BAC Information

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BAC

Clone NameB6Ng01-236D08
Chromosome6 (Build37)
Map Location 131,928,368 - 132,085,700
singlet/doubletdoublet
Overlap geneLOC639802, EG114600
Upstream geneEG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
Downstream genePrb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236D08.bB6Ng01-236D08.g
ACCGA047484GA047485
length1,0511,191
definitionB6Ng01-236D08.b B6Ng01-236D08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,928,368 - 131,929,216)(132,084,515 - 132,085,700)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactggtta
ccttttaagatggtcagctcaactgctttagtatctgaaagtcctctaca
ccacatagtagcagacaaataaggccaagaactaaaataaaatgccatgt
tatggaagtattgtatgacacatactgctgtaagaatatatatgtgaata
tctttaaatggacaagagtttttatttttggaaaacctttttacagcttg
ttatttctaattacttgtggtatattaagatataaatcagtaagtatttt
caatttacagattcaatgaaatccccatcaaaattccaacttaatttttc
accaagttagaaagggtaatatgcaaattcgtttggaataacaaaaaaaa
tctaggatagcaaaaactaaaagaacttctggggaatcaccattcctgac
ctcaagctgtactacagagcaattgtggaaaactacaaacaaacaaacaa
acaaacaaacaacaacaaaactccatggtactggtggagtgactgtcatt
tagatcaatggaatataattgaagacccacaaatcaacccacacacctat
ggccacttgatctttgacaaagaagctaaaaccatccagtgggaaaacaa
taagatttccaacaaatcgtgctggcttaactggcagtcatattgtagaa
gagtgagaattgatccatacttttctccttgtacaaagctcaaatctaag
tgaatcaaggaattcaacataaaaccagagacactgaaactcatagagtt
gaaagtggggaaaagccatgaaaatatgggcacaggagaaaaatttctga
agagaacagccattacttgtgctgtaagatcaagaatttgacaaatagga
cctcattaaattggaaagattctgtaagtcaaagacactgtcaatagaca
aaaggccgccaaatattgggaaaatatctttaccaatcctatttgatagg
g
gaattcttccccaggtaaactttcctaaaaatggctttttctattctgat
aaactctcttagctagaaaactctttcctgaaatgaaggaagtagaaaag
cctgatgaaatggattaaattgaactagcagactttgatccaagtcaaga
aagacagcatcattataatggagaagagtatgaggatgatgaacatcacc
tcagagatcatattctgtatcagacctcttatggaccagtcactctttga
cattgtgtatgcaacaaggaattgggactctaatcataacatgcttacta
cttgactactgtttttattttaatactcaactataattgtgttttgtaag
ttaaatgaagaataaacatgaatataaaaccttgaaagaataattcttct
ccagaggtggtggtggctgcccataaccagcactgccaggatcaggctaa
tgttcccttttccctttctgtgtttatcccactttctctgaattaaaagg
ttgattatagtgatgagaaagagggctgctatgctccattcctccagctg
tcaggctacaaactgttctataacaccactcttcaaggtccctccctcac
tagcccttccactatggcatcatcggagctatcttcagcttacccctggc
tggcattattaaaggtgtttttcatggtaatttaaattatagcaccattt
caggcatagaacttcacataccccttactgttcacaaatccccaaagtat
cccttaagcatatcaatacacccctgcctcaatgtccaaacgttcctcaa
aggtccaatttcactggaattcctgtcccttgggagcactgccagcctta
ctaggtgtaaaattcgccagggactttctgatattgaaatttaacctcat
tctgggtatgtgaaggtttactcaatgatacttcataacattaatattat
gttaacagggatctaaaaatagcataggacaaagtcaaatttgtattgca
ttttgagatcaaacaagtaacatgacagaaaagctgattcccataataac
ttctgcatccacctagcagaatttgctcttgcttctgagattgtacacca
ccgtgtgtgaatttggagttgttaggttctgcacttaaacctccaagtcc
aggacattgtcctggtttccatttaagtttatcaaacctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_131928368_131929216
seq2: B6Ng01-236D08.b_43_891

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACACTGGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACACTGGTTA  100

seq1  CCTTTTAAGATGGTCAGCTCAACTGCTTTAGTATCTGAAAGTCCTCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAGATGGTCAGCTCAACTGCTTTAGTATCTGAAAGTCCTCTACA  150

seq1  CCACATAGTAGCAGACAAATAAGGCCAAGAACTAAAATAAAATGCCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAGTAGCAGACAAATAAGGCCAAGAACTAAAATAAAATGCCATGT  200

seq1  TATGGAAGTATTGTATGACACATACTGCTGTAAGAATATATATGTGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGTATTGTATGACACATACTGCTGTAAGAATATATATGTGAATA  250

seq1  TCTTTAAATGGACAAGAGTTTTTATTTTTGGAAAACCTTTTTACAGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAATGGACAAGAGTTTTTATTTTTGGAAAACCTTTTTACAGCTTG  300

seq1  TTATTTCTAATTACTTGTGGTATATTAAGATATAAATCAGTAAGTATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCTAATTACTTGTGGTATATTAAGATATAAATCAGTAAGTATTTT  350

seq1  CAATTTACAGATTCAATGAAATCCCCATCAAAATTCCAACTTAATTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTACAGATTCAATGAAATCCCCATCAAAATTCCAACTTAATTTTTC  400

seq1  ACCAAGTTAGAAAGGGTAATATGCAAATTCGTTTGGAATAACAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTTAGAAAGGGTAATATGCAAATTCGTTTGGAATAACAAAAAAAA  450

seq1  TCTAGGATAGCAAAAACTAAAAGAACTTCTGGGGAATCACCATTCCTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGATAGCAAAAACTAAAAGAACTTCTGGGGAATCACCATTCCTGAC  500

seq1  CTCAAGCTGTACTACAGAGCAATTGTGGAAAACTACAAACAAACAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCTGTACTACAGAGCAATTGTGGAAAACTACAAACAAACAAACAA  550

seq1  ACAAACAAACAACAACAAAACTCCATGGTACTGGTGGAGTGACTGTCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAACAACAAAACTCCATGGTACTGGTGGAGTGACTGTCATT  600

seq1  TAGATCAATGGAATATAATTGAAGACCCACAAATCAACCCACACACCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCAATGGAATATAATTGAAGACCCACAAATCAACCCACACACCTAT  650

seq1  GGCCACTTGATCTTTGACAAAGAAGCTAAAACCATCCAGTGGGAAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTTGATCTTTGACAAAGAAGCTAAAACCATCCAGTGGGAAAACAA  700

seq1  TAAGATTTCCAACAAATCGTGCTGGCTTAACTGGCAGTCATATTGTAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATTTCCAACAAATCGTGCTGGCTTAACTGGCAGTCATATTGTAGAA  750

seq1  GAGTGAGAATTGATCCATACTTTTCTCCTTGTACAAAGCTCAAATCTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAGAATTGATCCATACTTTTCTCCTTGTACAAAGCTCAAATCTAAG  800

seq1  TGAATCAAGGAATTCAACATAAAACCAGAGACACTGAAACTCATAGAGT  849
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAAGGAATTCAACATAAAACCAGAGACACTGAAACTCATAGAGT  849

seq1: chr6_132084515_132085700
seq2: B6Ng01-236D08.g_67_1257 (reverse)

seq1  TCAGGTTTGATAA--TTTAATAGAAAACAAGAGCATGT-CTTGACTTGGG  47
      |||||||||||||  || ||| |||| || ||  |||| || ||||||| 
seq2  TCAGGTTTGATAAACTTAAATGGAAACCAGGACAATGTCCTGGACTTGGA  50

seq1  AGTATAAGTGCAGAA-CTAAC-ACT-CAAATCCACAC---GT-GTGTAC-  89
       || ||||||||||| ||||| ||| ||||| |||||   || |||||| 
seq2  GGTTTAAGTGCAGAACCTAACAACTCCAAATTCACACACGGTGGTGTACA  100

seq1  ATCTCAGAAGCAAGAGCAAATTCTGCTAGGTGGATGCAGGAGTTATTATT  139
      ||||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  ATCTCAGAAGCAAGAGCAAATTCTGCTAGGTGGATGCAGAAGTTATTA-T  149

seq1  GGGAATCAGCTTTTTCTGTCATG-TACTTGTTTGATCTCAAAATGCAATA  188
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  GGGAATCAGC-TTTTCTGTCATGTTACTTGTTTGATCTCAAAATGCAATA  198

seq1  CAAATTTTGACTTTGTCCTATGCTTATTTTTTTAGATCCCTGTTAACATA  238
      |||| ||||||||||||||||||   | ||||||||||||||||||||||
seq2  CAAA-TTTGACTTTGTCCTATGC---TATTTTTAGATCCCTGTTAACATA  244

seq1  ATATTAATGTTATGAAGTATCATTTGAGTAAACCTTCACATACCCAGAAT  288
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ATATTAATGTTATGAAGTATCA-TTGAGTAAACCTTCACATACCCAGAAT  293

seq1  GAGGTTAAATTTCAATATCAGAAAGTCCCTGGCGAATTTTACACCTAGTA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTAAATTTCAATATCAGAAAGTCCCTGGCGAATTTTACACCTAGTA  343

seq1  AGGCTGGCAGTGCTCCCAAGGGACAGGAATTCCAGTGAAATTGGACCTTT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGCAGTGCTCCCAAGGGACAGGAATTCCAGTGAAATTGGACCTTT  393

seq1  GAGGAACGTTTGGACATTGAGGCAGGGGTGTATTGATATGCTTAAGGGAT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACGTTTGGACATTGAGGCAGGGGTGTATTGATATGCTTAAGGGAT  443

seq1  ACTTTGGGGATTTGTGAACAGTAAGGGGTATGTGAAGTTCTATGCCTGAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGGGATTTGTGAACAGTAAGGGGTATGTGAAGTTCTATGCCTGAA  493

seq1  ATGGTGCTATAATTTAAATTACCATGAAAAACACCTTTAATAATGCCAGC  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTATAATTTAAATTACCATGAAAAACACCTTTAATAATGCCAGC  543

seq1  CAGGGGTAAGCTGAAGATAGCTCCGATGATGCCATAGTGGAAGGGCTAGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTAAGCTGAAGATAGCTCCGATGATGCCATAGTGGAAGGGCTAGT  593

seq1  GAGGGAGGGACCTTGAAGAGTGGTGTTATAGAACAGTTTGTAGCCTGACA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGACCTTGAAGAGTGGTGTTATAGAACAGTTTGTAGCCTGACA  643

seq1  GCTGGAGGAATGGAGCATAGCAGCCCTCTTTCTCATCACTATAATCAACC  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGAATGGAGCATAGCAGCCCTCTTTCTCATCACTATAATCAACC  693

seq1  TTTTAATTCAGAGAAAGTGGGATAAACACAGAAAGGGAAAAGGGAACATT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTCAGAGAAAGTGGGATAAACACAGAAAGGGAAAAGGGAACATT  743

seq1  AGCCTGATCCTGGCAGTGCTGGTTATGGGCAGCCACCACCACCTCTGGAG  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGATCCTGGCAGTGCTGGTTATGGGCAGCCACCACCACCTCTGGAG  793

seq1  AAGAATTATTCTTTCAAGGTTTTATATTCATGTTTATTCTTCATTTAACT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTATTCTTTCAAGGTTTTATATTCATGTTTATTCTTCATTTAACT  843

seq1  TACAAAACACAATTATAGTTGAGTATTAAAATAAAAACAGTAGTCAAGTA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACACAATTATAGTTGAGTATTAAAATAAAAACAGTAGTCAAGTA  893

seq1  GTAAGCATGTTATGATTAGAGTCCCAATTCCTTGTTGCATACACAATGTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCATGTTATGATTAGAGTCCCAATTCCTTGTTGCATACACAATGTC  943

seq1  AAAGAGTGACTGGTCCATAAGAGGTCTGATACAGAATATGATCTCTGAGG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGACTGGTCCATAAGAGGTCTGATACAGAATATGATCTCTGAGG  993

seq1  TGATGTTCATCATCCTCATACTCTTCTCCATTATAATGATGCTGTCTTTC  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTCATCATCCTCATACTCTTCTCCATTATAATGATGCTGTCTTTC  1043

seq1  TTGACTTGGATCAAAGTCTGCTAGTTCAATTTAATCCATTTCATCAGGCT  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTGGATCAAAGTCTGCTAGTTCAATTTAATCCATTTCATCAGGCT  1093

seq1  TTTCTACTTCCTTCATTTCAGGAAAGAGTTTTCTAGCTAAGAGAGTTTAT  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACTTCCTTCATTTCAGGAAAGAGTTTTCTAGCTAAGAGAGTTTAT  1143

seq1  CAGAATAGAAAAAGCCATTTTTAGGAAAGTTTACCTGGGGAAGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATAGAAAAAGCCATTTTTAGGAAAGTTTACCTGGGGAAGAATTC  1191