MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-222L17
Chromosome	6 (Build37)
Map Location	99,608,358 - 99,723,001
singlet/doublet	doublet
Overlap gene	Eif4e3, Gpr27, Prok2, LOC384466
Upstream gene	LOC665963, LOC665979, Foxp1
Downstream gene	LOC626503, LOC100043703, Rybp, Shq1, LOC625221, BC049816
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC665963 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC665979 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Foxp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108655 MGI:1914004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Eif4e3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66892 MGI:1914142
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpr27 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14761 MGI:1202299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prok2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50501 MGI:1354178
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC384466 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384466
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC626503 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 41 ESTs, 7 Proteins pseudo : _no_value

name	LOC100043703 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 mRNAs, 2938 ESTs, 7 Proteins

name	Rybp (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56353 MGI:1929059
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Shq1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72171 MGI:1919421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC625221 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:625221
definition	note : ubiquitin-conjugating enzyme E2 variant 2 pseudogene pseudo : _no_value

name	BC049816 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232313 MGI:2682940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665963 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94378011 GeneID:665963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC665963 transcript_id : XM_980599.1

name	Foxp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716508 GeneID:108655 MGI:1914004
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box P1 transcript_id : NM_053202.1

name	Eif4e3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802909 GeneID:66892 MGI:1914142
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : eukaryotic translation initiation factor 4E member 3 transcript_id : NM_025829.3

name	Gpr27 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680072 GeneID:14761 MGI:1202299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 27 transcript_id : NM_008158.1

name	Prok2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82830394 GeneID:50501 MGI:1354178
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prokineticin 2 transcript_id : NM_001037539.1

name	Prok2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7656931 GeneID:50501 MGI:1354178
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prokineticin 2 transcript_id : NM_015768.1

name	LOC100043703 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255388 GeneID:100043703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 24 mRNAs, 2938 ESTs, 7 Proteins product : similar to tumor protein, translationally-controlled 1 transcript_id : XM_001480658.1

name	Rybp (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893368 GeneID:56353 MGI:1929059
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RING1 and YY1 binding protein transcript_id : NM_019743.3

name	Shq1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802471 GeneID:72171 MGI:1919421
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SHQ1 homolog (S. cerevisiae) transcript_id : NM_181590.3

name	BC049816 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130855 GeneID:232313 MGI:2682940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC049816 transcript_id : NM_198612.2

name	Foxp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716509 GeneID:108655 MGI:1914004
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016481 - negative regulation of transcription [Evidence IDA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : forkhead box P1 protein_id : NP_444432.1

name	Eif4e3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385302 CCDS:CCDS20386.1 GeneID:66892 MGI:1914142
definition	codon_start : 1 note : eukaryotic translation initiation factor-3 product : eukaryotic translation initiation factor 4E member 3 protein_id : NP_080105.1

name	Gpr27 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680073 CCDS:CCDS20387.1 GeneID:14761 MGI:1202299
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 27 protein_id : NP_032184.1

name	Prok2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82830395 CCDS:CCDS20388.1 GeneID:50501 MGI:1354178
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] GO_function : GO:0001664 - G-protein-coupled receptor binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0000187 - activation of MAPK activity [Evidence ISS]; GO:0001525 - angiogenesis [Evidence ISS]; GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0006935 - chemotaxis [Evidence ISS]; GO:0007623 - circadian rhythm [Evidence IDA]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence ISS]; GO:0006954 - inflammatory response [Evidence ISS]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0045987 - positive regulation of smooth muscle contraction [Evidence ISS]; GO:0048511 - rhythmic process [Evidence IEA]; GO:0019233 - sensory perception of pain [Evidence ISS]; GO:0007283 - spermatogenesis [Evidence ISS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; Bv 8 homolog (Bombina variegata); Bombina variegata 8 kD protein; Bombina variegata 8kDa protein; prokineticin 1 product : prokineticin 2 isoform 2 protein_id : NP_001032628.1

name	Prok2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7656932 CCDS:CCDS20389.1 GeneID:50501 MGI:1354178
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] GO_function : GO:0001664 - G-protein-coupled receptor binding [Evidence ISS]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0000187 - activation of MAPK activity [Evidence ISS]; GO:0001525 - angiogenesis [Evidence ISS]; GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0008283 - cell proliferation [Evidence ISS]; GO:0006935 - chemotaxis [Evidence ISS]; GO:0007623 - circadian rhythm [Evidence IDA]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence ISS]; GO:0006954 - inflammatory response [Evidence ISS]; GO:0007218 - neuropeptide signaling pathway [Evidence IEA]; GO:0045987 - positive regulation of smooth muscle contraction [Evidence ISS]; GO:0048511 - rhythmic process [Evidence IEA]; GO:0019233 - sensory perception of pain [Evidence ISS]; GO:0007283 - spermatogenesis [Evidence ISS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Bv 8 homolog (Bombina variegata); Bombina variegata 8 kD protein; Bombina variegata 8kDa protein; prokineticin 1 product : prokineticin 2 isoform 1 protein_id : NP_056583.1

name	LOC100043703 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255389 GeneID:100043703
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480708.1

name	Rybp (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348308 GeneID:56353 MGI:1929059
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003714 - transcription corepressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Ring1 interactor Rybp product : RING1 and YY1 binding protein protein_id : NP_062717.2

name	Shq1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31712010 GeneID:72171 MGI:1919421
definition	codon_start : 1 exception : mismatches in translation product : SHQ1 homolog protein_id : NP_853621.1

name	BC049816 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38348470 CCDS:CCDS20390.1 GeneID:232313 MGI:2682940
definition	GO_function : GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0016051 - carbohydrate biosynthesis [Evidence IEA] codon_start : 1 product : hypothetical protein LOC232313 protein_id : NP_941014.1

name	LOC665979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665979
definition	number : 2 pseudo : _no_value

name	LOC665979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665979
definition	number : 1 pseudo : _no_value

name	LOC384466 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384466
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:225217
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:179425
definition	standard_name : AW494214

name	(CDS detail)
type	STS
link
xref	UniSTS:47790
definition	standard_name : WI-17713

name	(CDS detail)
type	STS
link
xref	UniSTS:159547
definition	standard_name : AI461938

name	(CDS detail)
type	STS
link
xref	UniSTS:498377
definition	standard_name : Foxp1

name	(CDS detail)
type	STS
link
xref	UniSTS:130647
definition	standard_name : D6Mit103

name	(CDS detail)
type	STS
link
xref	UniSTS:161814
definition	standard_name : RH124992

name	(CDS detail)
type	STS
link
xref	UniSTS:159548
definition	standard_name : AI451927

name	(CDS detail)
type	STS
link
xref	UniSTS:494131
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:487638
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:493241
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:186501
definition	standard_name : Bv8-pending

name	(CDS detail)
type	STS
link
xref	UniSTS:144688
definition	standard_name : Trt

name	(CDS detail)
type	STS
link
xref	UniSTS:130691
definition	standard_name : D6Mit147

name	(CDS detail)
type	STS
link
xref	UniSTS:130692
definition	standard_name : D6Mit147.2

name	(CDS detail)
type	STS
link
xref	UniSTS:123055
definition	standard_name : 10.MMHAP89FLD1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:122728
definition	standard_name : 03.MMHAP15FLA3.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130933
definition	standard_name : D6Mit38

name	(CDS detail)
type	STS
link
xref	UniSTS:123958
definition	standard_name : 31.MMHAP7FRC10.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:60275
definition	standard_name : A001W26

name	(CDS detail)
type	STS
link
xref	UniSTS:123111
definition	standard_name : 12.MMHAP29FRD9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:159549
definition	standard_name : 13.MMHAP34FRE7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:122754
definition	standard_name : 03.MMHAP88FRA9.seq

name	LOC626503 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255387 GeneID:626503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 41 ESTs, 7 Proteins product : similar to ribosomal protein S8 pseudo : _no_value transcript_id : XR_034789.1

clone name	MSMg01-148K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114P10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-341D04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-426B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063M02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-222L17.b	B6Ng01-222L17.g
ACC	GA037668	GA037669
length	1,148	1,109
definition	B6Ng01-222L17.b	B6Ng01-222L17.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(99,608,358 - 99,609,514)	(99,721,917 - 99,723,001)
sequence	gaattctaagctccttctttagattgtgtctttaacaggataatacagaa tggatcctaagattctctttttaaaattggtgagaaattctcatttggag agtcaggaggatggtgggaatctagtaacactagaccaactgttctactc aaaccatttccaggcaccacgtgagtacaaaattttaatatttacaaacc acatttacccattaaaacagattcccgagacacttcacaagaacacactc tctccactgacttctcaaacgtctgagggagggcacgttgccctctttgt tttaggagaccctgtgggccagtgactgaagcgattacatgccttctgca cgtgtacatgccatgttccgcctccacttggcagataagatcactaaagc tgggttggtacaggaactcactaactgacacacagttggcagtggcagag ctgagactcgccacagttggctgacatcttctgtcaggggtggcccttga aggaacccaccccacatgcagcacagacccaaacgccacaccttgcaatc ctcaacctggccattccaggtgaacattctccatgcggtgcacctttaaa gacatggccaccgcaggcagaccttggagtcaattccacctaaacgatct tacccacggcaccacaacccagccacgtagatacctggggagacttccca caaagcagaagcggaggaaaggtttcccacactctacctgcacgttggtc acttaaagtgtcatcagtccacaggcagcagcccctgggagcttgttaga ggcaggttcagtccctaggtcccacacgtgttaagtccctggggtttcta atccttctcctagtcatgatgaccctgtatcatctgaataaaatcaccac aagggaaagccaacccctctatggtaagtccagtgaggaggagcatctaa gcaaatgtaaaagccactgttctaacagcgccctcaacgtcgcgcaaaga catcatcagcaacggcagtactgactgtgaaggtgttctgtccagggctt gacagagtttcagcaggcttcttttttattattctgcattaaaacactgt cttgtctgtctggcctgttccccacttcatgtgtggtgtgtgtgtgtg	gaattctatgtgacaacattgaaatagcttgagaacatgctaagtgaaac acatcagtttcaaacatccaaatattgcccacatttatttccatgaagaa aacaaaacagacaaattgataaatgcaaagaatagaatgtgtgttaccag gggctaggagaagctactgaggaattaacactgaacagtctcaagggcct cctcagaaaggtgactaagctctgaagatctgtagggttttgtagctata actgacagtgatagacttaaatacctgttcaggataacctcaagttgtat ttttataataaaatttaaaaatggtggggttggagagatgactcaggagt taagaacactgactgctcttccagaggacccggttcaattcccaagcatc cacatggtggttcacagccatctgttctaggggatctaatgccctcttct ggcatctgtgtgcatcgaacatgaacatggtgtatagacatacatgcaag caaaaatactaaaataatttatatgcagaaaataacccaattaaaataat gattacaagggaaatattttatgtgtacagttttttgatgtattgttgtc agggatggtacatgcatgtgccacagcacccacatggatgaagagacacc tcacaagagtcagttctctcctgtcactgtgcattctgggattgggtggc aagcacttttatccatagagcttgtcagccttgtctatccatatcttgtc agccttgatgtataaaattaatcacctcacaaaggtaccaaaaacataaa acctgaaaaaacacaatacagctattaagaatacttattattattaaata aaggataaaaattaattataggctgccttttccagggaactgtatgctag aataaccacaactggcctcatctaaaggaacgaagaatgccagtttacag agcaccaatggtatgatgaaagttgagcatttttattttgtaaaacccaa tgaaatattatttgatataacagagtagcagaagaatactcccataacac atgatctggagagaatgctcagcagtaagagcactgcctgctcttccaga gttctgagt
quality values	Open. Hide. 62 47 43 39 62 62 62 56 54 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 59 59 59 62 62 62 59 59 32 34 40 44 32 49 54 46 54 54 62 62 62 59 62 62 62 62 49 54 59 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 59 62 62 54 54 62 59 59 62 62 49 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 54 59 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 54 43 54 46 62 62 62 59 56 56 62 59 56 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 56 54 54 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 49 56 62 62 62 54 47 49 62 62 62 62 56 62 56 62 56 56 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 33 56 56 52 43 54 62 62 62 62 62 54 54 52 48 52 52 52 52 48 52 52 52 62 62 62 62 52 62 62 62 62 52 58 54 54 54 42 54 54 58 54 48 44 52 54 52 46 54 54 54 58 54 52 58 58 58 58 58 58 54 54 54 58 58 58 54 54 58 54 58 58 52 45 48 54 58 58 58 58 54 54 54 58 58 54 54 54 54 52 54 58 54 52 54 52 58 52 47 49 47 54 51 58 58 58 54 54 58 50 50 58 54 48 37 45 47 49 51 52 50 46 35 58 51 49 49 46 38 48 49 52 58 58 58 34 58 42 48 50 49 46 47 41 50 53 51 39 41 49 46 39 37 54 52 52 49 50 46 47 50 46 41 51 37 48 37 50 50 48 35 51 40 42 44 43 49 53 39 50 51 50 50 50 49 52 39 37 50 32 51 50 50 53 58 58 43 44 39 49 31 49 37 30 33 37 41 52 37 49 50 40 41 42 31 54 44 21 46 49 50 32 15 51 52 54 44 30 54 31 54 53 34 51 50 49 49 49 41 51 39 45 42 49 50 42 52 42 37 40 33 49 34 44 54 40 40 38 33 46 53 32 54 54 37 42 53 31 37 33 42 52 42 35 41 37 53 31 40 30 33 54 31 32 32 45 35 30 27 26 30 31 27 26 37 40 31 27 39 30 31 47 31 32 31 24 52 30 47 21 34 32 51 19 27 31 31 27 9 14 46 45 30 33 29 22 28 31 40 32 24 32 26 28 31 36 31 25 51 30 35 35 42 31 32 18 23 45 46 46 46 18 46 19 30 32 35 30 31 28 43 31 37 30 31 31 34 32 42 27 34 36 26 30 36 34 32 31 25 18 40 31 26 38 28 32 31 22 26 31 32 28 31 36 22 19 15 46 46 28 26 25 25 22 17 16 26 26 29 16 46 16 41 48 32 31 24 17 10 17 27 31 29 25 31 32 31 31 31 33 37 20 46 13 14 30 25 30 20 15 17 37 37 30 19 28 22 18 31 11 29 24 35 24 34 31 22 6 27 10 6 13 8 18 17 24 43 35 22 8 24 22 23 25 26 16 26 16 32 18 14 19 17 19 14 16 7 11 21 6 9 8 13 21 22 21 6 17 14 15 17 22 26 39 8 12 21 22 22 33 22 22 8 12 9 4 8 25 17 23 12 26 16 23 25 20 24 24 27 23 24 20 19 16 7 10 22 21 22 14 8 34 5 7 24 8 12 15 11 19 27 17 30 25 9 16 9 9 3 6 6 19 5 25 9 40 23 19 7 18 9 9 22 21 5 13 7 6 13 33 47 21 14 7 7 14 17 9 9 4 6 7 11 13 15 11 16 15 10 27 8 8 8 18 16 25 9 6 3 4 11 7 11 13 23 12 15 8 7 7 10 7 3 6 9 7 13 17 19 5 6 8 4 3 13 12 4 8 4 7 8 7 9 7 8 7 9 6 8 4 5 5 6 4 2	Open. Hide. 62 49 32 25 62 62 62 62 62 62 62 50 44 51 25 28 33 34 56 56 62 35 49 49 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 59 59 62 59 54 54 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 42 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 49 54 59 59 62 59 62 62 62 59 62 62 59 59 54 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 59 51 62 59 62 62 62 62 62 59 62 62 62 59 62 59 62 59 56 59 62 62 62 62 62 62 62 62 59 59 62 62 62 49 62 62 62 62 62 56 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 46 43 56 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 56 46 34 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 54 62 52 52 52 62 62 62 62 62 62 62 62 52 52 62 62 52 62 52 52 52 54 58 54 52 54 58 58 58 58 58 58 52 54 54 44 54 49 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 53 54 51 54 43 31 22 52 52 58 58 58 58 58 58 58 54 58 58 58 58 46 52 52 52 33 52 58 58 58 58 58 58 47 58 46 58 58 58 58 58 58 58 58 49 49 58 49 51 58 58 58 58 58 58 58 51 41 58 51 52 46 58 58 51 58 58 53 51 42 53 58 58 38 41 58 58 50 48 49 50 51 44 48 50 51 58 53 51 38 19 25 49 52 41 48 49 38 41 43 50 49 53 53 51 58 21 37 51 58 54 36 58 40 40 50 40 47 43 52 45 41 40 44 31 25 46 35 51 38 53 39 54 58 41 54 50 51 34 53 52 54 39 42 37 38 49 51 53 51 42 32 49 41 40 49 49 54 54 25 17 26 32 33 46 42 54 54 27 35 47 41 37 31 37 47 47 54 47 40 33 25 39 23 42 37 40 41 37 33 46 35 52 37 37 40 35 45 42 46 38 42 37 42 32 39 42 24 44 30 53 52 53 52 51 33 47 35 40 34 34 33 23 14 22 31 31 29 52 32 42 43 28 49 49 32 31 45 22 32 45 42 39 32 32 42 35 30 31 36 46 40 30 46 31 31 31 33 18 42 45 40 31 27 21 41 36 45 37 27 27 34 32 42 46 51 51 51 51 30 31 22 31 10 40 26 31 31 27 28 31 36 30 31 29 25 27 21 42 32 30 33 33 33 34 31 31 24 31 31 41 31 26 31 32 48 31 38 32 46 31 31 25 27 21 26 46 46 46 21 13 34 17 24 31 38 31 31 15 20 21 32 35 36 14 7 10 31 41 9 18 24 21 35 46 19 18 23 19 31 31 24 24 35 33 32 31 26 22 38 31 27 18 19 15 13 14 16 13 13 26 35 31 31 10 17 6 26 32 32 21 26 11 44 11 29 20 29 24 33 19 38 31 12 26 33 32 30 8 13 19 26 17 33 15 9 21 10 21 26 15 30 32 19 16 8 11 13 21 26 14 17 19 15 20 24 31 30 48 14 9 15 25 24 28 11 24 15 33 48 43 48 13 23 30 48 43 25 19 18 25 27 29 9 10 13 14 8 8 13 17 11 47 19 11 5 18 10 5 5 20 8 15 27 8 7 21 3 7 14 8 7 8 5 19 27 7 11 8 7 6 28 9 16 28 18 16 24 28 13 38 19 12 11 10 27 19 8 14 3 3 6 8 15 16 20 25 9 22 5 12 4 4 6 4 23 7 7 12 20 12 11 12 6 23 7 8 8 22 8 16 10 13 13 22 4 8 11 23 7 4 3 3 13 4 11 20 5 20 10 5 4 12 3 7 18 5 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_99608358_99609514
seq2: B6Ng01-222L17.b_48_1195

seq1  GAATTCTAAGCTCCTTCTTTAGATTGTGTCTTTAACAGGATAATACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGCTCCTTCTTTAGATTGTGTCTTTAACAGGATAATACAGAA  50

seq1  TGGATCCTAAGATTCTCTTTTTAAAATTGGTGAGAAATTCTCATTTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTAAGATTCTCTTTTTAAAATTGGTGAGAAATTCTCATTTGGAG  100

seq1  AGTCAGGAGGATGGTGGGAATCTAGTAACACTAGACCAACTGTTCTACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGAGGATGGTGGGAATCTAGTAACACTAGACCAACTGTTCTACTC  150

seq1  AAACCATTTCCAGGCACCACGTGAGTACAAAATTTTAATATTTACAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATTTCCAGGCACCACGTGAGTACAAAATTTTAATATTTACAAACC  200

seq1  ACATTTACCCATTAAAACAGATTCCCGAGACACTTCACAAGAACACACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTACCCATTAAAACAGATTCCCGAGACACTTCACAAGAACACACTC  250

seq1  TCTCCACTGACTTCTCAAACGTCTGAGGGAGGGCACGTTGCCCTCTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACTGACTTCTCAAACGTCTGAGGGAGGGCACGTTGCCCTCTTTGT  300

seq1  TTTAGGAGACCCTGTGGGCCAGTGACTGAAGCGATTACATGCCTTCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAGACCCTGTGGGCCAGTGACTGAAGCGATTACATGCCTTCTGCA  350

seq1  CGTGTACATGCCATGTTCCGCCTCCACTTGGCAGATAAGATCACTAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTACATGCCATGTTCCGCCTCCACTTGGCAGATAAGATCACTAAAGC  400

seq1  TGGGTTGGTACAGGAACTCACTAACTGACACACAGTTGGCAGTGGCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGGTACAGGAACTCACTAACTGACACACAGTTGGCAGTGGCAGAG  450

seq1  CTGAGACTCGCCACAGTTGGCTGACATCTTCTGTCAGGGGTGGCCCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACTCGCCACAGTTGGCTGACATCTTCTGTCAGGGGTGGCCCTTGA  500

seq1  AGGAACCCACCCCACATGCAGCACAGACCCAAACGCCACACCTTGCAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCCACCCCACATGCAGCACAGACCCAAACGCCACACCTTGCAATC  550

seq1  CTCAACCTGGCCATTCCAGGTGAACATTCTCCATGCGGTGCACCTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCTGGCCATTCCAGGTGAACATTCTCCATGCGGTGCACCTTTAAA  600

seq1  GACATGGCCACCGCAGGCAGACCTTGGAGTCAATTCCACCTAAACGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGCCACCGCAGGCAGACCTTGGAGTCAATTCCACCTAAACGATCT  650

seq1  TACCCACGGCACCACAACCCAGCCACGTAGATACCTGGGGAGACTTCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACGGCACCACAACCCAGCCACGTAGATACCTGGGGAGACTTCCCA  700

seq1  CAAAGCAGAAGCGGAGGAAAGGTTTCCCACACTCTACCTGCACGTTGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAGAAGCGGAGGAAAGGTTTCCCACACTCTACCTGCACGTTGGTC  750

seq1  ACTTAAAGTGTCATCAGTCCACAGGCAGCAGCCCCTGGGAGCTTGTTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAAAGTGTCATCAGTCCACAGGCAGCAGCCCCTGGGAGCTTGTTAGA  800

seq1  GGCAGGTTCAGTCCCTAGGTCCCACACGTGTTAAGTCCCTGGGGTTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTTCAGTCCCTAGGTCCCACACGTGTTAAGTCCCTGGGGTTTCTA  850

seq1  ATCCTTCTCCTAGTCATGATGACCCTGTATCATCTGAATAAAATCACCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCTCCTAGTCATGATGACCCTGTATCATCTGAATAAAATCACCAC  900

seq1  AA-GGAAAGCCAACCCCTCTATGGTAAAGTCCAGTGAGGAGGAGCATCTA  949
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGGGAAAGCCAACCCCTCTATGGT-AAGTCCAGTGAGGAGGAGCATCTA  949

seq1  AGCAAAATGTAAAAGCCACTGTTCTAACAGCGCCCTCAACGCCGCGCAAA  999
      ||| ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGC-AAATGTAAAAGCCACTGTTCTAACAGCGCCCTCAACGTCGCGCAAA  998

seq1  GACATCACCAAGGCAACGGCAGTACTGACTGTGAAGGGTGGTCCTGTCCA  1049
      ||||||| ||  |||||||||||||||||||||||||   || |||||||
seq2  GACATCATCA--GCAACGGCAGTACTGACTGTGAAGG--TGTTCTGTCCA  1044

seq1  GGGGCTTGGACAGGAGGTTTCAGGCAGGGCTC-TTTTTATTA-TCTGCAT  1097
       |||||| |||||   |||||| |||||  || ||||||||| |||||||
seq2  -GGGCTT-GACAG--AGTTTCA-GCAGGCTTCTTTTTTATTATTCTGCAT  1089

seq1  TAAAAACACTGTC-TGTCTGTCT-GCCTGTCCCCCCACTCCATGTGTGTG  1145
      | ||||||||||| ||||||||| ||||||  ||||||| |||||||| |
seq2  T-AAAACACTGTCTTGTCTGTCTGGCCTGT-TCCCCACTTCATGTGTG-G  1136

seq1  TGTGTGTATGTG  1157
      ||||||| ||||
seq2  TGTGTGTGTGTG  1148

seq1: chr6_99721917_99723001
seq2: B6Ng01-222L17.g_92_1175 (reverse)

seq1  ACTCAGGACCTCTGAAAGAGCAGCCAGTGCTCTTAACTGCTGAGCCATCT  50
      ||||| || ||||| |||||||| |||||||||| ||||||||||  |||
seq2  ACTCA-GAACTCTGGAAGAGCAGGCAGTGCTCTT-ACTGCTGAGCATTCT  48

seq1  CTCCAGATCCTTGTGTTATGGGAGTATTC-TCTGCTACTCTGTTAATATT  99
      |||||||| | |||||||||||||||||| |||||||||||||| ||| |
seq2  CTCCAGAT-CATGTGTTATGGGAGTATTCTTCTGCTACTCTGTT-ATA-T  95

seq1  CAAATTAATAATTTCATTGGGTTTTACAAAAT-AAAATGCTCAACTTTCA  148
      |||| |||| |||||||||||||||||||||| |||||||||||||||||
seq2  CAAA-TAAT-ATTTCATTGGGTTTTACAAAATAAAAATGCTCAACTTTCA  143

seq1  TCATACCATTGGTGCTCTGT-AACTGGCATTCTTCGTTCC-TTAGATG-G  195
      |||||||||||||||||||| ||||||||||||||||||| ||||||| |
seq2  TCATACCATTGGTGCTCTGTAAACTGGCATTCTTCGTTCCTTTAGATGAG  193

seq1  GCCAGTTGTGGTTATTCTAGCATACAGTTCCCTGG-AAAGGCAGCCTATA  244
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCCAGTTGTGGTTATTCTAGCATACAGTTCCCTGGAAAAGGCAGCCTATA  243

seq1  ATTAATTTTTATCCTTTATTTAATAATAATAAGTATTCTTAATAGCTGTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTTATCCTTTATTTAATAATAATAAGTATTCTTAATAGCTGTA  293

seq1  TTGTGTTTTTTCAGGTTTTATGTTTTTGGTACCTTTGTGAGGTGATTAAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTTTCAGGTTTTATGTTTTTGGTACCTTTGTGAGGTGATTAAT  343

seq1  TTTATACATCAAGGCTGACAAGATATGGATAGACAAGGCTGACAAGCTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACATCAAGGCTGACAAGATATGGATAGACAAGGCTGACAAGCTCT  393

seq1  ATGGATAAAAGTGCTTGCCACCCAATCCCAGAATGCACAGTGACAGGAGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATAAAAGTGCTTGCCACCCAATCCCAGAATGCACAGTGACAGGAGA  443

seq1  GAACTGACTCTTGTGAGGTGTCTCTTCATCCATGTGGGTGCTGTGGCACA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGACTCTTGTGAGGTGTCTCTTCATCCATGTGGGTGCTGTGGCACA  493

seq1  TGCATGTACCATCCCTGACAACAATACATCAAAAAACTGTACACATAAAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTACCATCCCTGACAACAATACATCAAAAAACTGTACACATAAAA  543

seq1  TATTTCCCTTGTAATCATTATTTTAATTGGGTTATTTTCTGCATATAAAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCCTTGTAATCATTATTTTAATTGGGTTATTTTCTGCATATAAAT  593

seq1  TATTTTAGTATTTTTGCTTGCATGTATGTCTATACACCATGTTCATGTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTATTTTTGCTTGCATGTATGTCTATACACCATGTTCATGTTC  643

seq1  GATGCACACAGATGCCAGAAGAGGGCATTAGATCCCCTAGAACAGATGGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACACAGATGCCAGAAGAGGGCATTAGATCCCCTAGAACAGATGGC  693

seq1  TGTGAACCACCATGTGGATGCTTGGGAATTGAACCGGGTCCTCTGGAAGA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACCACCATGTGGATGCTTGGGAATTGAACCGGGTCCTCTGGAAGA  743

seq1  GCAGTCAGTGTTCTTAACTCCTGAGTCATCTCTCCAACCCCACCATTTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAGTGTTCTTAACTCCTGAGTCATCTCTCCAACCCCACCATTTTT  793

seq1  AAATTTTATTATAAAAATACAACTTGAGGTTATCCTGAACAGGTATTTAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATTATAAAAATACAACTTGAGGTTATCCTGAACAGGTATTTAA  843

seq1  GTCTATCACTGTCAGTTATAGCTACAAAACCCTACAGATCTTCAGAGCTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCACTGTCAGTTATAGCTACAAAACCCTACAGATCTTCAGAGCTT  893

seq1  AGTCACCTTTCTGAGGAGGCCCTTGAGACTGTTCAGTGTTAATTCCTCAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCTTTCTGAGGAGGCCCTTGAGACTGTTCAGTGTTAATTCCTCAG  943

seq1  TAGCTTCTCCTAGCCCCTGGTAACACACATTCTATTCTTTGCATTTATCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTCCTAGCCCCTGGTAACACACATTCTATTCTTTGCATTTATCA  993

seq1  ATTTGTCTGTTTTGTTTTCTTCATGGAAATAAATGTGGGCAATATTTGGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTCTGTTTTGTTTTCTTCATGGAAATAAATGTGGGCAATATTTGGA  1043

seq1  TGTTTGAAACTGATGTGTTTCACTTAGCATGTTCTCAAGCT  1085
      |||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGAAACTGATGTGTTTCACTTAGCATGTTCTCAAGCT  1084

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Alignment Information