BAC Information

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BAC

Clone NameB6Ng01-240D08
Chromosome6 (Build37)
Map Location 133,481,865 - 133,482,731
singlet/doubletsinglet
Overlap geneEG545884
Upstream genePrh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik
Downstream geneEG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6, LOC100043660, Bcl2l14, Lrp6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240D08.bB6Ng01-240D08.g
ACCGA050436GA050437
length8721,160
definitionB6Ng01-240D08.b B6Ng01-240D08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctccactgacctctcaacttaagcatggacgatctgccccac
tcacacagggatgttttgatccattgtctctacgtgatatattgttcagg
ttgttaatatgtttttctaaatttgtgtatgcccaaattcatcagaatct
acatttctaggagtatacacggcagaatatcatagttatatattatagta
agttctcattttggtccttgaaagccaataattttaatccattggcaata
tccttagaaaagttagtatgtatattatgtaaatactgtataaaattgag
gcttacatgaattattttctatgtagaacgttagtttattcatttccaaa
agcacctttcttagaaaattcaatgcttcataatgtctgtggatttcccc
actgcatgattttcttggatatattttgctgcttgtgtactcagaattca
atgttgtggtctgtcatgatgtggttgtggcttcttctgttatttaagtt
agtttcctttccatttttaaatcaaacagggcaaccagcatttaaatatt
tggaaatatatcctgaagctttttatactagaaataatatgaaaactcta
tgatactcattcacattaattttctaagaaatagctcacttacattttct
tttctgtccctgacaagggtaaacctgtgaaaatggggaagtaatgaggt
gtaggagatggagaaagaagagggtgttggctcccattactctcaaattc
tgggggtacaaatagcacttaaggaactttagtatgccttcaatgtttca
ataacttttcttctttccttatgtgtttcagaaagtaccaaataaaaaat
atgttccctcagatgttaaggt
gaattctcacctgaggaataccgaatggccgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagttagaatggctaagatcaaaaattcaggtgccag
cagactctggcgaggatgtggagaaagaggaacacgccttcattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatcccgcaatacctctcctggg
catatatccagaagatgtcccaaccggtaaaaagggcacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaggaacccaga
tgcccctcaacagaggaatggatccaaaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaggca
aatggttggacctggagggcatcatcctaagtgaggtaacacaatcacaa
aagaactcaaataatatgtactcactgataagtggatattagcccagaaa
cttagtatagtgagatacaaggtacagtatgtaaaacacatgaaactgtg
gaagaatgaagaccatagtgtggacactttgtcttttcttagaattggaa
aaaatcaacatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatcaagagactgccatatccagggatccatcccataatta
gcctccaaacaatgacaccattgcatacactagcaagcgtttggtgcaag
gaccgtgatatagctgtctcttgtgagactaggccggggcctaacaaaca
cagaagtggatgctcacagtcaactattggatggatcagagggcccccaa
ttgaggagctagagaaagtatcccagagctaaagagatctgcaaccctgt
agtgcacattatgactaccagtacccggagctctgactctagctgtattt
tgtatcaaaggatgctagtcggtcatacttgcaaggaagctcacttgtca
gccaactttaatgctagtaggaacccagctagaatgggaatggtggttat
agggagacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_133481865_133482731
seq2: B6Ng01-240D08.b_44_915

seq1  GAATTCACCTCCACTGACCTCTCAACTTAAGCATGGACGATCTGCCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTCCACTGACCTCTCAACTTAAGCATGGACGATCTGCCCCAC  50

seq1  TCACACAGGGATGTTTTGATCCATTGTCTCTACGTGATATATTGTTCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGGGATGTTTTGATCCATTGTCTCTACGTGATATATTGTTCAGG  100

seq1  TTGTTAATATGTTTTTCTAAATTTGTGTATGCCCAAATTCATCAGAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAATATGTTTTTCTAAATTTGTGTATGCCCAAATTCATCAGAATCT  150

seq1  ACATTTCTAGGAGTATACACGGCAGAATATCATAGTTATATATTATAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTAGGAGTATACACGGCAGAATATCATAGTTATATATTATAGTA  200

seq1  AGTTCTCATTTTGGTCCTTGAAAGCCAATAATTTTAATCCATTGGCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCATTTTGGTCCTTGAAAGCCAATAATTTTAATCCATTGGCAATA  250

seq1  TCCTTAGAAAAGTTAGTATGTATATTATGTAAATACTGTATAAAATTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGAAAAGTTAGTATGTATATTATGTAAATACTGTATAAAATTGAG  300

seq1  GCTTACATGAATTATTTTCTATGTAGAACGTTAGTTTATTCATTTCCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACATGAATTATTTTCTATGTAGAACGTTAGTTTATTCATTTCCAAA  350

seq1  AGCACCTTTCTTAGAAAATTCAATGCTTCATAATGTCTGTGGATTTCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTTTCTTAGAAAATTCAATGCTTCATAATGTCTGTGGATTTCCCC  400

seq1  ACTGCATGATTTTCTTGGATATATTTTGCTGCTTGTGTACTCAGAATTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATGATTTTCTTGGATATATTTTGCTGCTTGTGTACTCAGAATTCA  450

seq1  ATGTTGTGGTCTGTCATGATGTGGTTGTGGCTTCTTCTGTTATTTAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGGTCTGTCATGATGTGGTTGTGGCTTCTTCTGTTATTTAAGTT  500

seq1  AGTTTCCTTTCCATTTTTAAATCAAACAGGGCAACCAGCATTTAAATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTTTCCATTTTTAAATCAAACAGGGCAACCAGCATTTAAATATT  550

seq1  TGGAAATATATCCTGAAGCTTTTTATACTAGAAATAATATGAAAACTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATATATCCTGAAGCTTTTTATACTAGAAATAATATGAAAACTCTA  600

seq1  TGATACTCATTCACATTAATTTTCTAAGAAATAGCTCACTTACATTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTCATTCACATTAATTTTCTAAGAAATAGCTCACTTACATTTTCT  650

seq1  TTTCTGTCCCTGACAAGGGTAAACCTGTGAAAATGGGGAAGTAATGAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTCCCTGACAAGGGTAAACCTGTGAAAATGGGGAAGTAATGAGGT  700

seq1  GTAGGAGATGGAGAAAGAAGAGGGTGTTGGCTCCCATCACTCTC-AATTC  749
      ||||||||||||||||||||||||||||||||||||| |||||| |||||
seq2  GTAGGAGATGGAGAAAGAAGAGGGTGTTGGCTCCCATTACTCTCAAATTC  750

seq1  T-GGGGTACAAATAGCACTTAAGGAACTTTTAGTATGCCTT-AATGTTTC  797
      | ||||||||||||||||||||||||| ||||||||||||| ||||||||
seq2  TGGGGGTACAAATAGCACTTAAGGAAC-TTTAGTATGCCTTCAATGTTTC  799

seq1  AATAACTTTTC-TCCTTCCTTTTGTGTTTCAGAGAGTACCAGAT-AAAAA  845
      ||||||||||| || |||||| ||||||||||| ||||||| || |||||
seq2  AATAACTTTTCTTCTTTCCTTATGTGTTTCAGAAAGTACCAAATAAAAAA  849

seq1  TATG-TCCTTCAGATGTAAAGGT  867
      |||| ||| |||||||| |||||
seq2  TATGTTCCCTCAGATGTTAAGGT  872