BAC Information

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BAC

Clone NameB6Ng01-241D14
Chromosome6 (Build37)
Map Location 19,389,006 - 19,390,069
singlet/doubletsinglet
Overlap genenone
Upstream geneCttnbp2, EG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241D14.bB6Ng01-241D14.g
ACCGA051195GA051196
length1,0631,193
definitionB6Ng01-241D14.b B6Ng01-241D14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagaaagtctttaatttatttccccttaacccagtggttctaca
gtagagagtggttcagtttccatgagcttgtaggctttcttttgtttttg
tttttgtttttgttcaagtctaggtttaattactgttaatctcatgagat
acaaaaggttatttcaaacttctcgtatctgttgatgtttgctttgtgat
ggattatatggtcaattttggaggagtttccatgaggtcctaagaagata
tgtccttatatgtttgaatgaattgttctatagatgtctgttaggtcaat
ttgattgatagcctatgttagtttcattattttcctgtttatattttgtc
tggatgacctgtctattggtgagtgtgggttgctgaagtctctcactatt
aatgtgtggagttcattgtgtgatttaagctttaggagtgtttcttttat
gtatatgtgttgtgtccagatactgggggcaagtaaggaagcctgagcct
ttgcttgagtttagagacttgtcttgttcacttttgtactggagtgactc
ggctcttcctgtttaagcctgcatttgcctagctaccactggtgtgtcaa
tttcttcataggccccatgatatacacccacaccccttgtcatctcacac
catcccatacatcatctcacataccctcagttactcttccccacccactc
gcgtcatccttcctcaccaaaaatgaaataaaacaatagacaaatacaaa
taaaaataagcatacaagtttgggccacctagggtatatccacctgttca
cataatctcttgacgttgaatgtctgtttctggtcatacctttttttttt
tttaattttttttattaggtattttcctcgtttacattttcaatgctatc
ccaaaggtcccccatatccaccccccccatccctacccaccactccccct
tttgggccctggcgttcccctgtactgggggcatctaaggatggcaggtc
atgggcctctctttggcagtgatggccgactaggccatctggatgcatat
gcagctaggagac

gaattcaagcccagcctgatctacagagtaagttccagaacagctaaacc
cagttaacgaaggagaccatcaaacagagaaaactggtagagatgtaaca
agggcggtatattccatccccagccagcagcagaatttggcagctttggc
catgttctggctttaaagtcaatgatagaagaagggggttatggaatctc
tctgtgtcactaaggaaagccactagttcaggaatttgtcagagttgtct
ctgtgtggacatcaagtaagggcatgtgtgaaactgtgaatgtaggccta
gattgtctcgggacccccaaaatgttggagatgccagagtcatgagatat
ccatggaggaaagctgttaacagggagtcgaaccagcctaaaaagaaaaa
gaaatatattatcagtaataaaaatgaagggagtttgagatctgacatct
gacatgtatgtagacacagagctgagtttgcccagctgcttttccacctt
gctttggtccagtgttttttcactccactctttttttttttttcattgaa
atggtaatgtatattccatgccattgtatgttggaggcctatgatgtgct
ttttaaagtttcattttacaggggctacagttaagagactaccatgagtt
ctcctccacccttctaagtaagactaggtgcatcttcttctattgaggct
agacaaagcagcccagttagaagaaggggatccaaaggcagacaatgtaa
tcagagccagctgttgcttctgtttcaggagtcccacaagaagacccagc
tgtacaactattacatatgtgcagaaggccatctcatgtcctaggcttat
tctatagtttgcagtccagtctccatgaggtcttatgtattctggctagt
tgattctgtagattttccttggtggtattgttggcctgtctggttccttt
caaattcttcctcccattcttttacaaggattccccaagctccacttaat
gtttggctgctgatctaatgtgtcagtttccaaacagtggctggtgaaag
tctttctgacgattagttatgctagcaactgtctcaagtataagcagaac
tattattaagaggtaaacagggtgtctcgaactcatgaaactggtgataa
ccacactccctggggaatatatatcctcgaagggaaaaactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19389006_19390069
seq2: B6Ng01-241D14.b_42_1104 (reverse)

seq1  GTCT-CTAGCTGCATATGCATCAAAAGATGGCCTAGTCGGCCATCACTG-  48
      |||| |||||||||||||||||   |||||||||||||||||||||||| 
seq2  GTCTCCTAGCTGCATATGCATC--CAGATGGCCTAGTCGGCCATCACTGC  48

seq1  CAAAGAGAGGCCCATTGGACTTGCCATCTTTAGATG-CCCCAGTACAGGG  97
      |||||||||||||||  ||| ||||||| ||||||| |||||||||||||
seq2  CAAAGAGAGGCCCAT--GACCTGCCATCCTTAGATGCCCCCAGTACAGGG  96

seq1  GAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGGTAGGGGATGGGGGGGTG  147
      ||||||||||||| |||||||||||| |||||||||||   |||||||||
seq2  GAACGCCAGGGCCCAAAAGGGGGAGT-GGTGGGTAGGGATGGGGGGGGTG  145

seq1  GATATGGGGGACCTTTGGGATAGCATTGAAAATGTAAACGAGGAAAATAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGGGGACCTTTGGGATAGCATTGAAAATGTAAACGAGGAAAATAC  195

seq1  CTAATAAAAAAAATTAAAAAAAAAAAAAAGGTATGACCAGAAACAGACAT  247
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTAATAAAAAAAATT-AAAAAAAAAAAAAGGTATGACCAGAAACAGACAT  244

seq1  TCAACGTCAAGAGATTATGTGAACAGGTGGATATACCCTAGGTGGCCCAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGTCAAGAGATTATGTGAACAGGTGGATATACCCTAGGTGGCCCAA  294

seq1  ACTTGTATGCTTATTTTTATTTGTATTTGTCTATTGTTTTATTTCATTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTATGCTTATTTTTATTTGTATTTGTCTATTGTTTTATTTCATTTT  344

seq1  TGGTGAGGAAGGATGACGC-AGTGGGTGGGGAAGAGTAACTGAGGGTATG  396
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGTGAGGAAGGATGACGCGAGTGGGTGGGGAAGAGTAACTGAGGGTATG  394

seq1  TGAGATGATGTATGGGATGGTGTGAGATGACAAGGGGTGTGGGTGTATAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGATGTATGGGATGGTGTGAGATGACAAGGGGTGTGGGTGTATAT  444

seq1  CATGGGGCCTAT-AAGAAATTGACACACCAGTGGTAGCTAGGCAAATGCA  495
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATGGGGCCTATGAAGAAATTGACACACCAGTGGTAGCTAGGCAAATGCA  494

seq1  GGCTTAAACAGGAAGAGCCGAGTCACTCCAGTACAAAAGTGAACAAGACA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAAACAGGAAGAGCCGAGTCACTCCAGTACAAAAGTGAACAAGACA  544

seq1  AGTCTCTAAACTCAAGCAAAGGCTCAGGCTTCCTTACTTGCCCCCAGTAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTAAACTCAAGCAAAGGCTCAGGCTTCCTTACTTGCCCCCAGTAT  594

seq1  CTGGACACAACACATATACATAAAAGAAACACTCCTAAAGCTTAAATCAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACACAACACATATACATAAAAGAAACACTCCTAAAGCTTAAATCAC  644

seq1  ACAATGAACTCCACACATTAATAGTGAGAGACTTCAGCAACCCACACTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAACTCCACACATTAATAGTGAGAGACTTCAGCAACCCACACTCA  694

seq1  CCAATAGACAGGTCATCCAGACAAAATATAAACAGGAAAATAATGAAACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGACAGGTCATCCAGACAAAATATAAACAGGAAAATAATGAAACT  744

seq1  AACATAGGCTATCAATCAAATTGACCTAACAGACATCTATAGAACAATTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAGGCTATCAATCAAATTGACCTAACAGACATCTATAGAACAATTC  794

seq1  ATTCAAACATATAAGGACATATCTTCTTAGGACCTCATGGAAACTCCTCC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACATATAAGGACATATCTTCTTAGGACCTCATGGAAACTCCTCC  844

seq1  AAAATTGACCATATAATCCATCACAAAGCAAACATCAACAGATACGAGAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGACCATATAATCCATCACAAAGCAAACATCAACAGATACGAGAA  894

seq1  GTTTGAAATAACCTTTTGTATCTCATGAGATTAACAGTAATTAAACCTAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAATAACCTTTTGTATCTCATGAGATTAACAGTAATTAAACCTAG  944

seq1  ACTTGAACAAAAACAAAAACAAAAACAAAAGAAAGCCTACAAGCTCATGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAACAAAAACAAAAACAAAAACAAAAGAAAGCCTACAAGCTCATGG  994

seq1  AAACTGAACCACTCTCTACTGTAGAACCACTGGGTTAAGGGGAAATAAAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAACCACTCTCTACTGTAGAACCACTGGGTTAAGGGGAAATAAAT  1044

seq1  TAAAGACTTTCTAGAATTC  1064
      |||||||||||||||||||
seq2  TAAAGACTTTCTAGAATTC  1063


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