BAC Information

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BAC

Clone NameB6Ng01-239H04
Chromosome6 (Build37)
Map Location 147,443,995 - 147,444,428
singlet/doubletsinglet
Overlap geneCcdc91
Upstream geneItpr2, 4933424B01Rik, Fgfr1op2, Tm7sf3, Surb7, EG626175, Stk38l, LOC621842, Arntl2, 1700023A16Rik, Ppfibp1, 1700034J05Rik, 2210417D09Rik, Mrps35, EG545893, Klhdc5, EG665288, LOC100039641, Pthlh, EG622129
Downstream geneLOC100039712, LOC100039727, LOC100039736, Mlstd1, Ergic2, Tmtc1, 1110033J19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239H04.bB6Ng01-239H04.g
ACCGA049870GA049871
length617428
definitionB6Ng01-239H04.b B6Ng01-239H04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaacgttgttactcctcagagaaatgcagactcagaaagaacta
tactgagatttcatgccattccagtcacagtgagtgtgatggaagggaat
cctcagtaaaggtggggaagggaactagccactgtagatgtagggtgtgt
gtgtgtggggccaatatggaactttgtaaaagctgagagctgtttgaaca
tgaagctcagatgacttcttaggtattcagtcaaaggcctccagttggtg
tgtcagagatccctgtgcagctatgtgttttgcagcattgttcacagtag
ctaagttatggtactaacctggtgtccaacagcaggggatggataaagac
agagtggcacacatgcacacatgcacaatgaaattctacccagtcataaa
acagagtcaagttatgtcatttgcaggaaaatggacgtagctggagacca
ttgtctcagaaagataaatattacatacttcttgtttgtgctcctagagt
tttatgtagataaataaaaccacttatacttctatgactagaagtaaaat
tgtcaaggggacaaaggagattaatggaggagggttgacaaaagtgaggg
atagggtaggggatttg
acatctgaaagcaattcctcttggcagtatcatggaaacaggtgccagta
ccaatcacaagagagcattttcatcactgtcatatttaaaatataaccac
tgccgttaattacattctattgatattgattagcaaaatatataaatcaa
agtctcttgatttatatatttctagcatctaactgagcatgacaccagct
ccataaatattgacagatgacaaaaaaaaaacaaaaacaaaaacaaaaaa
aaaaaaacctgcattaactagaaatgtagctcagtgaggagtggttgcct
agcaggttagcatgcacagtgcccatggttcatcttcagaaccaggaaac
aaaatagggaagaaaggcaagaaggtagaaagagagagggaagaagggaa
gaaggaagggagggagtaagggaggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_147443995_147444428
seq2: B6Ng01-239H04.g_62_495 (reverse)

seq1  TTTCCTCCCTTACTCCCTCCCTTCCTTCTTCCCTTCTTCCCTCTCTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCCTTACTCCCTCCCTTCCTTCTTCCCTTCTTCCCTCTCTCTTT  50

seq1  CTACCTTCTTGCCTTTCTTCCCTATTTTGTTTCCTGGTTCTGAAGATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTCTTGCCTTTCTTCCCTATTTTGTTTCCTGGTTCTGAAGATGAA  100

seq1  CCATGGGCACTGTGCATGCTAACCTGCTAGGCAACCACTCCTCACTGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGCACTGTGCATGCTAACCTGCTAGGCAACCACTCCTCACTGAGC  150

seq1  TACATTTCTAGTTAATGCAGGTTTTTTTTTTTTTGTTTTTGTTTTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCTAGTTAATGCAGGTTTTTTTTTTTTTGTTTTTGTTTTTGTTT  200

seq1  TTTTTTTGTCATCTGTCAATATTTATGGAGCTGGTGTCATGCTCAGTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTGTCATCTGTCAATATTTATGGAGCTGGTGTCATGCTCAGTTAG  250

seq1  ATGCTAGAAATATATAAATCAAGAGACTTTGATTTATATATTTTGCTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTAGAAATATATAAATCAAGAGACTTTGATTTATATATTTTGCTAAT  300

seq1  CAATATCAATAGAATGTAATTAACGGCAGTGGTTATATTTTAAATATGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATCAATAGAATGTAATTAACGGCAGTGGTTATATTTTAAATATGAC  350

seq1  AGTGATGAAAATGCTCTCTTGTGATTGGTACTGGCACCTGTTTCCATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGAAAATGCTCTCTTGTGATTGGTACTGGCACCTGTTTCCATGAT  400

seq1  ACTGCCAAGAGGAATTGCTTTCAGATGTGAATTC  434
      ||||||||||||||||||||||||||||||||||
seq2  ACTGCCAAGAGGAATTGCTTTCAGATGTGAATTC  434