BAC Information

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BAC

Clone NameB6Ng01-247C08
Chromosome6 (Build37)
Map Location 110,454,050 - 110,455,180
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneGrm7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247C08.bB6Ng01-247C08.g
ACCGA055565GA055566
length1741,124
definitionB6Ng01-247C08.b B6Ng01-247C08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ccgagatctttcaacactgaaccaccagacatcatacactagctgttatg
agacccctaacacacatacagtagaggacttccaggtctgtgttcatcca
gagatgatgcacctaaccctcaagagactggagtccccagggaatttaga
ggtcaggtggggtgggggggggtg

gaattccacgtgacatccatgggttataggtggaagagtcaaaagtactt
acactatttactcttttgtcacgtgcagcctcccaccatgacacaacaca
taaaaatatatgatatgtcagcttctttatatttaatttcccaagttcca
aaactacaaacaatgtatttttttttcaattaatagttgtttttattaga
tgttttctttctctgcatttcaaatgtttttcattttcctggtttcccct
ctgaaatcccctgtcctttcccccatccccctgctcaccaacccactcac
tcctgcttcctctatactggggcatagaaccttcacaagaccaaggacct
ctcctcccattgatgactgactaggccactctctgctacatatgcataga
gccatgagttctaccacgtgttttctttggttggtcgtttagtcccatga
agctctgggggttctggttagttcatattgttgttcctcctatggggatg
caaaccccttcagctccttgggtacttcctctagctcatacttcaatcct
tctttcaagggggaacagataaccatggaaggagttacagagacaagtgt
gtagcagagactgaaggaatgaccatccatagactttcccacctggggat
ccatcccatatacaaccaacaaaccatacactcttgcagatgccaacaag
agcttgcttactggagcctgatgtagctgtctcctgtatggctctgccag
tgcctgacaagtaccgaagtggatgttcatagtcatccattggatggagc
actgagcactgtatttttattctctatatgtgaccaagtttgtggtattg
cttataaagtcatttcctaataacccttttttttccttctccctttcaga
aacaggagaaattctgcatgttttgttgttaaatcattcagtatagttat
gaactttcttaaaattcatcctattggaaattatttttttaaattagaat
gacgttacagatattatgtaatgtgaagaatactctagaagatataaagc
aatagagaattcatagcccatactgaaagcagagacttgaaatgtgcatg
catttctgtccacttatcacagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110454050_110455180
seq2: B6Ng01-247C08.g_68_1191 (reverse)

seq1  TGCTGGTGATAAGTGGACAGAAAATGCATGCACAATTTTCAAGTCTCTGC  50
      |||| ||||||||||||||| |||||||||||||  ||||||||||||| 
seq2  TGCT-GTGATAAGTGGACAG-AAATGCATGCACA--TTTCAAGTCTCTG-  45

seq1  CTTTCAGTAATGGGCTATGAATTCTCTATTGCTTTATATCTTCTAGAGTA  100
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGT-ATGGGCTATGAATTCTCTATTGCTTTATATCTTCTAGAGTA  94

seq1  TTCTTCACATTACAATATATTCTGTTAACCGTCATTCTATTTTAAAAAAA  150
      ||||||||||||||  ||| |||||  | |||||||||| ||||||||||
seq2  TTCTTCACATTACATAATA-TCTGT--AACGTCATTCTAATTTAAAAAAA  141

seq1  TAATTTCCAATAGGATGAATTTTAAGAAAGTTCATAACTATACTGAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCCAATAGGATGAATTTTAAGAAAGTTCATAACTATACTGAATGA  191

seq1  TTTAACAACAAAACATGCAGAATTTCTCCTGTTTCTGAAAGGGAGAAGG-  249
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTAACAACAAAACATGCAGAATTTCTCCTGTTTCTGAAAGGGAGAAGGA  241

seq1  AAAAAAAGGGTTATTAGG-AATGACTTTATAAGCAATACCACAAACTTGG  298
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AAAAAAAGGGTTATTAGGAAATGACTTTATAAGCAATACCACAAACTTGG  291

seq1  TCACATATAGAGAATAAAAATACAGTGCTCAGTGCTCCATCCAATGGATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATATAGAGAATAAAAATACAGTGCTCAGTGCTCCATCCAATGGATG  341

seq1  ACTATGAACATCCACTTCGGTACTTGTCAGGCACTGGCAGAGCCATACAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGAACATCCACTTCGGTACTTGTCAGGCACTGGCAGAGCCATACAG  391

seq1  GAGACAGCTACATCAGGCTCCAGTAAGCAAGCTCTTGTTGGCATCTGCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGCTACATCAGGCTCCAGTAAGCAAGCTCTTGTTGGCATCTGCAA  441

seq1  GAGTGTATGGTTTGTTGGTTGTATATGGGATGGATCCCCAGGTGGGAAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTATGGTTTGTTGGTTGTATATGGGATGGATCCCCAGGTGGGAAAG  491

seq1  TCTATGGATGGTCATTCCTTCAGTCTCTGCTACACACTTGTCTCTGTAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGATGGTCATTCCTTCAGTCTCTGCTACACACTTGTCTCTGTAAC  541

seq1  TCCTTCCATGGTTATCTGTTCCCCCTTGAAAGAAGGATTGAAGTATGAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCATGGTTATCTGTTCCCCCTTGAAAGAAGGATTGAAGTATGAGC  591

seq1  TAGAGGAAGTACCCAAGGAGCTGAAGGGGTTTGCATCCCCATAGGAGGAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAAGTACCCAAGGAGCTGAAGGGGTTTGCATCCCCATAGGAGGAA  641

seq1  CAACAATATGAACTAACCAGAACCCCCAGAGCTTCATGGGACTAAACGAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATATGAACTAACCAGAACCCCCAGAGCTTCATGGGACTAAACGAC  691

seq1  CAACCAAAGAAAACACGTGGTAGAACTCATGGCTCTATGCATATGTAGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAAGAAAACACGTGGTAGAACTCATGGCTCTATGCATATGTAGCA  741

seq1  GAGAGTGGCCTAGTCAGTCATCAATGGGAGGAGAGGTCCTTGGTCTTGTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGGCCTAGTCAGTCATCAATGGGAGGAGAGGTCCTTGGTCTTGTG  791

seq1  AAGGTTCTATGCCCCAGTATAGAGGAAGCAGGAGTGAGTGGGTTGGTGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTATGCCCCAGTATAGAGGAAGCAGGAGTGAGTGGGTTGGTGAG  841

seq1  CAGGGGGATGGGGGAAAGGACAGGGGATTTCAGAGGGGAAACCAGGAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGGATGGGGGAAAGGACAGGGGATTTCAGAGGGGAAACCAGGAAAA  891

seq1  TGAAAAACATTTGAAATGCAGAGAAAGAAAACATCTAATAAAAACAACTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACATTTGAAATGCAGAGAAAGAAAACATCTAATAAAAACAACTA  941

seq1  TTAATTGAAAAAAAAATACATTGTTTGTAGTTTTGGAACTTGGGAAATTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGAAAAAAAAATACATTGTTTGTAGTTTTGGAACTTGGGAAATTA  991

seq1  AATATAAAGAAGCTGACATATCATATATTTTTATGTGTTGTGTCATGGTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGAAGCTGACATATCATATATTTTTATGTGTTGTGTCATGGTG  1041

seq1  GGAGGCTGCACGTGACAAAAGAGTAAATAGTGTAAGTACTTTTGACTCTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCTGCACGTGACAAAAGAGTAAATAGTGTAAGTACTTTTGACTCTT  1091

seq1  CCACCTATAACCCATGGATGTCACGTGGAATTC  1131
      |||||||||||||||||||||||||||||||||
seq2  CCACCTATAACCCATGGATGTCACGTGGAATTC  1124


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