MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-222N06
Chromosome	6 (Build37)
Map Location	46,878,357 - 47,022,491
singlet/doublet	doublet
Overlap gene	Cntnap2, LOC622745
Upstream gene	Rbpsuh-rs3
Downstream gene	LOC100041064, LOC100041078, A930035D04Rik, Cul1, Ezh2, Rn4.5s, EG384379, Pdia4, LOC100041154, Zfp786, Zfp398, Zfp282, Zfp212, A230106D06Rik, AI894139, LOC623601, Zfp777, Zfp746
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cntnap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66797 MGI:1914047
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Rbpsuh-rs3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19667 MGI:96525
definition	gene_synonym : Igkrsbp-rs3 note : recombining binding protein suppressor of hairless (Drosophila), related sequence 3 pseudo : _no_value

name	LOC622745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 60 ESTs, 3 Proteins pseudo : _no_value

name	LOC100041064 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100041078 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	A930035D04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320946 MGI:2445106
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 1 Protein

name	Cul1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26965 MGI:1349658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ezh2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14056 MGI:107940
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rn4.5s (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19799 MGI:97946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG384379 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384379 MGI:3648986
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Pdia4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12304 MGI:104864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041154 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 574 ESTs, 5 Proteins

name	Zfp786 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330301 MGI:3026883
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp398 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:272347 MGI:1917856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Zfp282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101095 MGI:2141413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp212 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232784 MGI:2682609
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A230106D06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232785 MGI:3040704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 2 Proteins

name	AI894139 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101197 MGI:2141515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623601 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623601
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins pseudo : _no_value

name	Zfp777 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72306 MGI:1919556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp746 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69228 MGI:1916478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 84 ESTs

name	Cntnap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138537 GeneID:66797 MGI:1914047
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin associated protein-like 2 transcript_id : NM_001004357.1

name	LOC100041064 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255083 GeneID:100041064
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041064 transcript_id : XM_001475673.1

name	LOC100041078 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255085 GeneID:100041078
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041078 transcript_id : XM_001475698.1

name	Cntnap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27754111 GeneID:66797 MGI:1914047
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : contactin associated protein-like 2 transcript_id : NM_025771.2

name	A930035D04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377305 GeneID:320946 MGI:2445106
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 1 Protein product : RIKEN cDNA A930035D04 gene transcript_id : XM_887910.2

name	Cul1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328459 GeneID:26965 MGI:1349658
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cullin 1 transcript_id : NM_012042.3

name	Ezh2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679720 GeneID:14056 MGI:107940
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enhancer of zeste homolog 2 (Drosophila) transcript_id : NM_007971.1

name	Pdia4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198315 GeneID:12304 MGI:104864
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein disulfide isomerase associated 4 transcript_id : NM_009787.2

name	LOC100041154 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255135 GeneID:100041154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 574 ESTs, 5 Proteins product : similar to ribosomal protein L35a transcript_id : XM_001475769.1

name	Zfp786 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803345 GeneID:330301 MGI:3026883
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 786 transcript_id : NM_177882.3

name	Zfp398 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353529 GeneID:272347 MGI:1917856
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 398 transcript_id : NM_173034.2

name	Zfp398 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803216 GeneID:272347 MGI:1917856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 398 transcript_id : NM_027477.2

name	Zfp282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158688 GeneID:101095 MGI:2141413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 282 transcript_id : NM_146175.3

name	Zfp212 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704157 GeneID:232784 MGI:2682609
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Zinc finger protein 212 transcript_id : NM_145576.1

name	AI894139 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349487 GeneID:101197 MGI:2141515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI894139 transcript_id : NM_178898.3

name	Zfp777 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487042 GeneID:72306 MGI:1919556
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 777 transcript_id : NM_001081382.1

name	Zfp746 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255126 GeneID:69228 MGI:1916478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 84 ESTs product : zinc finger protein 746 transcript_id : XM_904306.3

name	Cntnap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138538 GeneID:66797 MGI:1914047
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform a is encoded by transcript variant 1 product : contactin associated protein-like 2 isoform a protein_id : NP_001004357.1

name	LOC100041064 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255084 GeneID:100041064
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475723.1

name	LOC100041078 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255086 GeneID:100041078
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475748.1

name	Cntnap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385240 CCDS:CCDS20094.1 GeneID:66797 MGI:1914047
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : contactin associated protein-like 2 isoform b protein_id : NP_080047.1

name	A930035D04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377306 GeneID:320946 MGI:2445106
definition	codon_start : 1 product : hypothetical protein LOC320946 protein_id : XP_893003.2

name	Cul1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7549752 CCDS:CCDS20095.1 GeneID:26965 MGI:1349658
definition	GO_component : GO:0019005 - SCF ubiquitin ligase complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IC] GO_process : GO:0006915 - apoptosis [Evidence IMP]; GO:0007049 - cell cycle [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : cullin 1 protein_id : NP_036172.1

name	Ezh2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679721 CCDS:CCDS20096.1 GeneID:14056 MGI:107940
definition	GO_component : GO:0035098 - ESC/E(Z) complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA]; GO:0045120 - pronucleus [Evidence IDA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0042054 - histone methyltransferase activity [Evidence IDA] [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0016571 - histone methylation [Evidence IDA]; GO:0051154 - negative regulation of striated muscle cell differentiation [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : enhancer of zeste homolog 2 protein_id : NP_031997.1

name	Pdia4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198316 CCDS:CCDS20097.1 GeneID:12304 MGI:104864
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0003756 - protein disulfide isomerase activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] codon_start : 1 note : endoplasmic reticulum protein 72; calcium binding protein, intestinal product : protein disulfide isomerase associated 4 protein_id : NP_033917.2

name	LOC100041154 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255136 GeneID:100041154
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475819.1

name	Zfp786 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244498 CCDS:CCDS20098.1 GeneID:330301 MGI:3026883
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : zinc finger protein 786 protein_id : NP_808550.1

name	Zfp398 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27819592 CCDS:CCDS20099.1 GeneID:272347 MGI:1917856
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : zinc finger protein 398 isoform 1 protein_id : NP_081753.1

name	Zfp398 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370556 GeneID:272347 MGI:1917856
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2 product : zinc finger protein 398 isoform 2 protein_id : NP_766622.1

name	Zfp282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158689 CCDS:CCDS20100.1 GeneID:101095 MGI:2141413
definition	GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger protein 282 protein_id : NP_666287.3

name	Zfp212 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704158 GeneID:232784 MGI:2682609
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Zinc finger protein C2H2-150 product : Zinc finger protein 212 protein_id : NP_663551.1

name	AI894139 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725750 CCDS:CCDS20101.1 GeneID:101197 MGI:2141515
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC101197 protein_id : NP_849229.1

name	Zfp777 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487043 GeneID:72306 MGI:1919556
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : zinc finger protein product : zinc finger protein 777 protein_id : NP_001074851.1

name	Zfp746 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255127 GeneID:69228 MGI:1916478
definition	codon_start : 1 product : zinc finger protein 746 protein_id : XP_909399.3

name	EG384379 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384379
definition	number : 2 pseudo : _no_value

name	EG384379 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384379
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:130899
definition	standard_name : D6Mit349

name	(CDS detail)
type	STS
link
xref	UniSTS:118832
definition	standard_name : D4Rat30

name	(CDS detail)
type	STS
link
xref	UniSTS:125802
definition	standard_name : X17459

name	(CDS detail)
type	STS
link
xref	UniSTS:465468
definition	standard_name : Rbpj

name	(CDS detail)
type	STS
link
xref	UniSTS:166228
definition	standard_name : Rbpsuh-rs3

name	(CDS detail)
type	STS
link
xref	UniSTS:144333
definition	standard_name : Rbpsuh

name	(CDS detail)
type	STS
link
xref	UniSTS:224557
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130820
definition	standard_name : D6Mit273

name	(CDS detail)
type	STS
link
xref	UniSTS:116321
definition	standard_name : D6Mit224

name	(CDS detail)
type	STS
link
xref	UniSTS:130977
definition	standard_name : D6Mit75

name	(CDS detail)
type	STS
link
xref	UniSTS:126948
definition	standard_name : D13Mit121.2

name	(CDS detail)
type	STS
link
xref	UniSTS:126948
definition	standard_name : D13Mit121.2

name	(CDS detail)
type	STS
link
xref	UniSTS:219603
definition	standard_name : RH137515

name	(CDS detail)
type	STS
link
xref	UniSTS:479290
definition	standard_name : Tarbp2

name	(CDS detail)
type	STS
link
xref	UniSTS:125102
definition	standard_name : MHAa27b4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130903
definition	standard_name : D6Mit352

name	(CDS detail)
type	STS
link
xref	UniSTS:207945
definition	standard_name : AW743318

name	(CDS detail)
type	STS
link
xref	UniSTS:125771
definition	standard_name : U52951

name	(CDS detail)
type	STS
link
xref	UniSTS:143053
definition	standard_name : Ezh2

name	(CDS detail)
type	STS
link
xref	UniSTS:207946
definition	standard_name : AW554728

name	(CDS detail)
type	STS
link
xref	UniSTS:143054
definition	standard_name : Ezh2

name	(CDS detail)
type	STS
link
xref	UniSTS:273577
definition	standard_name : PMC87093P1

name	(CDS detail)
type	STS
link
xref	UniSTS:130902
definition	standard_name : D6Mit351

name	(CDS detail)
type	STS
link
xref	UniSTS:162684
definition	standard_name : RH125972

name	(CDS detail)
type	STS
link
xref	UniSTS:130868
definition	standard_name : D6Mit315

name	(CDS detail)
type	STS
link
xref	UniSTS:159497
definition	standard_name : AI987846

name	(CDS detail)
type	STS
link
xref	UniSTS:207947
definition	standard_name : BE335567

name	(CDS detail)
type	STS
link
xref	UniSTS:235433
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:235432
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:224892
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:159498
definition	standard_name : AI449432

name	(CDS detail)
type	STS
link
xref	UniSTS:207948
definition	standard_name : RH127077

name	(CDS detail)
type	STS
link
xref	UniSTS:250442
definition	standard_name : AI178375

name	(CDS detail)
type	STS
link
xref	UniSTS:123800
definition	standard_name : 27.MMHAP70FRA12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:179369
definition	standard_name : AI894139

name	(CDS detail)
type	STS
link
xref	UniSTS:261126
definition	standard_name : AA859256

name	(CDS detail)
type	STS
link
xref	UniSTS:210166
definition	standard_name : RH136171

name	LOC622745 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255082 GeneID:622745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 60 ESTs, 3 Proteins product : similar to cyclin I pseudo : _no_value transcript_id : XR_032364.1

name	Rn4.5s (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:84872130 GeneID:19799 MGI:97946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 4.5S RNA transcript_id : NR_002841.1

name	A230106D06Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255124 GeneID:232785 MGI:3040704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 2 Proteins product : RIKEN cDNA A230106D06 gene transcript_id : XR_031849.1

name	LOC623601 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255125 GeneID:623601
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_031857.1

clone name	MSMg01-369K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-185C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134A06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-265G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345K04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-134C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185A13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-358G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-361P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393C10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-132K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-136D24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-423I10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-470E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319J15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378E23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-304B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397O08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-542G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-450H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337B05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I05
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-222N06.b	B6Ng01-222N06.g
ACC	GA037738	GA037739
length	1,139	1,135
definition	B6Ng01-222N06.b	B6Ng01-222N06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(46,878,357 - 46,879,497)	(47,021,356 - 47,022,491)
sequence	gaattcaaatatatgagctcatgggagcccttctcacacaaaccatcaca actctggggtttttgcatttatatgggtctttcctgaatcagcttttcct ccataacaaactttctaatctcaaatttacatgaactcatgagcactctc gtagccagaatctttatgacacaacctgctgtttctttgccattatgatg aactttaatgtcttacttcgaggtcagtaaaaaaaaaaattacttaatta tcatgcagtttgttaagctctaggcctaacacccagtgtcccatctctta taaaatcaaggttgatgtataaatataattttatgacttaaaaatgttag gaaatgaataaaataaaagttagtatatcctcaaaggtctaaaaatcatt ataattcatgtaaagatttaatgttggaactttgctgccaaagcctttcc atatctttgtattagctatgaaatataatatagttatatttattagctat gacatataatataggtcatatagcataatctccatgtcaactcatagtct gatggctgaacccatccttccagacctaccaactgctttactgcaaaccc actgccaattgctctgacagtcctcaatgcactgggcacatttcatgcat atgactctctcctaactttcctctgtaagttgaaattctcctccagttca agaatcttggatacctcttcaatgtgttcctttgcctcccaacatcccag tagaatccattctttcttcttcattaaagtatccattgtgacttattcat tcttttattagagaactttctcactataatgctttctttggtatatctgc ctctttctctcccaaaatggtgaaattctacaagatggcataggtcatgt cataggaaacacgggtgtttagcatattcttccacatgcttgataaccat taaatgtatcttgacttatataagaccttttagaatattccatgatttca tttgtgcccaaaataacctcattaggtaggataaataagcatttttgatt ggttctattagaacaaaataagtagggcatataatgttattccaaaaaga cgagtccaagaaacatattgatggtaatgagtgactgat	gaattctcttatttaaggactagagaagaaaggcatcccaagtccaggtc agggaaaatgaatttgcctttcttctggttctacttgagccctgagatga ctggagctttctcacatgcagggacattttccctcataaatcagactcag tgccattcactggacactctctggacacagtcctactagttgtctgggga tcctttagtataattgagacttaacagtcatatttttggtatcaaatgat agtggcattttcatttcagcattttggaagcctgcctgaagatgttgtat tcacatctatgatgtcatacagtatccccaccatgggttgctcttttccc tgtgccactaaaggatctcccagatgcaggagttggtggagtagatatct ttcttagagaatttttagatatctcatttaaacttcatttttctgaggta ctcaggtcttctcacttctcagccttcaaggaggatagaaataccaactc aacttgcctgcctctccctcagctaagagggacagcctgcttttgtttac caagtgtgctagtcctccttttgcatggtggctctcttaagtgttgctgt cttctcttatgccctttgttcagagccacttgaatcttaaaaaaaatcat tttctagtcattttaggagggaaaagaggagtcagattgactatgcatac tacaactgggacctctacaggcgtaatgagtgatatagctcctcagagaa aggtcatcaaataacataaatgggcaacttacaaagagtaaaattgaaat gatttcaaataataaggatagtgaaatagttcagttttacagtcattggt tattttaaggcaaaattgaaatggtcattcctttcttcacttggggatag aaagataacacttggagatttaaagcattcattttagtttacctttcaaa aggcattaataattattgaatatatgtaaactgtctaaattatgatgcta tctaattttttccttaatcctgtcatttaaccagcagagagtttgaagaa cagaagaaaaatggcaggatgattatgtcaccagttgctgtgttcttagg tccaatcattcattgtacaaacaaataatacattc
quality values	Open. 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Alignment Information

BAC End 1

BAC End 2

seq1: chr6_46878357_46879497
seq2: B6Ng01-222N06.b_44_1182

seq1  GAATTCAAATATATGAGCTCATGGGAGCCCTTCTCACACAAACCATCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATATGAGCTCATGGGAGCCCTTCTCACACAAACCATCACA  50

seq1  ACTCTGGGGTTTTTGCATTTATATGGGTCTTTCCTGAATCAGCTTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGGGTTTTTGCATTTATATGGGTCTTTCCTGAATCAGCTTTTCCT  100

seq1  CCATAACAAACTTTCTAATCTCAAATTTACATGAACTCATGAGCACTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACAAACTTTCTAATCTCAAATTTACATGAACTCATGAGCACTCTC  150

seq1  GTAGCCAGAATCTTTATGACACAACCTGCTGTTTCTTTGCCATTATGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCAGAATCTTTATGACACAACCTGCTGTTTCTTTGCCATTATGATG  200

seq1  AACTTTAATGTCTTACTTCGAGGTCAGTAAAAAAAAAAATTACTTAATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAATGTCTTACTTCGAGGTCAGTAAAAAAAAAAATTACTTAATTA  250

seq1  TCATGCAGTTTGTTAAGCTCTAGGCCTAACACCCAGTGTCCCATCTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCAGTTTGTTAAGCTCTAGGCCTAACACCCAGTGTCCCATCTCTTA  300

seq1  TAAAATCAAGGTTGATGTATAAATATAATTTTATGACTTAAAAATGTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAAGGTTGATGTATAAATATAATTTTATGACTTAAAAATGTTAG  350

seq1  GAAATGAATAAAATAAAAGTTAGTATATCCTCAAAGGTCTAAAAATCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAATAAAATAAAAGTTAGTATATCCTCAAAGGTCTAAAAATCATT  400

seq1  ATAATTCATGTAAAGATTTAATGTTGGAACTTTGCTGCCAAAGCCTTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCATGTAAAGATTTAATGTTGGAACTTTGCTGCCAAAGCCTTTCC  450

seq1  ATATCTTTGTATTAGCTATGAAATATAATATAGTTATATTTATTAGCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTGTATTAGCTATGAAATATAATATAGTTATATTTATTAGCTAT  500

seq1  GACATATAATATAGGTCATATAGCATAATCTCCATGTCAACTCATAGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATAATATAGGTCATATAGCATAATCTCCATGTCAACTCATAGTCT  550

seq1  GATGGCTGAACCCATCCTTCCAGACCTACCAACTGCTTTACTGCAAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTGAACCCATCCTTCCAGACCTACCAACTGCTTTACTGCAAACCC  600

seq1  ACTGCCAATTGCTCTGACAGTCCTCAATGCACTGGGCACATTTCATGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAATTGCTCTGACAGTCCTCAATGCACTGGGCACATTTCATGCAT  650

seq1  ATGACTCTCTCCTAACTTTCCTCTGTAAGTTGAAATTCTCCTCCAGTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCTCTCCTAACTTTCCTCTGTAAGTTGAAATTCTCCTCCAGTTCA  700

seq1  AGAATCTTGGATACCTCTTCAATGTGTTCCTTTGCCTCCCAACATCCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTTGGATACCTCTTCAATGTGTTCCTTTGCCTCCCAACATCCCAG  750

seq1  TAGAATCCATTCTTTCTTCTTCATTAAAGTATCCATTGTGACTTATTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCCATTCTTTCTTCTTCATTAAAGTATCCATTGTGACTTATTCAT  800

seq1  TCTTTTATTAGAGAACTTTCTCACTATAATGCTTTCTTTGGTATATCTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTAGAGAACTTTCTCACTATAATGCTTTCTTTGGTATATCTGC  850

seq1  CTCTTTCTCTCCCAAAATGGTGAAATTCTACAAGATGGCATAGGTCATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTCTCCCAAAATGGTGAAATTCTACAAGATGGCATAGGTCATGT  900

seq1  CATAGGAAACACGGGTGTTTAGCATATTCTTCCACATGCTTGATAACCAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAAACACGGGTGTTTAGCATATTCTTCCACATGCTTGATAACCAT  950

seq1  TAAATGTATCTTGACTTATATAAGACC-TTTAGAATATTTCCATGATTTC  999
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  TAAATGTATCTTGACTTATATAAGACCTTTTAGAATA-TTCCATGATTTC  999

seq1  ATTTGTGCCCAAAATAACCTCATTAGGTAGGATAAATAAGCATTTTTGAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGCCCAAAATAACCTCATTAGGTAGGATAAATAAGCATTTTTGAT  1049

seq1  TGGTTCTATTAGAACAAATAAAGTAAGGGCATAATTATGTTA-TCCAAAA  1098
      ||||||||||||||||||  |||| ||||||| || |||||| |||||||
seq2  TGGTTCTATTAGAACAAAATAAGT-AGGGCAT-ATAATGTTATTCCAAAA  1097

seq1  AGACAGAGCCAAAAGAACATATTGATGGTAGATGAGTGA-TGAT  1141
      |||| ||| | ||  ||||||||||||||| |||||||| ||||
seq2  AGAC-GAGTCCAAGAAACATATTGATGGTA-ATGAGTGACTGAT  1139

seq1: chr6_47021356_47022491
seq2: B6Ng01-222N06.g_66_1200 (reverse)

seq1  GAATGTATTA-TTGTTTGTAC-ATGAATGGAATTGGA-CTTAGAACACAG  47
      |||||||||| |||||||||| |||||||  |||||| || |||||||||
seq2  GAATGTATTATTTGTTTGTACAATGAATG--ATTGGACCTAAGAACACAG  48

seq1  CAAACTGTGGACATAATCATCCCTGCC-TTTTTCTTCTGGTCTTCAAACT  96
      | |||||  ||||||||||| |||||| ||||||||||| ||||||||||
seq2  C-AACTGGTGACATAATCAT-CCTGCCATTTTTCTTCTGTTCTTCAAACT  96

seq1  CTCTGCTGGTTAAATGACAGGATTAAGGAAAAAATAAGATAGCATCATAA  146
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTCTGCTGGTTAAATGACAGGATTAAGGAAAAAATTAGATAGCATCATAA  146

seq1  TTTAGACAGTTTACATAATATTCAATAATTATTAATGCCTTTTGAAAGGT  196
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTAGACAGTTTACAT-ATATTCAATAATTATTAATGCCTTTTGAAAGGT  195

seq1  AAACTAAAATGAATGCTTTAAATCTCCAAGTGTTATCTTTCTATCCCCAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAATGAATGCTTTAAATCTCCAAGTGTTATCTTTCTATCCCCAA  245

seq1  GTGAAGAAAGGAATGACCATTTCAATTTTGCCTTAAAATAACCAATGACT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGAAAGGAATGACCATTTCAATTTTGCCTTAAAATAACCAATGACT  295

seq1  GTAAAACTGAACTATTTCACTATCCTTATTATTTGAAATCATTTCAATTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAACTGAACTATTTCACTATCCTTATTATTTGAAATCATTTCAATTT  345

seq1  TACTCTTTGTAAGTTGCCCATTTATGTTATTTGATGACCTTTCTCTGAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTTGTAAGTTGCCCATTTATGTTATTTGATGACCTTTCTCTGAGG  395

seq1  AGCTATATCACTCATTACGCCTGTAGAGGTCCCAGTTGTAGTATGCATAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATATCACTCATTACGCCTGTAGAGGTCCCAGTTGTAGTATGCATAG  445

seq1  TCAATCTGACTCCTCTTTTCCCTCCTAAAATGACTAGAAAATGATTTTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTGACTCCTCTTTTCCCTCCTAAAATGACTAGAAAATGATTTTTT  495

seq1  TTAAGATTCAAGTGGCTCTGAACAAAGGGCATAAGAGAAGACAGCAACAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATTCAAGTGGCTCTGAACAAAGGGCATAAGAGAAGACAGCAACAC  545

seq1  TTAAGAGAGCCACCATGCAAAAGGAGGACTAGCACACTTGGTAAACAAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGAGCCACCATGCAAAAGGAGGACTAGCACACTTGGTAAACAAAA  595

seq1  GCAGGCTGTCCCTCTTAGCTGAGGGAGAGGCAGGCAAGTTGAGTTGGTAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGTCCCTCTTAGCTGAGGGAGAGGCAGGCAAGTTGAGTTGGTAT  645

seq1  TTCTATCCTCCTTGAAGGCTGAGAAGTGAGAAGACCTGAGTACCTCAGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCTCCTTGAAGGCTGAGAAGTGAGAAGACCTGAGTACCTCAGAA  695

seq1  AAATGAAGTTTAAATGAGATATCTAAAAATTCTCTAAGAAAGATATCTAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGTTTAAATGAGATATCTAAAAATTCTCTAAGAAAGATATCTAC  745

seq1  TCCACCAACTCCTGCATCTGGGAGATCCTTTAGTGGCACAGGGAAAAGAG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCAACTCCTGCATCTGGGAGATCCTTTAGTGGCACAGGGAAAAGAG  795

seq1  CAACCCATGGTGGGGATACTGTATGACATCATAGATGTGAATACAACATC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCATGGTGGGGATACTGTATGACATCATAGATGTGAATACAACATC  845

seq1  TTCAGGCAGGCTTCCAAAATGCTGAAATGAAAATGCCACTATCATTTGAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGCAGGCTTCCAAAATGCTGAAATGAAAATGCCACTATCATTTGAT  895

seq1  ACCAAAAATATGACTGTTAAGTCTCAATTATACTAAAGGATCCCCAGACA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAATATGACTGTTAAGTCTCAATTATACTAAAGGATCCCCAGACA  945

seq1  ACTAGTAGGACTGTGTCCAGAGAGTGTCCAGTGAATGGCACTGAGTCTGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTAGGACTGTGTCCAGAGAGTGTCCAGTGAATGGCACTGAGTCTGA  995

seq1  TTTATGAGGGAAAATGTCCCTGCATGTGAGAAAGCTCCAGTCATCTCAGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAGGGAAAATGTCCCTGCATGTGAGAAAGCTCCAGTCATCTCAGG  1045

seq1  GCTCAAGTAGAACCAGAAGAAAGGCAAATTCATTTTCCCTGACCTGGACT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGTAGAACCAGAAGAAAGGCAAATTCATTTTCCCTGACCTGGACT  1095

seq1  TGGGATGCCTTTCTTCTCTAGTCCTTAAATAAGAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGCCTTTCTTCTCTAGTCCTTAAATAAGAGAATTC  1135

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information