgaaatacattctaaagctgagtgtaccaggctggtttccacagcacc aggtaggtctgactccctttccctggttgggaaaccttcagtctctggag ctcaagattttcccttggttttaagaacactcaacatttctagatttttt tccctcttttaatggaaaacattcccttcggatccatttctatagaatat agaaaccagactcattctctttttatcagaagcatcttgagcaattccct actaggaagccctttcagtgtggtcctatgctgatcg
quality values	Open. Hide. 16 62 62 59 59 59 59 51 49 59 59 62 62 59 62 59 59 59 62 59 59 62 49 36 62 62 56 43 43 38 43 33 35 56 62 62 62 59 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 59 62 62 62 62 62 62 62 56 54 49 49 49 49 49 54 62 62 62 62 54 54 54 54 62 62 62 59 62 62 59 62 62 62 56 34 34 48 49 56 54 54 56 56 56 56 12 17 13 10 13 13 12 34 28 34 34 28 23 34 36 29 45 28 23 35 39 35 23 29 33 43 46 16 43 51 51 56 46 48 38 40 28 34 34 38 27 32 27 23 27 26 23 27 27 27 24 34 34 48 36 27 36 36 29 38 43 38 18 38 39 51 59 50 38 46 46 23 34 23 27 34 18 13 13 23 9 13 18 13 23 18 23 12 23 13 18 12 14 12 18 24 22 16 27 13 21 18 43 30 23 13 24 18 30 34 23 34 27 34 22 21 29 21 13 34 45 29 23 34 34 24 14 18 11 10 27 18 13 23 18 23 28 12 19 15 15 13 23 18 28 27 39 21 13 13 12 18 18 27 7 26 12 13 13 12 12 6 13 13 8 18 18 27 18 23 16 27 23 23 27 24 26 30 13 28 19 23 18 19 5 18 7 19 23 35 30 22 10 13 9 5 17 10 16 11 14 13 13 13 9 12 9 18 12 13 10 21 18 5 10 18 10 12 10 10 13 12 27 24 27 27 23 13 18 18 8 11 10 7 18 18 12 11 18 18 12 8 13 27 12 11 18 20 10 10 11 7 14 11 16 11 27 23 23 28 13 34 23 20 10 12 11 13 5 11 11 23 34 16 18 9 11 13 10 12 23 11 18 10 26 7 8 21 19 11 23 11 8 27 34 34 43 31 23 22 24 49 21 29 27 40 18 13 17 39 34 5 18 27 24 43 7 9 18 13 16 10 13 11 13 22 12 12 18 21 5 7 7 15 10 23 28 25 31 20 18 22 14 18 10 21 13 7 23 14 16 23 19 18 13 18 26 21	Open. Hide. 62 47 56 47 62 62 62 62 62 44 30 35 28 26 33 32 32 40 38 45 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 59 62 62 59 59 62 54 54 59 62 62 59 59 62 59 62 62 62 62 54 59 62 62 59 59 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 56 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 54 54 58 58 58 58 58 58 54 54 58 58 58 58 54 58 36 26 58 46 41 45 41 58 54 53 58 54 54 58 58 54 52 58 58 54 58 42 38 49 58 58 54 50 41 24 58 58 58 54 54 58 58 54 54 58 54 58 42 58 58 58 54 52 58 48 58 58 58 49 46 54 51 58 52 50 45 58 58 51 51 58 51 58 50 54 39 50 52 47 46 58 58 54 54 52 51 53 50 47 47 58 58 54 41 58 29 58 51 58 58 50 51 58 58 51 50 25 43 28 48 44 58 52 39 41 21 30 58 58 50 39 26 32 41 51 48 49 37 51 39 41 54 51 35 36 41 18 31 50 50 41 32 29 37 52 39 58 49 52 41 50 35 33 58 53 25 39 25 31 50 41 58 58 29 35 39 51 51 24 53 41 54 47 38 24 54 49 52 39 47 22 32 46 49 40 32 39 28 54 42 45 37 16 54 38 35 35 41 37 53 54 51 40 40 49 41 54 49 29 37 27 19 32 37 37 29 33 37 39 40 53 15 36 42 26 40 53 54 54 47 33 32 31 47 28 25 36 32 52 15 33 17 6 20 17 46 32 27 41 30 40 35 33 33 23 23 24 40 40 33 21 31 37 20 22 31 31 40 10 29 13 30 28 29 31 25 11 27 30 41 33 19 46 31 31 26 40 29 32 20 26 31 31 35 30 31 46 40 22 30 33 31 30 30 46 32 30 31 31 22 31 42 42 31 43 41 33 30 29 31 24 42 8 24 29 19 26 25 23 20 20 23 34 36 25 39 8 47 39 27 17 11 30 18 13 19 29 27 24 9 9 24 18 24 12 36 19 29 31 33 42 14 21 26 44 36 13 35 11 20 5 6 9 25 28 9 6 8 37 11 30 38 25 13 33 26 42 21 11 12 20 21 32 21 17 7 10 31 11 22 32 22 23 15 16 32 22 43 39 27 19 31 15 15 7 6 11 29 31 43 15 22 16 26 7 11 7 8 21 23 18 13 24 23 31 25 17 7 21 11 25 15 28 20 30 28 34 38 29 8 5 30 12 19 21 18 24 28 10 3 5 11 20 13 19 33 19 3 6 11 22 11 5 24 15 6 7 3 5 6 20 12 5 15 4 3 18 15 5 5 3 7 3 5 7 6 10 4 13 10 16 14 16 11 4 7 3 6 14 16 21 7 4 9 3 5 4 7 13 18 21 5 3 4 11 16 25 5 5 6 4 10 19 7 12 6 5 7 22 9 23 11 9 15 7 18 14 15 5 8 16 20 6 7 13 9 9 5 16 25 4 3 4 4 2 2 4 4 5 10 19 14 2 4 3 2 3 4 6 7 15 8 17 18 8 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_107578918_107579388
seq2: B6Ng01-219B15.b_45_515 (reverse)

seq1  CACAGGAGATCTTCTTAAATCAAACAAACCTTGCTTGGTTTCTCATCTAT  50
      |||||||||| |||||||||||||||| ||||||| || || ||||||||
seq2  CACAGGAGATATTCTTAAATCAAACAAGCCTTGCTAGGGTTGTCATCTAT  50

seq1  GAAAGGATAAAAATATGCCTTCTTACCATGAAACCTCATCTAAGAAAGCC  100
      ||||||||||||||||||||| || |||||||||||||||| ||||||||
seq2  GAAAGGATAAAAATATGCCTTTTTGCCATGAAACCTCATCTTAGAAAGCC  100

seq1  AGATTTCAAACAGCTCACCCAAATCTAGGACATTTAAAGTTCTCACAGCA  150
      || |||||||||| |||||||||| ||||||||||| |||||||||||||
seq2  AGTTTTCAAACAGTTCACCCAAATGTAGGACATTTAGAGTTCTCACAGCA  150

seq1  ACGGTCATTAAACATCTAATAACCTCTTATGCCCAAAGACCATTAGCTGA  200
      | ||||| |||| || ||||||||| ||| ||||||||||||||||||||
seq2  AAGGTCAATAAAAATGTAATAACCTGTTAAGCCCAAAGACCATTAGCTGA  200

seq1  AAACTCACTTGCATCCAACAAAGACAATCTGAACATGGGCTGTAGTTTTC  250
      ||| ||| |||||||||||||||||||| |||||||||||||||||||||
seq2  AAAATCAATTGCATCCAACAAAGACAATGTGAACATGGGCTGTAGTTTTC  250

seq1  ATTTTAAATGTGTTTTCTTACTTTTATTATCTGTAAACCACCATGAAATT  300
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  ATTTTAAATGTGTTTTCTTAATTTTAATATCTGTAAACCACCATGAAATT  300

seq1  CCACCAACTAGAACAAAAGGACCACAAGTTTAATTCAGATAGAGTATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAACTAGAACAAAAGGACCACAAGTTTAATTCAGATAGAGTATAAA  350

seq1  AAAATACACAAAAAAACAAACACACATACACACACACACACACACACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACACAAAAAAACAAACACACATACACACACACACACACACACACA  400

seq1  CACACCTTCCCAAAAGGGAACCCACCACCATTTGGGAGCAATGAACAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTCCCAAAAGGGAACCCACCACCATTTGGGAGCAATGAACAACA  450

seq1  TAAAGATGTGCTATTGAATTC  471
      |||||||||||||||||||||
seq2  TAAAGATGTGCTATTGAATTC  471

seq1: chr6_107424014_107425156
seq2: B6Ng01-219B15.g_68_1204

seq1  GAATTCCTGAGTATGTCTAAACTATAGGCAAAGAAAAACAGGGAAGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGTATGTCTAAACTATAGGCAAAGAAAAACAGGGAAGTATT  50

seq1  TCATTCATTCATCAATTCATCCATTCACCCATTCATTCACTCATTCACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATTCATCAATTCATCCATTCACCCATTCATTCACTCATTCACTC  100

seq1  ATTCACTCATCCAAAAACATTTCTTTATCGACAAGTATGCACTTGGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTCATCCAAAAACATTTCTTTATCGACAAGTATGCACTTGGCAGT  150

seq1  TGTTAAGCGCTGGTGATAAAAGCATGAAACAAATCCTGTTTCAATCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGCGCTGGTGATAAAAGCATGAAACAAATCCTGTTTCAATCTTCA  200

seq1  GTGAGCTCCCTGTCTAGTGTGAGACATTTCCACAGCTTGCTGTAAGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTCCCTGTCTAGTGTGAGACATTTCCACAGCTTGCTGTAAGAAAA  250

seq1  TATAAGCAGTGTAGAGACAGCTGAATGCATGGGTTGCAGCTGCTCCAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCAGTGTAGAGACAGCTGAATGCATGGGTTGCAGCTGCTCCAAGC  300

seq1  CAGCTGTTAGGAAGCTAGGGAGAGCTTCTGGAAGAACGAAATGACAGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTAGGAAGCTAGGGAGAGCTTCTGGAAGAACGAAATGACAGCTA  350

seq1  TTGCAACACCAGAGGAGAAAACCCTATCATGCATGTCCAGGGAAACAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACACCAGAGGAGAAAACCCTATCATGCATGTCCAGGGAAACAGTC  400

seq1  CTAGAGAAGGATGGCTTTTGTTCTGGAATCACAGACAGAGGTTAGGGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAAGGATGGCTTTTGTTCTGGAATCACAGACAGAGGTTAGGGATC  450

seq1  GGGGGAAGAAATAAAGCTTAAGTCTTTGGTGGGGTGCCTATGTGTAAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAGAAATAAAGCTTAAGTCTTTGGTGGGGTGCCTATGTGTAAGCA  500

seq1  GGTCCAACCCAGGTTTGCCTTTCTAAGCATTGTCTCTCTCTACTGTTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAACCCAGGTTTGCCTTTCTAAGCATTGTCTCTCTCTACTGTTGCA  550

seq1  TCCTTGAGAATGTTCAAGTTGTACTACCATGGAGATTTGATTTGTGGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAGAATGTTCAAGTTGTACTACCATGGAGATTTGATTTGTGGATT  600

seq1  TGGTAGTTGACTCCTACCTAGTCCACAGTACTAGCATCAAGGAAGAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTTGACTCCTACCTAGTCCACAGTACTAGCATCAAGGAAGAGGAA  650

seq1  AGAAACAACAAGGTATATTGCACCTCCTCTGTGTAGGCCATGATATAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAACAAGGTATATTGCACCTCCTCTGTGTAGGCCATGATATAAAG  700

seq1  TCAGAAGACACTTTTATTCACAAATAAATACATGATAAGGGAAGGATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGACACTTTTATTCACAAATAAATACATGATAAGGGAAGGATTCA  750

seq1  CCCTCTCCCAACAGGAATCTGATTAGCTTTTCAGCTAG-AAGGTGCCCTG  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCTCTCCCAACAGGAATCTGATTAGCTTTTCAGCTAGAAAGGTGCCCTG  800

seq1  CTGTCCAGAAAGGACCT-GGAGGAACACCTGTCCCACCACGTGCTT-GGG  847
      ||||||||||||||||| |||||||||||||||||||||||||||| |||
seq2  CTGTCCAGAAAGGACCTGGGAGGAACACCTGTCCCACCACGTGCTTGGGG  850

seq1  CCTGAAATACATTCTAAAGCTGAGTGTACCAGGCTGGTTTCCACAGCACC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAATACATTCTAAAGCTGAGTGTACCAGGCTGGTTTCCACAGCACC  900

seq1  AGGTAGGTCTGACTCCCTTCCCCTGG-TGGGAAACCTTCAGTCTCT-GAG  945
      ||||||||||||||||||| |||||| ||||||||||||||||||| |||
seq2  AGGTAGGTCTGACTCCCTTTCCCTGGTTGGGAAACCTTCAGTCTCTGGAG  950

seq1  CTCAAGATTTTCCCTT-GTTTTAAGGACACTCAACA-TTCTAGA-TTTTT  992
      |||||||||||||||| |||||||| |||||||||| ||||||| |||||
seq2  CTCAAGATTTTCCCTTGGTTTTAAGAACACTCAACATTTCTAGATTTTTT  1000

seq1  TCCCTCTTTTTAATGAAAACATTCCCTTCCGATTCCATTTTCTTATAGAA  1042
      |||||||||| |  ||||||||||||||| || |||||||   |||||||
seq2  TCCCTCTTTTAATGGAAAACATTCCCTTCGGA-TCCATTT--CTATAGAA  1047

seq1  TATTAGAAAACCCAGACTTCATTTCTCTTTATATCAAGAGCAATCTCTGA  1092
      || ||||||  |||||| ||| |||||||| |||||  ||| |||| |||
seq2  TA-TAGAAA--CCAGAC-TCA-TTCTCTTTTTATCAGAAGC-ATCT-TGA  1090

seq1  GCAATTCCCCTACTAGGAAGCCCTTCTCAGTGTGGGTCAGAATGCTGATC  1142
      |||||| |||||||||||||||||| |||||||||  |   |||||||||
seq2  GCAATT-CCCTACTAGGAAGCCCTT-TCAGTGTGGTCC--TATGCTGATC  1136

seq1  G  1143
      |
seq2  G  1137

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Alignment Information