BAC Information

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BAC

Clone NameB6Ng01-248G03
Chromosome6 (Build37)
Map Location 34,774,978 - 34,921,539
singlet/doubletdoublet
Overlap geneAgbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik
Upstream geneExoc4, Lrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1
Downstream geneCnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248G03.bB6Ng01-248G03.g
ACCGA056476GA056477
length9371,094
definitionB6Ng01-248G03.b B6Ng01-248G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,774,978 - 34,775,776)(34,920,454 - 34,921,539)
sequence
gaattccatttatatttactcttttgaaattatttgagaatgcttacaaa
atgcatccattatattaaaaagaaacttgaaaaaaaaccaagaaaatcta
aaagtacatgaatgaatgaaagtaaatggtgctgagagatgaactaagca
gcaaagtgtgcagcaaactgggaagactgcttaacaaagagtgcagagaa
agcaaccattaacagtctaagggtgcataggagatgagaaagaacctgtt
caaaactcctcagattcatcgcaaatagcaagtctgtgaatccaaactgt
ccttgtcccactcctagctcagaaagacagaatatactgcagaatgctgc
agcccaagaaaataagtggtacctctcccacagctaccagagatatcttc
ctaggaggaacaaggcatgggtaatcttgcctccaattaactaaggctaa
gttcaaggtgagtgcagagaaaaggacaaacaatcctgctactcaaactt
aaatctttggctagagcttttatcttggtgctgtaccactcaatacctgg
gccctgatcattcttgccttaagcttgtaccatatcaatttaggtaaggg
agaggcacttgaagacctgaagctactgtagccaggcttcagttagaaga
gtcccattgtctccagccccggatccagaactaagacttgcatcttttgc
cttgagagagaaccaagcaatacaacagataacatcctaatctcttccca
aagaatttactccatttgtgacagaggatatagaaagttaaatcttatta
aattcttaaaacctgagcaaatgtggtaaaaagaaattgggcagagattg
ggagaggttgattagaaacacatgctaaactgtatcctggctactttgta
ggagaactggggcgacagctgggaggagccctgaaga
gaattccaggagaggataggacacccactcactgtacctggcctgagagc
tgtgaaggcctttccctgtgaagggctggcagctgtagcccctgatggtc
ctcagagctcccgtgacatgactctgggggctctcctgtgtacccctccc
cccacttactgctcacttctgaaacccactgagtttgtaacatgagacaa
cgccatttatttcaatcaggacactgagtttccagggtaatctctggagg
aaataaaaggcctgtgcgaagctttggatttaactgtctctggcattaaa
aggaggtttcctctgaagagatgtgctgatgaggtgtgtccagttttaga
tcaaaagactgtggaaagagaaggtggctatttctgaggtgattttaatt
cactctttattatgtttttcattatttgtcatctacttgccttcaaagtc
catgagatactttatggcgaggaaagatactcattgctttgtttgtcttg
ttgtttgttcgggttttgggtttttgtttgtttttgttttttcaagacag
cttttcctatgtagccctggctgtcctggaacttgctctgtagaccgggc
tggccttactctcatagttcacctgactcacaagtgctaggatcaaaggc
ctatgataccactgcccggcttactatttctgtttttacagactaacatc
agtgcatgttatgtgagcctgcactctctaacctacacttgagagccaca
accggtggttgctgttattaaataatatatttttacacataaatactgac
cttttagctcctctgaatttctttctgaaaactttttattattcaggtat
tggatttttcatagaataaaactctaattttttttttacttctatttctt
attttatatgcctatgtattttcgtggttggaggaaaaaagttacaactt
ttttattttttaagttctttttttaggttcattttttgccaataattgtt
tctagagcttattttgttctctgaatacattgttccttttttgttcatat
tcttttttgattatgatgtgagtctttaagatatgagaagactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_34774978_34775776
seq2: B6Ng01-248G03.b_46_844

seq1  GAATTCCATTTATATTTACTCTTTTGAAATTATTTGAGAATGCTTACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTATATTTACTCTTTTGAAATTATTTGAGAATGCTTACAAA  50

seq1  ATGCATCCATTATATTAAAAAGAAACTTGAAAAAAAACCAAGAAAATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATCCATTATATTAAAAAGAAACTTGAAAAAAAACCAAGAAAATCTA  100

seq1  AAAGTACATGAATGAATGAAAGTAAATGGTGCTGAGAGATGAACTAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACATGAATGAATGAAAGTAAATGGTGCTGAGAGATGAACTAAGCA  150

seq1  GCAAAGTGTGCAGCAAACTGGGAAGACTGCTTAACAAAGAGTGCAGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTGTGCAGCAAACTGGGAAGACTGCTTAACAAAGAGTGCAGAGAA  200

seq1  AGCAACCATTAACAGTCTAAGGGTGCATAGGAGATGAGAAAGAACCTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCATTAACAGTCTAAGGGTGCATAGGAGATGAGAAAGAACCTGTT  250

seq1  CAAAACTCCTCAGATTCATCGCAAATAGCAAGTCTGTGAATCCAAACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTCCTCAGATTCATCGCAAATAGCAAGTCTGTGAATCCAAACTGT  300

seq1  CCTTGTCCCACTCCTAGCTCAGAAAGACAGAATATACTGCAGAATGCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTCCCACTCCTAGCTCAGAAAGACAGAATATACTGCAGAATGCTGC  350

seq1  AGCCCAAGAAAATAAGTGGTACCTCTCCCACAGCTACCAGAGATATCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCAAGAAAATAAGTGGTACCTCTCCCACAGCTACCAGAGATATCTTC  400

seq1  CTAGGAGGAACAAGGCATGGGTAATCTTGCCTCCAATTAACTAAGGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGGAACAAGGCATGGGTAATCTTGCCTCCAATTAACTAAGGCTAA  450

seq1  GTTCAAGGTGAGTGCAGAGAAAAGGACAAACAATCCTGCTACTCAAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGGTGAGTGCAGAGAAAAGGACAAACAATCCTGCTACTCAAACTT  500

seq1  AAATCTTTGGCTAGAGCTTTTATCTTGGTGCTGTACCACTCAATACCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTGGCTAGAGCTTTTATCTTGGTGCTGTACCACTCAATACCTGG  550

seq1  GCCCTGATCATTCTTGCCTTAAGCTTGTACCATATCAATTTAGGTAAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGATCATTCTTGCCTTAAGCTTGTACCATATCAATTTAGGTAAGGG  600

seq1  AGAGGCACTTGAAGACCTGAAGCTACTGTAGCCAGGCTTCAGTTAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCACTTGAAGACCTGAAGCTACTGTAGCCAGGCTTCAGTTAGAAGA  650

seq1  GTCCCATTGTCTCCAGCCCCGGATCCAGAACTAAGACTTGCATCTTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATTGTCTCCAGCCCCGGATCCAGAACTAAGACTTGCATCTTTTGC  700

seq1  CTTGAGAGAGAACCAAGCAATACAACAGATAACATCCTAATCTCTTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAGAGAACCAAGCAATACAACAGATAACATCCTAATCTCTTCCCA  750

seq1  AAGAATTTACTCCATTTGTGACAGAGGATATAGAAAGTTAAATCTTATT  799
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTACTCCATTTGTGACAGAGGATATAGAAAGTTAAATCTTATT  799

seq1: chr6_34920454_34921539
seq2: B6Ng01-248G03.g_66_1159 (reverse)

seq1  AAGTATTCTCATATCTAAAAGACTTCACAATCATAAATCAAAAAGAATAT  50
      |||| ||||||||||| |||||| |||| |||||||   |||||||||||
seq2  AAGTCTTCTCATATCTTAAAGAC-TCAC-ATCATAATCAAAAAAGAATAT  48

seq1  GAACAAAAAAGGAACATTGTATTCAGAGAACAAAAATAGCTCTAGAAACA  100
      |||||||||||||||| ||||||||||||||||||  |||||||||||||
seq2  GAACAAAAAAGGAACAATGTATTCAGAGAACAAAATAAGCTCTAGAAACA  98

seq1  A-TATTG--CAAAAATGAACCTAAAAAA--GACTTTAAAAAT-AAAAAGT  144
      | |||||   ||||||||||||||||||   |||| |||||| |||||||
seq2  ATTATTGGCAAAAAATGAACCTAAAAAAAGAACTTAAAAAATAAAAAAGT  148

seq1  TGTAACTTTTTTCCTCCAAACAACGAAAATACATAGGCATAT-AAATAAG  193
      ||||||||||||||||| ||| |||||||||||||||||||| |||||||
seq2  TGTAACTTTTTTCCTCC-AACCACGAAAATACATAGGCATATAAAATAAG  197

seq1  AAATAGAAGT-AAAAAAAAATTAGAGTTTTATTCTATG-AAAATCCAATA  241
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  AAATAGAAGTAAAAAAAAAATTAGAGTTTTATTCTATGAAAAATCCAATA  247

seq1  CCTGAATAATAAAA--GTTTCAGAAAGAAATTCAGAGGAGCTAAAAGGTC  289
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  CCTGAATAATAAAAAGTTTTCAGAAAGAAATTCAGAGGAGCTAAAAGGTC  297

seq1  AGTATTTATGTGTAAAAATATATTATTTAATAACAGCAACCACCGGTTGT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTATGTGTAAAAATATATTATTTAATAACAGCAACCACCGGTTGT  347

seq1  GGCTCTCAAGTGTAGGTTAGAGAGTGCAGGCTCACATAACATGCACTGAT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCAAGTGTAGGTTAGAGAGTGCAGGCTCACATAACATGCACTGAT  397

seq1  GTTAGTCTGTAAAAACAGAAATAGTAAGCCGGGCAGTGGTATCATAGGCC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTCTGTAAAAACAGAAATAGTAAGCCGGGCAGTGGTATCATAGGCC  447

seq1  TTTGATCCTAGCACTTGTGAGTCAGGTGAACTATGAGAGTAAGGCCAGCC  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCCTAGCACTTGTGAGTCAGGTGAACTATGAGAGTAAGGCCAGCC  497

seq1  CGGTCTACAGAGCAAGTTCCAGGACAGCCAGGGCTACATAGGAAAAGCTG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTACAGAGCAAGTTCCAGGACAGCCAGGGCTACATAGGAAAAGCTG  547

seq1  TCTTGAAAAAACAAAAACAAACAAAAACCCAAAACCCGAACAAACAACAA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAAAAAACAAAAACAAACAAAAACCCAAAACCCGAACAAACAACAA  597

seq1  GACAAACAAAGCAATGAGTATCTTTCCTCGCCATAAAGTATCTCATGGAC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAACAAAGCAATGAGTATCTTTCCTCGCCATAAAGTATCTCATGGAC  647

seq1  TTTGAAGGCAAGTAGATGACAAATAATGAAAAACATAATAAAGAGTGAAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGCAAGTAGATGACAAATAATGAAAAACATAATAAAGAGTGAAT  697

seq1  TAAAATCACCTCAGAAATAGCCACCTTCTCTTTCCACAGTCTTTTGATCT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCACCTCAGAAATAGCCACCTTCTCTTTCCACAGTCTTTTGATCT  747

seq1  AAAACTGGACACACCTCATCAGCACATCTCTTCAGAGGAAACCTCCTTTT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGACACACCTCATCAGCACATCTCTTCAGAGGAAACCTCCTTTT  797

seq1  AATGCCAGAGACAGTTAAATCCAAAGCTTCGCACAGGCCTTTTATTTCCT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGAGACAGTTAAATCCAAAGCTTCGCACAGGCCTTTTATTTCCT  847

seq1  CCAGAGATTACCCTGGAAACTCAGTGTCCTGATTGAAATAAATGGCGTTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATTACCCTGGAAACTCAGTGTCCTGATTGAAATAAATGGCGTTG  897

seq1  TCTCATGTTACAAACTCAGTGGGTTTCAGAAGTGAGCAGTAAGTGGGGGG  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTTACAAACTCAGTGGGTTTCAGAAGTGAGCAGTAAGTGGGGGG  947

seq1  AGGGGTACACAGGAGAGCCCCCAGAGTCATGTCACGGGAGCTCTGAGGAC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTACACAGGAGAGCCCCCAGAGTCATGTCACGGGAGCTCTGAGGAC  997

seq1  CATCAGGGGCTACAGCTGCCAGCCCTTCACAGGGAAAGGCCTTCACAGCT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGGGCTACAGCTGCCAGCCCTTCACAGGGAAAGGCCTTCACAGCT  1047

seq1  CTCAGGCCAGGTACAGTGAGTGGGTGTCCTATCCTCTCCTGGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCCAGGTACAGTGAGTGGGTGTCCTATCCTCTCCTGGAATTC  1094