BAC Information

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BAC

Clone NameB6Ng01-234F20
Chromosome6 (Build37)
Map Location 19,702,893 - 19,704,037
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234F20.bB6Ng01-234F20.g
ACCGA046153GA046154
length1,2251,154
definitionB6Ng01-234F20.b B6Ng01-234F20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatggtttagttctgtatcccatttttaatagggttatttgattc
tctgacgtctaacttcttgagttctttttatatattgtatgttaaccctc
tatcagatgtaggattggtaaagatctttccacaaactattggttgccat
ttttcctattgattgtgacctttgtctttcagaagctttacaatattatg
agatcccatttgtacattcttgatcttacagaataacccattggttttct
gttcaggaaaatttcccctgtgccaatgtgtttgtgactcttctccactt
tctcttctagtagtttcagtgtaactgattttatgtggaggtcctagatt
cacttggacttgagatttgcacaagtagatatgaattgatttgcattctt
cgacatgtttacctccagttgaaccagcaccacttattgaaaatgctgtc
atttttccactggatggttttagcttctttgtcacgatcaggtgtctata
agtgacctgatttctgggttcacttctgggtctaaaattctattccatta
atctacctatctctgtaccaatattatacagtatttaccactattgctct
gtaatacagcttgaggtcagggatggtgattcctccagaatttctgttat
tgttgtgaataattttggctatcctggatttttagttattccagatgaat
ttgcaaattgctctttctaactctatgaaaaattgagttggaatttgatg
aggattgcattgaattattagattgctttctgcaagatggccatttttac
tatatcaattatgcctatccatgaacatgggagatctttccaacttttga
gatcttcaatttctttcttcagagacttgaagttcttgtcatatagatct
ttcacttgcttggttagagtcataccatgatatcttagattatttgtgac
tgttgtgaagggtgtcatttccctaatttctttctctctgagtagaagac
tactgattttttgaattaattttatatctactcactttgctgaagttggt
ttatcagctttaggagttctcttggtagaaatttatgtggtccactttca
ggtatactattcataaacattctgccaaaagggaatattttgaaccttcc
tccgttcattggcatcctttttgaaccatttattccatgtgctcaaattg
gctctctcggccgaggaatatgtct

gaattcttagctagctgttattctcaggactgctccacttgaaaaatctt
gtctaatgttctaatatgttaattcagaataaatttgaacctttgaaact
tcaaatgtctaaaggtattgggagagagatggaggtaaaaacaactaatg
ttcagattccttttattaaaaataaaatacttggtgtaaagctgcaatta
tcagtgctagtagacagaataacaatattttttgtgtatctgtgtgtttc
ttatcacatgtacaccctctaaacatcttgaactctgtcttcacatttct
tgttctgttctgtttttttcctgatttcagttttgcaggaggcactcact
atattttacacacagttcttaaactcaccatgttctttctgtacaaacat
gatcaaccctgaattctcattttaccaacctttatggcagtattttggtt
tgctgttggctggcaggtttagaaagtaagctgaaatgagttctactttt
aagaatcttttctctttatccatggaacctttttttttttccttttagct
ctaggcactgacaataaacatactagtgataatagataccacctgctgtt
gtagtgtttaaaattgtctgttgggagaaatgagactgtcaaccattata
agaagccaggtaatatgctatatctgagaattatagaagcaagacacaat
acaagataatggtacccatgggttattgtccccattgccatcccagttaa
agttcttatgattgcacagaaaaggaagttttgctccagaggactgaagg
caattttatgagaagtagtaaaaaacgaacccaagggtgtgagggtcccc
tggctctctcatacctgggtatccctcaagcctctatgtctacctatcac
aacttcataagtctatgtggcttctcatttccacagaccatctgtttcat
gctgcattttaatcatctacactaatgtctctctgttgtgtaaaactctt
acaaagaatatcataactcacttcatcacgctctcaactccagggactat
catcattctggagaactcttttttctattttctcagtagaaatccatctt
ggaaacctgagggaatcttcttatgccattcttactattccattttggta
cttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19702893_19704037
seq2: B6Ng01-234F20.g_64_1217

seq1  GAATTCTTAGCTAGCTGTTATTCTCAGGACTGCTCCACTTGAAAAATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGCTAGCTGTTATTCTCAGGACTGCTCCACTTGAAAAATCTT  50

seq1  GTCTAATGTTCTAATATGTTAATTCAGAATAAATTTGAACCTTTGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAATGTTCTAATATGTTAATTCAGAATAAATTTGAACCTTTGAAACT  100

seq1  TCAAATGTCTAAAGGTATTGGGAGAGAGATGGAGGTAAAAACAACTAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTCTAAAGGTATTGGGAGAGAGATGGAGGTAAAAACAACTAATG  150

seq1  TTCAGATTCCTTTTATTAAAAATAAAATACTTGGTGTAAAGCTGCAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTCCTTTTATTAAAAATAAAATACTTGGTGTAAAGCTGCAATTA  200

seq1  TCAGTGCTAGTAGACAGAATAACAATATTTTTTGTGTATCTGTGTGTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTAGTAGACAGAATAACAATATTTTTTGTGTATCTGTGTGTTTC  250

seq1  TTATCACATGTACACCCTCTAAACATCTTGAACTCTGTCTTCACATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACATGTACACCCTCTAAACATCTTGAACTCTGTCTTCACATTTCT  300

seq1  TGTTCTGTTCTGTTTTTTTCCTGATTTCAGTTTTGCAGGAGGCACTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTGTTCTGTTTTTTTCCTGATTTCAGTTTTGCAGGAGGCACTCACT  350

seq1  ATATTTTACACACAGTTCTTAAACTCACCATGTTCTTTCTGTACAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTACACACAGTTCTTAAACTCACCATGTTCTTTCTGTACAAACAT  400

seq1  GATCAACCCTGAATTCTCATTTTACCAACCTTTATGGCAGTATTTTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAACCCTGAATTCTCATTTTACCAACCTTTATGGCAGTATTTTGGTT  450

seq1  TGCTGTTGGCTGGCAGGTTTAGAAAGTAAGCTGAAATGAGTTCTACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTGGCTGGCAGGTTTAGAAAGTAAGCTGAAATGAGTTCTACTTTT  500

seq1  AAGAATCTTTTCTCTTTATCCATGGAACCTTTTTTTTTTTCCTTTTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTTTTCTCTTTATCCATGGAACCTTTTTTTTTTTCCTTTTAGCT  550

seq1  CTAGGCACTGACAATAAACATACTAGTGATAATAGATACCACCTGCTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCACTGACAATAAACATACTAGTGATAATAGATACCACCTGCTGTT  600

seq1  GTAGTGTTTAAAATTGTCTGTTGGGAGAAATGAGACTGTCAACCATTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTTTAAAATTGTCTGTTGGGAGAAATGAGACTGTCAACCATTATA  650

seq1  AGAAGCCAGGTAATATGCTATATCTGAGAATTATAGAAGCAAGACACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAGGTAATATGCTATATCTGAGAATTATAGAAGCAAGACACAAT  700

seq1  ACAAGATAATGGTACCCATGGGTTATTGTCCCCATTGCCATCCCAGTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATAATGGTACCCATGGGTTATTGTCCCCATTGCCATCCCAGTTAA  750

seq1  AGTTCTTATGATTGCACAGAAAAGGAAGTTTTGCTCCAGAGGACTGAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTATGATTGCACAGAAAAGGAAGTTTTGCTCCAGAGGACTGAAGG  800

seq1  CAATTTTATGAGAAGTAGTAAAAAACGAACCCAAGGGTGTGAGGGTCCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTATGAGAAGTAGTAAAAAACGAACCCAAGGGTGTGAGGGTCCCC  850

seq1  TGGCTCTCTCATACCTGGGTATCCCTCAAGCCTCTATGTCTACCTATCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCTCTCATACCTGGGTATCCCTCAAGCCTCTATGTCTACCTATCAC  900

seq1  AACTTCATAAGTCTATGTGGCTTCTCATTTCCACAGACCCATCTGTTTCA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AACTTCATAAGTCTATGTGGCTTCTCATTTCCACAGA-CCATCTGTTTCA  949

seq1  TGCTGCATTTTAATCATCTACCACTAATGTCTCTCTGTTGTGTAAAACTC  1000
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TGCTGCATTTTAATCATCTA-CACTAATGTCTCTCTGTTGTGTAAAACTC  998

seq1  -TAC-AAGAATATCATAACTCACTTCATCACGCTCTCAACTCCAGGACCT  1048
       ||| |||||||||||||||||||||||||||||||||||||||||  ||
seq2  TTACAAAGAATATCATAACTCACTTCATCACGCTCTCAACTCCAGGGACT  1048

seq1  ATCATCA-TCTGGAG-ACTC-TTTTTCTA-TTTCTCAGTAGAAATCCATC  1094
      ||||||| ||||||| |||| |||||||| ||||||||||||||||||||
seq2  ATCATCATTCTGGAGAACTCTTTTTTCTATTTTCTCAGTAGAAATCCATC  1098

seq1  TT-GAAAACTGAGGGAATAATTCTTATGC--ATCTTACTAT--CATTTT-  1138
      || |||| ||||||||||  |||||||||   |||||||||  |||||| 
seq2  TTGGAAACCTGAGGGAAT-CTTCTTATGCCATTCTTACTATTCCATTTTG  1147

seq1  GTACTTT  1145
      |||||||
seq2  GTACTTT  1154


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