BAC Information

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BAC

Clone NameB6Ng01-220D02
Chromosome6 (Build37)
Map Location 129,999,463 - 129,999,975
singlet/doubletsinglet
Overlap geneLOC100038894, LOC100038895, Klra4
Upstream geneKlrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893
Downstream geneLOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220D02.bB6Ng01-220D02.g
ACCGA035815GA035816
length5091,187
definitionB6Ng01-220D02.b B6Ng01-220D02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaggacagacagggtaagattaacccttaacacaaaaataacaacaaaat
aataaagattacatgtatttttaaattatattaaaagaacttaacatata
aatacctaggaaagttattaaaggatacacagcattatgaggtgatttcc
taaaatttgtatttgtaaaaagaaatagaccttcagcaaaacagctaaaa
acaaggtgttaatgcaaaagggctattttgaggatcaaggacaaatgtgg
ataagtattggaaaatagaggataggagaaaataaaggatgggctaaaaa
aaacttaaggctgtatagaaggtcctatggaaacccaagagttaaaaagc
ttatagttgaccaacacaaaacacattccatgtgttcttaatgattggag
ttttatgttttgttttgtttagtttgggttttctttaatgttgtttgtct
gtgtgtttctttgtttttttttggggggggcaatgtttttcttattagaa
ttttctttc
gaattccattggagggaaatggacacaatagcttgagtcaaattttgtcc
agcctacaagattcactcgaattaagatggagtagaaatggaaggaatgg
acaacaaatgactgctccaacttgatacccatttcttgggaaagactcaa
actataacaagattaatgatactctcctgtgctaacagactgagacctag
cacagctgtctcctgaatgaacagaagaagtcttcagccattcattcatc
tgatggaaacatatgtagagtccccactgtcaaatattgggcaaggctca
ggggatcttgtggagcagtgggggatagggtttagagaacctgagcgttc
aagggcaccacaggaagtcctacagaggcaactgacctgaacatatgagt
aaacacagaaactggaccaccaaccaaagtgtatgcaagggctgaatcta
ggatccctacacatttttaacagatgtacagcttggttttcatatgggta
ccctaagaatcagagaagaggcttgtgggactatgttaggcaatctattt
ttgttgaatggtgcttgctcgagtgaaccaatagaggaatctacaagtga
ctgaaaggtgatccatgttcccagaatcaagtgcctgtccatgattctat
gactatcagtcatgcaatgtcccaagcttctatcattctggctagactcc
acccccataattacctgaatatagccagatatacttctccccacagttag
ctggcaacagtaagatagcgcaacccactctaagaggggctgcttggcaa
ctcctcgctctctttagctctctcctttgttacactctagcccttcttct
ctctttcccttccctcttctctccacatggccatggccatggccatgggc
tagtctctctctttccactttctctcctttctccctgcctttctacataa
atctctaaacccatagacagtctctgctcatcaaggccagccaacccttg
agatggaataggctttcccctaatgagcagcatctacctcctgctaggag
ccaccctggtgaatcagccacaataaacctcctcacctggtgtgaactat
tcagtgccccctctctcccccatgtctccgtcatcaattcctgagacgat
atggccacctccaaaccactaattccgtggtttctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129999463_129999975
seq2: B6Ng01-220D02.b_46_559

seq1  GAATTCAAGGACAGACAGGGTAAGATTAACCCTTAACACAAAAATAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGACAGACAGGGTAAGATTAACCCTTAACACAAAAATAACAA  50

seq1  CAAAATAATAAAGATTACATGTATTTTTAAATTATATTAAAAGAACTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAATAAAGATTACATGTATTTTTAAATTATATTAAAAGAACTTAA  100

seq1  CATATAAATACCTAGGAAAGTTATTAAAGGATACACAGCATTATGAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAATACCTAGGAAAGTTATTAAAGGATACACAGCATTATGAGGTG  150

seq1  ATTTCCTAAAATTTGTATTTGTAAAAAGAAATAGACCTTCAGCAAAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTAAAATTTGTATTTGTAAAAAGAAATAGACCTTCAGCAAAACAG  200

seq1  CTAAAAACAAGGTGTTAATGCAAAAGGGCTATTTTGAGGATCAAGGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAACAAGGTGTTAATGCAAAAGGGCTATTTTGAGGATCAAGGACAA  250

seq1  ATGTGGATAAGTATTGGAAAATAGAGGATAGGAGAAAATAAAGGATGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGATAAGTATTGGAAAATAGAGGATAGGAGAAAATAAAGGATGGGC  300

seq1  TAAAAAAAACTTAAGGCTGTATAGAAGGTCCTATGGAAACCCAAGAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAACTTAAGGCTGTATAGAAGGTCCTATGGAAACCCAAGAGTTA  350

seq1  AAAAGCTTATAGTTGACCAACACAAAACACATTCCATGTGTTCTTAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTATAGTTGACCAACACAAAACACATTCCATGTGTTCTTAATGA  400

seq1  TTGGAGTTTTATGTTTTGTTTTGTTTAGTTTGGGTTTTCTTTAATGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTTTATGTTTTGTTTTGTTTAGTTTGGGTTTTCTTTAATGTTGT  450

seq1  TTGTCTGTGTGTTTCTTTGTTTTTTTTTGGGGGGGGCAATG-TTTTCTTA  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTGTCTGTGTGTTTCTTTGTTTTTTTTTGGGGGGGGCAATGTTTTTCTTA  500

seq1  TTAGAATTTTCTTT  513
      ||||||||||||||
seq2  TTAGAATTTTCTTT  514