BAC Information

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BAC

Clone NameB6Ng01-255O05
Chromosome6 (Build37)
Map Location 146,731,716 - 146,732,852
singlet/doubletsinglet
Overlap geneLOC621842
Upstream geneRassf8, Bhlhb3, Sspn, Itpr2, 4933424B01Rik, Fgfr1op2, Tm7sf3, Surb7, EG626175, Stk38l
Downstream geneArntl2, 1700023A16Rik, Ppfibp1, 1700034J05Rik, 2210417D09Rik, Mrps35, EG545893, Klhdc5, EG665288, LOC100039641, Pthlh, EG622129, Ccdc91, LOC100039712, LOC100039727, LOC100039736
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255O05.bB6Ng01-255O05.g
ACCGA061986GA061987
length1,2321,126
definitionB6Ng01-255O05.b B6Ng01-255O05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctttttaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctccgcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgaactaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggttgttatcatgtagaagatgcgaatcgatccatacttatc
tccttgtactaagtcaaatctaaatggatcaaagaacttcacataaaacc
agagacactgaaactttatgaaggagaaagtgggaaagccttgagatttg
ggcacagggaaaatcctgacgaacagcattgctgtggtctgtagatcaga
atgacaatgggaacctaatgaattccaagtctgcaagcagcaaccgtcat
agccaggactcccacggatttggaaaggatct
gaattcactgatcatcttgtgaaaacccacaccagagtctctgttcaggg
gacccaggctccagctgtggctaccacataagggtttttatacaagaaaa
ataaacgaattaagtctgctaaaaaaaaaaaagggaatataatggtaatt
gcttaaatgttcttaaatatacatggcataaagaatactttgaggctttt
gatcttaaattgtaagtcagaagtcgaaggtaagtagaatacacttagac
aagtaatagaaacttatgttaattcaagtttgtagcctcccccagccttg
aagcaggctgattcagaccttgctgccactgagaatgagaccacctgggg
tggagccttcgacctagatggcacctgccactgctcttctccaagacagt
tgctaccgctgagaggctgaacctgtcttcctgggatattcctgagatag
ctgacaacctgtggacttggcgacctaatgctaacagctctgacagacta
gtgctaacaacttagcaacaaagcatcaagaagcctggtgtggcagggga
tgggctttataagcacagactcttagtaaacattgggccttgatcagaaa
tctgtcttggtctcttctctcggggttctctcccatacagctctggcctc
ccactcaggaacccagttagtgtggccacaggcagctacacaagttacat
aaagagaatggggcacttgtacctatagagatagtaatctctagtaatta
ctagagatagtaatggtggcacatgcctttaatcccagcacttgggaggc
agaggcagacagatttctgagttcgaggccagcctggtctacagagtgag
ttccaggacagccagggctacacagagaaactctgtctcaaaaaaaaaaa
aaaaaaaagagagatagtaatctctgtagaagggaggatttaagtatact
tacataaataaatgtttgagacttttgatcttaaattagacgtgaaaagc
agtgatagggacttatctatcttcagaacagtagaaatttaggctggatc
tcactataaaatcattggtgtaaggacaaaacagggaatagtgcaagacc
ttattccacagataattgttagattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_146731716_146732852
seq2: B6Ng01-255O05.g_69_1194

seq1  GAATTCACTGATCATCTTGTGAAAACCCACACCAGAGTCTCTGTTCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGATCATCTTGTGAAAACCCACACCAGAGTCTCTGTTCAGGG  50

seq1  GACCCAGGCTCCAGCTGTGGCTACCACATAAGGGTTTTTATACAAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCAGGCTCCAGCTGTGGCTACCACATAAGGGTTTTTATACAAGAAAA  100

seq1  ATAAACGAATTAAGTCTGCTAAAAAAAAAAAAGGGAATATAATGGTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACGAATTAAGTCTGCTAAAAAAAAAAAAGGGAATATAATGGTAATT  150

seq1  GCTTAAATGTTCTTAAATATACATGGCATAAAGAATACTTTGAGGCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAATGTTCTTAAATATACATGGCATAAAGAATACTTTGAGGCTTTT  200

seq1  GATCTTAAATTGTAAGTCAGAAGTCGAAGGTAAGTAGAATACACTTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTAAATTGTAAGTCAGAAGTCGAAGGTAAGTAGAATACACTTAGAC  250

seq1  AAGTAATAGAAACTTATGTTAATTCAAGTTTGTAGCCTCCCCCAGCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAATAGAAACTTATGTTAATTCAAGTTTGTAGCCTCCCCCAGCCTTG  300

seq1  AAGCAGGCTGATTCAGACCTTGCTGCCACTGAGAATGAGACCACCTGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGCTGATTCAGACCTTGCTGCCACTGAGAATGAGACCACCTGGGG  350

seq1  TGGAGCCTTCGACCTAGATGGCACCTGCCACTGCTCTTCTCCAAGACAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGCCTTCGACCTAGATGGCACCTGCCACTGCTCTTCTCCAAGACAGT  400

seq1  TGCTACCGCTGAGAGGCTGAACCTGTCTTCCTGGGATATTCCTGAGATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACCGCTGAGAGGCTGAACCTGTCTTCCTGGGATATTCCTGAGATAG  450

seq1  CTGACAACCTGTGGACTTGGCGACCTAATGCTAACAGCTCTGACAGACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAACCTGTGGACTTGGCGACCTAATGCTAACAGCTCTGACAGACTA  500

seq1  GTGCTAACAACTTAGCAACAAAGCATCAAGAAGCCTGGTGTGGCAGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAACAACTTAGCAACAAAGCATCAAGAAGCCTGGTGTGGCAGGGGA  550

seq1  TGGGCTTTATAAGCACAGACTCTTAGTAAACATTGGGCCTTGATCAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTTATAAGCACAGACTCTTAGTAAACATTGGGCCTTGATCAGAAA  600

seq1  TCTGTCTTGGTCTCTTCTCTCGGGGTTCTCTCCCATACAGCTCTGGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTGGTCTCTTCTCTCGGGGTTCTCTCCCATACAGCTCTGGCCTC  650

seq1  CCACTCAGGAACCCAGTTAGTGTGGCCACAGGCAGCTACACAAGTTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAGGAACCCAGTTAGTGTGGCCACAGGCAGCTACACAAGTTACAT  700

seq1  AAAGAGAATGGGGCACTTGTACCTATAGAGATAGTAATCTCTAGTAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAATGGGGCACTTGTACCTATAGAGATAGTAATCTCTAGTAATTA  750

seq1  CTAGAGATAGTAATGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATAGTAATGGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGC  800

seq1  AGAGGCAGACAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGACAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAG  850

seq1  TTCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCAAAAAAAAAAA  900
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTCCAGGACAGCCAGGGCTACACAGAGAAACTCTGTCTCAAAAAAAAAAA  900

seq1  AAAAAAAAGAGAGATAGTAATCTCTGTAGAAGGGAGGATTTAAGTATACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGAGAGATAGTAATCTCTGTAGAAGGGAGGATTTAAGTATACT  950

seq1  TACATAAATAAATGTTTGAGACTTTTGATCTTAAATTAGACGTTGAAAAG  1000
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TACATAAATAAATGTTTGAGACTTTTGATCTTAAATTAGACG-TGAAAAG  999

seq1  CAGGTGATAGGGAACCTAATCTATC-TCAG-ACAGTAGAAATTTAGGCCT  1048
      || ||||||||||  || ||||||| |||| |||||||||||||||| ||
seq2  CA-GTGATAGGGA--CTTATCTATCTTCAGAACAGTAGAAATTTAGG-CT  1045

seq1  TGATCTCACTATTAAAAATTAATTGTGTAAGAACAAAACAGGAGATAGTG  1098
       |||||||||||  ||||| | | ||||||| ||||||||||  ||||||
seq2  GGATCTCACTAT--AAAATCATTGGTGTAAGGACAAAACAGGGAATAGTG  1093

seq1  GAAGAACATTATCCCAACAGATAATATTTGTTTAGATTG  1137
       ||| || |||| || ||||||||   ||| ||||||||
seq2  CAAG-ACCTTATTCC-ACAGATAA---TTG-TTAGATTG  1126