BAC Information

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BAC

Clone NameB6Ng01-232D01
Chromosome6 (Build37)
Map Location 109,551,386 - 109,552,493
singlet/doubletsinglet
Overlap genenone
Upstream geneBhlhb2, Arl8b, Edem1, EG627371, LOC639110, LOC100043720
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232D01.bB6Ng01-232D01.g
ACCGA044589GA044590
length1,1121,147
definitionB6Ng01-232D01.b B6Ng01-232D01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgtttccttgttctaaaaatccagaggttagattaagcccac
ccttattatcctatagtttatcttttcatttgtgccctggctgcttctct
gtgaacactcttatccctctctttggcttgcactctttttcattcttcca
ctaaccctttactttcccctgcttgtcttggcttcctaattatgctgttg
tcctttgtggctatttgggaaactcagtgctcacagttgccctgtgcaat
caatttggtgttgttttgtacatccttcaaagcagacctaagaaacagag
ccctcttcagctggaattaatcaaatttttcccaaaaatatgtctctaga
gaacatggatgaaaattaatacaatagccgagagcattcacagagattat
aacagcattccactcaaaaatgaccttggcttctatagcccttcacctcc
aatcaaattgtaattaatgttgctttaagggacatagcagaatttgttat
taatttgcagctatgcatattttagataaatgctgaggcttatgtttttt
aactatgtaagaaaatacagggatcaagaaataaaatacatacagctatt
tacctctcagtcaaagaaacacatttggaaacaaatctgtaaataagatc
tcctaaatatacaccccagccacagagacacatgccatataataaagata
caacaaagaaactgtctcaacttagcaatagtagttaaagttctattgat
ttctgcttataatctgaataatagtaaaaacttagaaacttttaggacat
ttgtgtgatgatttttcaaggggggggatatattctttgttgatacatac
atatgtacatacatactcataaatatattattagccattgctcccaactg
tgataagttaaaataattaaatgcttcagtacaaagaaacacaagctgtt
tcaatcaggtattattcagaaagcttccatgttttataaagataatcaca
catatgagattataagacatagattaaatcaaaatggcactgaactagaa
atttatcttaatggctagtttcatagcaataagccctctatgtggtgcta
cagaaggaaaaa

gaattcaaacttggacttaatcataattaaataaatacaagggaaagtac
tgaattttttccttaatgtgacacccaaatatttgaggctatttcaatgc
atttaagtgatacattgaaggtcattcacgttattttctttccttagcta
ctgtgaatagagtagcaactaacatgacttaacaaattatctgtgcagag
aatgtcaagtcctttgagcatatgctaagaagtgtcacacctgggtaatg
tggcatatttattttaagtttttgagagctcttcacactaatttcagagt
gaaaagacaagttgtcaatcccaccaacaacaaatgagggtctctttctc
tatatcctctccagcatttattttcagttttttgttggcttggatttttt
taaatctgaccagcataaaatgagattttatatttgttatgagttatgtt
tcctggattgctaagggattattttttagatatttctcaggcatttttag
tttcttcctttgagaactctttgttcacatctcaagcccatttttgaaat
tgtcctttttggactctttgaggtctacataaataaatttggatattaat
cctctattacacatagaggtagcagattttagccaattccatgggtatcc
tcctcattttattgactgtttttagatgttcagaagaatttattgttgta
atatcccatttaatcaattgtcctaattcctgataagcaggctcctgtca
aggaagtccattcctacacctataccatgtagaatactaccaacatttcc
ttccataaattttggtgattttaggcttcacattcagatctatgattgat
ttggagtttcttatgaaaggtgatagattcaagtctaatttcattttttg
acatatgtttaaatcctgtggaagtagcaccatttgttgagatgctctct
tttctccagtttgtttttgcatcttgtcaaacatagatagttatagtaat
gtgtgttggtcttcctatttgttccatcactctatatcctcttttctgct
aaacatgctgctgtatcacctatggtactagaagaatctggtatgattat
tcccctatgccatgcatcttttgctcagattggctttgggcatactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109551386_109552493
seq2: B6Ng01-232D01.b_46_1157

seq1  GAATTCATTGTTTCCTTGTTCTAAAAATCCAGAGGTTAGATTAAGCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTTCCTTGTTCTAAAAATCCAGAGGTTAGATTAAGCCCAC  50

seq1  CCTTATTATCCTATAGTTTATCTTTTCATTTGTGCCCTGGCTGCTTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTATCCTATAGTTTATCTTTTCATTTGTGCCCTGGCTGCTTCTCT  100

seq1  GTGAACACTCTTATCCCTCTCTTTGGCTTGCACTCTTTTTCATTCTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACACTCTTATCCCTCTCTTTGGCTTGCACTCTTTTTCATTCTTCCA  150

seq1  CTAACCCTTTACTTTCCCCTGCTTGTCTTGGCTTCCTAATTATGCTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCCTTTACTTTCCCCTGCTTGTCTTGGCTTCCTAATTATGCTGTTG  200

seq1  TCCTTTGTGGCTATTTGGGAAACTCAGTGCTCACAGTTGCCCTGTGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTGGCTATTTGGGAAACTCAGTGCTCACAGTTGCCCTGTGCAAT  250

seq1  CAATTTGGTGTTGTTTTGTACATCCTTCAAAGCAGACCTAAGAAACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGGTGTTGTTTTGTACATCCTTCAAAGCAGACCTAAGAAACAGAG  300

seq1  CCCTCTTCAGCTGGAATTAATCAAATTTTTCCCAAAAATATGTCTCTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTCAGCTGGAATTAATCAAATTTTTCCCAAAAATATGTCTCTAGA  350

seq1  GAACATGGATGAAAATTAATACAATAGCCGAGAGCATTCACAGAGATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGATGAAAATTAATACAATAGCCGAGAGCATTCACAGAGATTAT  400

seq1  AACAGCATTCCACTCAAAAATGACCTTGGCTTCTATAGCCCTTCACCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCATTCCACTCAAAAATGACCTTGGCTTCTATAGCCCTTCACCTCC  450

seq1  AATCAAATTGTAATTAATGTTGCTTTAAGGGACATAGCAGAATTTGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATTGTAATTAATGTTGCTTTAAGGGACATAGCAGAATTTGTTAT  500

seq1  TAATTTGCAGCTATGCATATTTTAGATAAATGCTGAGGCTTATGTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGCAGCTATGCATATTTTAGATAAATGCTGAGGCTTATGTTTTTT  550

seq1  AACTATGTAAGAAAATACAGGGATCAAGAAATAAAATACATACAGCTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTAAGAAAATACAGGGATCAAGAAATAAAATACATACAGCTATT  600

seq1  TACCTCTCAGTCAAAGAAACACATTTGGAAACAAATCTGTAAATAAGATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTCAGTCAAAGAAACACATTTGGAAACAAATCTGTAAATAAGATC  650

seq1  TCCTAAATATACACCCCAGCCACAGAGACACATGCCATATAATAAAGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAATATACACCCCAGCCACAGAGACACATGCCATATAATAAAGATA  700

seq1  CAACAAAGAAACTGTCTCAACTTAGCAATAGTAGTTAAAGTTCTATTGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAGAAACTGTCTCAACTTAGCAATAGTAGTTAAAGTTCTATTGAT  750

seq1  TTCTGCTTATAATCTGAATAATAGTAAAAACTTAGAAACTTTTAGGACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTATAATCTGAATAATAGTAAAAACTTAGAAACTTTTAGGACAT  800

seq1  TTGTGTGATGATTTTTCAA-GGGGGGGATATATTCTTTGTTGATACATAC  849
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTGTGTGATGATTTTTCAAGGGGGGGGATATATTCTTTGTTGATACATAC  850

seq1  ATATGTACATACATACTCATAAATATATTATTAGCCATTGCTCCCAACTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACATACATACTCATAAATATATTATTAGCCATTGCTCCCAACTG  900

seq1  TGATAAGTT-AAATAATTAAATGCTTCAGTACAAAGAAACACAAGCTGTT  948
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGTTAAAATAATTAAATGCTTCAGTACAAAGAAACACAAGCTGTT  950

seq1  TCAATCAGGTA-TATTCAGAAAGCTTCCATGTTTTATAAAGAT-ATCACA  996
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  TCAATCAGGTATTATTCAGAAAGCTTCCATGTTTTATAAAGATAATCACA  1000

seq1  CATATGAGA-TATAAGACATAGAATAAATCAAAATGGCACTGAACTAGAA  1045
      ||||||||| ||||||||||||| ||||||||||||||||||||||||||
seq2  CATATGAGATTATAAGACATAGATTAAATCAAAATGGCACTGAACTAGAA  1050

seq1  ATTTTATCTTATTGGCTAGGTTTCATAGCAATAAAGCCCTCTATGT-GTG  1094
      | ||||||||| |||||| ||||||||||||| ||||||||||||| |||
seq2  A-TTTATCTTAATGGCTA-GTTTCATAGCAAT-AAGCCCTCTATGTGGTG  1097

seq1  CTACAG-AGGAAAAA  1108
      |||||| ||||||||
seq2  CTACAGAAGGAAAAA  1112


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