BAC Information

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BAC

Clone NameB6Ng01-226N06
Chromosome6 (Build37)
Map Location 65,163,353 - 65,163,921
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid2, Atoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858
Downstream geneLOC634745, EG667141, C130060K24Rik, 9030611K07Rik, A930038C07Rik, LOC667160, Prdm5, 4930544G11Rik, Ppia-ps6_651.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226N06.bB6Ng01-226N06.g
ACCGA040656GA040657
length5631,197
definitionB6Ng01-226N06.b B6Ng01-226N06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tgtttagataggtaccttattttcaaaactggattatttggttaattgat
acttacttccttgagttctttgtgaataatagtaattataatgattatta
attcaaattttttattgtgttaaatgaattctcaaagtgtgctgacaacc
taagattttgtttttggagctgggtaacacagggcttagcaatcagcctg
ctgagaattcaggctcatagatgccattcaaaactgttcagatagctttg
tttttgagtgttgtgccttgctgaattgcaggcactgaattttaaacagg
ttcagtatcatttccttcaaggattaactcatccttttaggcttgagaaa
caagtactggccatcaccatctgaacattgtagatctacttgtcaggcag
gaaacttcagattccaaccagagactcattctcctgaataatgatggtga
cgagggagggaaacaagtgtgcccagaccttattataagctaggtaacaa
tgatagcactgcactggacgacttcatgggtagaaagaaaggtgtatttg
gaggggggtgagg
gaattctcacctgaggaataccgaatggccgagaagcacttgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctgacgaggatgtggagaatgaggaacactcctccattgttggtg
gaactgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggactaatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcatcagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagcgaggtaacccaatcacaaa
agaactcaaatggtatatactcactgataagtggatattagcccagaaac
ttagtataccggagatataagagacaatttgtaaaacacatgaaactgac
gaagaacgaagaccaaagtgtggacactttgccccttcttagaattgaga
acaaaacactcatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatctagagactgccatacccagggatccatcccataat
cagcctccaaacactgacaccattgcatacactagcaagattttgctgaa
aggactctgatatagctgtctcttgtgaggctatgcccggggcctggcaa
acacagaagtggatgctcacagtcagcttattgggatggtcacacgcccc
caatggaggagctagaagaagtacccacggagctaaaggggtctgcaacc
ctataggtggacacatattgaactaaccagtacacccgaagctcttgtct
tctagctgcataatgttatcagagttgattcattcttgatcttcctgtac
tagggtcaagtcttagggtgatcagtaacttccacttaaacctgaacctg
caacgtatcaagagcaacgtggggaaagctgtgaaagtatgtggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_65163353_65163921
seq2: B6Ng01-226N06.b_45_613

seq1  GAATTCTGTTTAGATAGGTACCTTATTTTCAAAACTGGATTATTTGGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTAGATAGGTACCTTATTTTCAAAACTGGATTATTTGGTTA  50

seq1  ATTGATACTTACTTCCTTGAGTTCTTTGTGAATAATAGTAATTATAATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATACTTACTTCCTTGAGTTCTTTGTGAATAATAGTAATTATAATGA  100

seq1  TTATTAATTCAAATTTTTTATTGTGTTAAATGAATTCTCAAAGTGTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATTCAAATTTTTTATTGTGTTAAATGAATTCTCAAAGTGTGCTG  150

seq1  ACAACCTAAGATTTTGTTTTTGGAGCTGGGTAACACAGGGCTTAGCAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCTAAGATTTTGTTTTTGGAGCTGGGTAACACAGGGCTTAGCAATC  200

seq1  AGCCTGCTGAGAATTCAGGCTCATAGATGCCATTCAAAACTGTTCAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTGAGAATTCAGGCTCATAGATGCCATTCAAAACTGTTCAGATA  250

seq1  GCTTTGTTTTTGAGTGTTGTGCCTTGCTGAATTGCAGGCACTGAATTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTTTTGAGTGTTGTGCCTTGCTGAATTGCAGGCACTGAATTTTA  300

seq1  AACAGGTTCAGTATCATTTCCTTCAAGGATTAACTCATCCTTTTAGGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTTCAGTATCATTTCCTTCAAGGATTAACTCATCCTTTTAGGCTT  350

seq1  GAGAAACAAGTACTGGCCATCACCATCTGAACATTGTAGATCTACTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAAGTACTGGCCATCACCATCTGAACATTGTAGATCTACTTGTC  400

seq1  AGGCAGGAAACTTCAGATTCCAACCAGAGACTCATTCTCCTGAATAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAAACTTCAGATTCCAACCAGAGACTCATTCTCCTGAATAATGA  450

seq1  TGGTGACGAGGGAGGGAAACAAGTGTGCCCAGACCTTATTATAAGCTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACGAGGGAGGGAAACAAGTGTGCCCAGACCTTATTATAAGCTAGG  500

seq1  TAACAATGATAGCACTGCACTGGACGACTTCATGGGTAGAAAGAAAGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATGATAGCACTGCACTGGACGACTTCATGGGTAGAAAGAAAGGTG  550

seq1  TATTTGGAGGGGGGTGAGG  569
      |||||||||||||||||||
seq2  TATTTGGAGGGGGGTGAGG  569