BAC Information

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BAC

Clone NameB6Ng01-232N11
Chromosome6 (Build37)
Map Location 140,296,108 - 140,296,843
singlet/doubletsinglet
Overlap geneLOC100039020
Upstream geneEG632971, LOC100043898, Pik3c2g, Plcz1, Capza3, LOC100042680
Downstream geneLOC269810, Plekha5, Aebp2, EG664868, LOC664875, Pde3a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232N11.bB6Ng01-232N11.g
ACCGA045074GA045075
length1,162737
definitionB6Ng01-232N11.b B6Ng01-232N11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattcgatgactctactattgacaatgttgcttggtggctttaa
gaacttgggacaaagttgaggagcctaggaaaaggtctacctcatttaca
aaggttattcaaggccctggagacaccttcactgaattttacaaagatta
gtcttagctgtaaacaaagccatatcagaccctgatacaaggcaggtgtt
ggtagagatcttgacatttgaaaatgaaaataccaaacattaaaaaaaaa
gtaattagagcattaaaggtgcaggcagcacctatgcataattgagtaag
ggagatgactaatattgcttctaatgtgaaacatgctgataaaataggtt
aatccatatttagaagctacagatctaaaaatgcttggtaattcattgtg
agaaatatggtcattagcaacaaaacagtgtacaagatatttctaagggc
aatgatttttcaaaatataaaccagaaagaacatctaggcagtttcattg
gatgatggaggtggtgtggcaagagttaccactggaccaatgagtgtagg
tcacaaagagatattcatggtaatttcttaccatgaggaaagagtcttgg
gagcccctgaagcaaaaattacaagctgttttactcaaggagtaacatgc
agatgaaataatctcaactccacattggagcagtggggatggtcttggag
tagattgacttcccaaggatacattgtgcatccaagaatcatagatgaag
atttttaaaggagaaattaaattatggcctacataaaaagagagatgcaa
attaattcaggggataggattgctcggttgctactgttcctatatcacaa
gcaaagctgttccagttttaaacaaaaacaaaaggcaaaaatcaggaggg
tttgaaagtattggaaagcgtgtgttctggcaaactgctgttaatgatca
gaaggccaaaattcaatgcagtctatggtattgaaatagaagatttgctg
gatcaagagcctgatataacctattattcacagaatcttggaaatccaat
ttcgaagggtatatattctttctgaaattgtcttacttcaaatagactag
tgagaatggttacttgtgatgacctgatgctaaatatgaagttaaggacc
tatcgtatatga
gaattctctatggagtgggcaggggctggtgccatgaggctgagggaaac
cagctttagagaaaggctctaggcctatgcagaggaccagtctacatggc
tgtagtttagagaaactattggtctagtagcctgggacacacaaggcatg
ggcctggcctggagcatcgagccaaatcctgctgcctgggctgtccaagg
gcagctgtaagcaggaacagctctggctagatttatctctcaatttaaat
cgctagtgtgaggctctgcagttgggagtggatgacatttctgataaatc
tactaatgtggctcatgtcattcctctcaatctgtttctgccctattcca
gtttatttttcactaggactcaacgtagtcctggttctgactctgcaaca
tgtttgtttgtgagtttgtttttgtttttgttgttgttgttttaagacag
gttctcactgtgtggtcccacctaacctggaacttcataaaccaggctga
ccttgaactcacagagctctgcctgtctctgtttcccaagtgctggaatt
aaaggtaacccagcccatgttactcttgaactcatagcacctacacctaa
ctgcttacgacctgaacaagactgggacatcaatactctgccatgaatgg
gggacagattcacaagcacacctcccccacccctgggggggggggatcta
taggcagttaatggtggctggtgagagggattttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_140296108_140296843
seq2: B6Ng01-232N11.g_69_805 (reverse)

seq1  AAGAAAATCCCTCTCACCAGCCACCATTAACTGCCTATAGAT-CCCCCCC  49
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAGAAAATCCCTCTCACCAGCCACCATTAACTGCCTATAGATCCCCCCCC  50

seq1  CCCAGGGGTGGGGGAGGTGTGCTTGTGAATCTGTCCCCCATTCATGGCAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGGTGGGGGAGGTGTGCTTGTGAATCTGTCCCCCATTCATGGCAG  100

seq1  AGTATTGATGTCCCAGTCTTGTTCAGGTCTTAAGCAGTTAGGTGTAGGTG  149
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGTATTGATGTCCCAGTCTTGTTCAGGTCGTAAGCAGTTAGGTGTAGGTG  150

seq1  CTATGAGTTCAAGAGTAACATGGGCTGGGTTACCTTTAATTCCAGCACTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGTTCAAGAGTAACATGGGCTGGGTTACCTTTAATTCCAGCACTT  200

seq1  GGGAAACAGAGACAGGCAGAGCTCTGTGAGTTCAAGGTCAGCCTGGTTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACAGAGACAGGCAGAGCTCTGTGAGTTCAAGGTCAGCCTGGTTTA  250

seq1  TGAAGTTCCAGGTTAGGTGGGACCACACAGTGAGAACCTGTCTTAAAACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTCCAGGTTAGGTGGGACCACACAGTGAGAACCTGTCTTAAAACA  300

seq1  ACAACAACAAAAACAAAAACAAACTCACAAACAAACATGTTGCAGAGTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAAAAACAAAAACAAACTCACAAACAAACATGTTGCAGAGTCA  350

seq1  GAACCAGGACTACGTTGAGTCCTAGTGAAAAATAAACTGGAATAGGGCAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAGGACTACGTTGAGTCCTAGTGAAAAATAAACTGGAATAGGGCAG  400

seq1  AAACAGATTGAGAGGAATGACATGAGCCACATTAGTAGATTTATCAGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATTGAGAGGAATGACATGAGCCACATTAGTAGATTTATCAGAAA  450

seq1  TGTCATCCACTCCCAACTGCAGAGCCTCACACTAGCGATTTAAATTGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCCACTCCCAACTGCAGAGCCTCACACTAGCGATTTAAATTGAGA  500

seq1  GATAAATCTAGCCAGAGCTGTTCCTGCTTACAGCTGCCCTTGGACAGCCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCTAGCCAGAGCTGTTCCTGCTTACAGCTGCCCTTGGACAGCCC  550

seq1  AGGCAGCAGGATTTGGCTCGATGCTCCAGGCCAGGCCCATGCCTTGTGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCAGGATTTGGCTCGATGCTCCAGGCCAGGCCCATGCCTTGTGTG  600

seq1  TCCCAGGCTACTAGACCAATAGTTTCTCTAAACTACAGCCATGTAGACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCTACTAGACCAATAGTTTCTCTAAACTACAGCCATGTAGACTG  650

seq1  GTCCTCTGCATAGGCCTAGAGCCTTTCTCTAAAGCTGGTTTCCCTCAGCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTGCATAGGCCTAGAGCCTTTCTCTAAAGCTGGTTTCCCTCAGCC  700

seq1  TCATGGCACCAGCCCCTGCCCACTCCATAGAGAATTC  736
      |||||||||||||||||||||||||||||||||||||
seq2  TCATGGCACCAGCCCCTGCCCACTCCATAGAGAATTC  737