BAC Information

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BAC

Clone NameB6Ng01-230P16
Chromosome6 (Build37)
Map Location 35,069,212 - 35,070,288
singlet/doubletsinglet
Overlap geneCnot4
Upstream geneLrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik
Downstream geneNup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230P16.bB6Ng01-230P16.g
ACCGA043701GA043702
length1,0861,179
definitionB6Ng01-230P16.b B6Ng01-230P16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggaatcagggagtaatagaaaacaaaattaaatggataaga
tagaagatgattaccaagttttgaactaaggcagcagtatgtacttatgg
ttgatagaaggaatcactactctgttgatggaagttttaagtcaggagtg
tgtaaaatattcagtggaaagttttttttttttttttttactttctctaa
ttctggatattgagcgaagggtctcacgcatgctaggcaagtattttaac
accgagctacactcccagtcctacaagaccattctgagtgtccttgtggc
acacagtaagccctcaatttatatcagataaatgagctttaagagagact
gagggccggtaaggtggcgcaggcttgttatataagcgctgacgaggctt
gggcagaagggggagaaattaatgttctatgggttactcccatgagagaa
atcagagatctgaaatcggaagacccagaatagagaaccggggtagtttc
agaaggaaggaggttagcataatccaatactattcaaggagagtgaggct
ccagaaggactcctttgatttggtaacacagtgaccacagatcattggac
acttgagcagactgggatggagagttagatctaattgtcgggaagttaag
gaggtagtaatggagaccaactgtggaaaaggtactcagttaagaaaatg
gtaagaaagcaacttagaaaagtactcctagctctatatacctgaacagt
ttctattttttgaagaagagaatgggaagcagtttgtactgaatgttctt
aggtttcttagtacagaagtgttcagtacacatgctggtccagtgccctg
cttcttggtaattatgtgatcttggggaaatttgcttaatctctttgtgt
ctttgtttttccatttttacaatggagatgggccatcaagatgacccagt
gggtaaagatacttgctacccaagcatgatgaacttgagttccagttttt
gggacccatatggttaagaagaaagacttaacttcttgcaagtttgaatt
gttgcttcacaatgttttatcctgttcccacacatt
gaattctttgtttagctctgtatcccatttttttaatagggttatttggt
tctctggagtctagcttcttgagttctttatatatattggataatatccc
tctatccgatataggattaacaatcttttccccaatttgttagttgctgt
tttgttctattgacagtgtcctttgccttatagaagttttgtaattttat
caggcccatttgtctattgttgatcttagagcataagccattggtgttct
gttcaggaaattttcccctgtgcttatgtgtttgaggctcttccccactt
tctcttctattagtttcagtgtatctggttttatgtggaggtccttgatc
catttggacttgagctttgtacaaagagataagagtggatagattttgca
ttcttctacatgctgacctccagttgaatgagaaccatttgttgaaaatg
ctgtcttttttccactgatggttttagctcctttgtcaaagatcaagtgt
ccataggtgtgtgggttcatttctgggtcttcaattctattccactgatc
ttcctgcctgtctctgtatcaataccatacagtttttaccactattgctc
tgtaatacagcttgatatcttggatggttgattcccctcagaagttcttt
tattgttgagaatagttttcgctatcctgggttttttgttattccaaatg
aatttgcaaattgctccttctaactctatgaagaattgatttggaattct
gatggggattgcattgaatctgtagattgcttttgacaaggtagccattt
ttactatattaatcctgccaatccagaaggcatgggagatctttccatct
tctgagatcttcgattttctttcctttcagagacttgaagttcttgtcat
acacatctttcactttccttagtcacatcaaggtatatattatttgtgac
tattgtgaaggtgttggtttccctatttcttctcagctgtttatcctttg
agtagaggatgctactatttgtttgagttaatttataatcagcgcttgct
gacttttaggagttctctctggtgcaaattgggccatcactaatcaattc
atcgcaatagtgatattttggaactctcgttcaatggtatcctggactct
gtatgaggtcctatgtgtctctggcctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35069212_35070288
seq2: B6Ng01-230P16.b_47_1132 (reverse)

seq1  AATGTGTG---ACATGAT-AAACATGTGGAAGCAACAATTC-AACCTGC-  44
      ||||||||   ||| ||| ||||||   ||||||||||||| ||| ||| 
seq2  AATGTGTGGGAACAGGATAAAACATTGTGAAGCAACAATTCAAACTTGCA  50

seq1  AGAAGTTAGTTCTTTCCTCTT-ACCATATGGGTTCCAAAAACT-GAACTC  92
      ||||||||  |||||| |||| ||||||||||| ||||||||| ||||||
seq2  AGAAGTTAAGTCTTTCTTCTTAACCATATGGGTCCCAAAAACTGGAACTC  100

seq1  -AGTTCATCATGCTT-GGTAGCAAGTATCTTTACCCACTGGGTCATCTTG  140
       |||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAGTTCATCATGCTTGGGTAGCAAGTATCTTTACCCACTGGGTCATCTTG  150

seq1  ATGGCCCATCTCCATTTGTAAAAATGGAAAAACAAAGACACAAAGAGATT  190
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGGCCCATCTCCA-TTGTAAAAATGGAAAAACAAAGACACAAAGAGATT  199

seq1  AAGCAAATTTCCCCAAGATCACATAATTACCAAGAAGCAGGGCACTGGAC  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATTTCCCCAAGATCACATAATTACCAAGAAGCAGGGCACTGGAC  249

seq1  CAGCATGTGTACTGAACACTTCTGTACTAAGAAACCTAAGAACATTCAGT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGTGTACTGAACACTTCTGTACTAAGAAACCTAAGAACATTCAGT  299

seq1  ACAAACTGCTTCCCATTCTCTTCTTCAAAAAATAGAAACTGTTCAGGTAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTGCTTCCCATTCTCTTCTTCAAAAAATAGAAACTGTTCAGGTAT  349

seq1  ATAGAGCTAGGAGTACTTTTCTAAGTTGCTTTCTTACCATTTTCTTAACT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCTAGGAGTACTTTTCTAAGTTGCTTTCTTACCATTTTCTTAACT  399

seq1  GAGTACCTTTTCCACAGTTGGTCTCCATTACTACCTCCTTAACTTCCCGA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACCTTTTCCACAGTTGGTCTCCATTACTACCTCCTTAACTTCCCGA  449

seq1  CAATTAGATCTAACTCTCCATCCCAGTCTGCTCAAGTGTCCAATGATCTG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGATCTAACTCTCCATCCCAGTCTGCTCAAGTGTCCAATGATCTG  499

seq1  TGGTCACTGTGTTACCAAATCAAAGGAGTCCTTCTGGAGCCTCACTCTCC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACTGTGTTACCAAATCAAAGGAGTCCTTCTGGAGCCTCACTCTCC  549

seq1  TTGAATAGTATTGGATTATGCTAACCTCCTTCCTTCTGAAACTACCCCGG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAGTATTGGATTATGCTAACCTCCTTCCTTCTGAAACTACCCCGG  599

seq1  TTCTCTATTCTGGGTCTTCCGATTTCAGATCTCTGATTTCTCTCATGGGA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATTCTGGGTCTTCCGATTTCAGATCTCTGATTTCTCTCATGGGA  649

seq1  GTAACCCATAGAACATTAATTTCTCCCCCTTCTGCCCAAGCCTCGTCAGC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCCATAGAACATTAATTTCTCCCCCTTCTGCCCAAGCCTCGTCAGC  699

seq1  GCTTATATAACAAGCCTGCGCCACCTTACCGGCCCTCAGTCTCTCTTAAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATATAACAAGCCTGCGCCACCTTACCGGCCCTCAGTCTCTCTTAAA  749

seq1  GCTCATTTATCTGATATAAATTGAGGGCTTACTGTGTGCCACAAGGACAC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTATCTGATATAAATTGAGGGCTTACTGTGTGCCACAAGGACAC  799

seq1  TCAGAATGGTCTTGTAGGACTGGGAGTGTAGCTCGGTGTTAAAATACTTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATGGTCTTGTAGGACTGGGAGTGTAGCTCGGTGTTAAAATACTTG  849

seq1  CCTAGCATGCGTGAGACCCTTCGCTCAATATCCAGAATTAGAGAAAGTAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCATGCGTGAGACCCTTCGCTCAATATCCAGAATTAGAGAAAGTAA  899

seq1  AAAAAAAAAAAAAAAACTTTCCACTGAATATTTTACACACTCCTGACTTA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAACTTTCCACTGAATATTTTACACACTCCTGACTTA  949

seq1  AAACTTCCATCAACAGAGTAGTGATTCCTTCTATCAACCATAAGTACATA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCATCAACAGAGTAGTGATTCCTTCTATCAACCATAAGTACATA  999

seq1  CTGCTGCCTTAGTTCAAAACTTGGTAATCATCTTCTATCTTATCCATTTA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCTTAGTTCAAAACTTGGTAATCATCTTCTATCTTATCCATTTA  1049

seq1  ATTTTGTTTTCTATTACTCCCTGATTCCAAAGAATTC  1077
      |||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTTCTATTACTCCCTGATTCCAAAGAATTC  1086