BAC Information

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BAC

Clone NameB6Ng01-220E13
Chromosome6 (Build37)
Map Location 134,901,545 - 134,902,668
singlet/doubletsinglet
Overlap gene1190002F15Rik
Upstream geneEtv6, LOC100043660, Bcl2l14, Lrp6, Mansc1, Loh12cr1, LOC100043884, Dusp16, Crebl2, Gpr19, Cdkn1b
Downstream geneApold1, Ddx47, Gprc5a, Gprc5d, LOC100043668, Hebp1, 8430419L09Rik, Gsg1, Pbp2, LOC100043890, Emp1, Grin2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-220E13.bB6Ng01-220E13.g
ACCGA035883GA035884
length1,136453
definitionB6Ng01-220E13.b B6Ng01-220E13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttacagaaaagaaaaaaataaacttttatctggcttaagcca
ctactgtttctgggctctgttactagctgccaaatgcaaatcttaactga
tagaaaagtccttgacggagtttgagctggtgaatggatgctgcctgttc
agtggctctgcagtggtggatctgtgggagtggagcatcctggagggtac
caggagataaagatggcttggcagatgggggcagacagtgagaatacacc
tcacaaggtgtcacggactttcttttcccccaggacacctctgctgaagt
actgttatacagtggctctttaaacgtctattgatggagtaatttgaagt
ccgctcctgtcagctggcctcaaagctgggctatttagaagatgcgtact
ctttgtgcctaaaaaaaagagcagcaggtaaagaatggagcgggaagggg
tatcagcattacaggaaagtcaagtgactccctgcaggcgtctccaagga
aaggactttgttacacgtgattgtctaatgaaaatacatcaaagtctaat
gaagatatcctttactgagtagcaactgtaaataatgtcccagatgtaca
tccttctgtagcttatagcatgaattcatatactacctatttctaattta
ttattttcataataacttcatcatcgtaagattaggcaagactgttccat
tttacgttagaaggacatttactgtttatatggattataaaaatatgaac
agactccggttctagctcattctgtaatccaagtacttgtgagccagagg
cagaaagacagttgtgagtttaagggtcaggtgactgtgggtgacatagt
ccaggggaccagggggctgcagggttagactttcctctcaaaaaaaaaac
aaaaccaaaaaaaaccaaaaaccataaaaaagttcagttacacagcacaa
ctactaaaggcaacataaaagagagtagcttggtcccatgtaacgaagga
ttttaccattcttttttctatttgtgtaaggaactgtagttccagagctc
aagggagaacagctcatcaggcaaactgctttgccacaaaacctgacagc
ttgggggtgtgaatccctggaaactgaccctgagaa
ttctgaaaaacacatcttccagccggagggtggactaacacataacagta
aagggggagcacatccaagagcacagaggaaagctcgtccgtccacactc
ttgtgaagagttgaggaactgtttgtagtgacaatggaggaaaggagaac
cgtgaggctggggagatggctctgtcagtaaagcgttggtcacgcaagca
tgagcagttgagttcaatgcccacaacccatgctgggggctgggaggagg
gtaaggaaggagtggtggtggactatgattgcagttgtactgccagagag
gcaggtaggtgggtccctggggcgctctggccagccagcctagtgggtga
gctctaagccaataggagaccctgtctcaaaaataatctcagcaggtggc
ggtgtgcacaatgtatttgttttggtattggctgcacactctgatggcct
aag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_134901545_134902668
seq2: B6Ng01-220E13.b_46_1181

seq1  GAATTCTTTTACAGAAAAGAAAAAAATAAACTTTTATCTGGCTTAAGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACAGAAAAGAAAAAAATAAACTTTTATCTGGCTTAAGCCA  50

seq1  CTACTGTTTCTGGGCTCTGTTACTAGCTGCCAAATGCAAATCTTAACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTTCTGGGCTCTGTTACTAGCTGCCAAATGCAAATCTTAACTGA  100

seq1  TAGAAAAGTCCTTGACGGAGTTTGAGCTGGTGAATGGATGCTGCCTGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGTCCTTGACGGAGTTTGAGCTGGTGAATGGATGCTGCCTGTTC  150

seq1  AGTGGCTCTGCAGTGGTGGATCTGTGGGAGTGGAGCATCCTGGAGGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTCTGCAGTGGTGGATCTGTGGGAGTGGAGCATCCTGGAGGGTAC  200

seq1  CAGGAGATAAAGATGGCTTGGCAGATGGGGGCAGACAGTGAGAATACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATAAAGATGGCTTGGCAGATGGGGGCAGACAGTGAGAATACACC  250

seq1  TCACAAGGTGTCACGGACTTTCTTTTCCCCCAGGACACCTCTGCTGAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGGTGTCACGGACTTTCTTTTCCCCCAGGACACCTCTGCTGAAGT  300

seq1  ACTGTTATACAGTGGCTCTTTAAACGTCTATTGATGGAGTAATTTGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTATACAGTGGCTCTTTAAACGTCTATTGATGGAGTAATTTGAAGT  350

seq1  CCGCTCCTGTCAGCTGGCCTCAAAGCTGGGCTATTTAGAAGATGCGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTCCTGTCAGCTGGCCTCAAAGCTGGGCTATTTAGAAGATGCGTACT  400

seq1  CTTTGTGCCTAAAAAAAAGAGCAGCAGGTAAAGAATGGAGCGGGAAGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGCCTAAAAAAAAGAGCAGCAGGTAAAGAATGGAGCGGGAAGGGG  450

seq1  TATCAGCATTACAGGAAAGTCAAGTGACTCCCTGCAGGCGTCTCCAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCATTACAGGAAAGTCAAGTGACTCCCTGCAGGCGTCTCCAAGGA  500

seq1  AAGGACTTTGTTACACGTGATTGTCTAATGAAAATACATCAAAGTCTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTTTGTTACACGTGATTGTCTAATGAAAATACATCAAAGTCTAAT  550

seq1  GAAGATATCCTTTACTGAGTAGCAACTGTAAATAATGTCCCAGATGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATCCTTTACTGAGTAGCAACTGTAAATAATGTCCCAGATGTACA  600

seq1  TCCTTCTGTAGCTTATAGCATGAATTCATATACTACCTATTTCTAATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGTAGCTTATAGCATGAATTCATATACTACCTATTTCTAATTTA  650

seq1  TTATTTTCATAATAACTTCATCATCGTAAGATTAGGCAAGACTGTTCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCATAATAACTTCATCATCGTAAGATTAGGCAAGACTGTTCCAT  700

seq1  TTTACGTTAGAAGGACATTTACTGTTTATATGGATTATAAAAATATGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACGTTAGAAGGACATTTACTGTTTATATGGATTATAAAAATATGAAC  750

seq1  AGACTCCGGTTCTAGCTCATTCTGTAATCCAAGTACTTGTGAGCCAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCCGGTTCTAGCTCATTCTGTAATCCAAGTACTTGTGAGCCAGAGG  800

seq1  CAGAAAGACAGTTGTGAGTTTAA-GGTCAGGTGACTGTGGGTGACATAGT  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAGAAAGACAGTTGTGAGTTTAAGGGTCAGGTGACTGTGGGTGACATAGT  850

seq1  CCA-GGGACCAGGGGGCTGCAGGGTTAGACTTTCCTCTCAAAAAAAAAAC  898
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGACCAGGGGGCTGCAGGGTTAGACTTTCCTCTCAAAAAAAAAAC  900

seq1  AAAAAACAAAAAAAACCAAAAACCATAAAAAAGTTCAGTTACACAGCACA  948
       |||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAAACCAAAAAAAACCAAAAACCATAAAAAAGTTCAGTTACACAGCACA  949

seq1  ACTACTAAA-GCAACATAAAAGAGAGTAGCTTGGCCCCATGTAACGAAGG  997
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  ACTACTAAAGGCAACATAAAAGAGAGTAGCTTGGTCCCATGTAACGAAGG  999

seq1  ATTTTACCAT--CTTTTTCTA-TTGTGTAAGAAACTGTAAGTCCAGAG--  1042
      ||||||||||   |||||||| ||||||||| |||||||  |||||||  
seq2  ATTTTACCATTCTTTTTTCTATTTGTGTAAGGAACTGTAGTTCCAGAGCT  1049

seq1  CCAGGGAG-ACAGCTCATCAGGCAAAACTGC-TTGCCAC-AAACCTGACA  1089
      | |||||| |||||||||||||| ||||||| ||||||| ||||||||||
seq2  CAAGGGAGAACAGCTCATCAGGC-AAACTGCTTTGCCACAAAACCTGACA  1098

seq1  GCCTGGGTGTG---ATCCCTGG-AACTGACCCCTGAGAA  1124
      || |||| |||   |||||||| |||||| |||||||||
seq2  GCTTGGGGGTGTGAATCCCTGGAAACTGA-CCCTGAGAA  1136