MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-257E09
Chromosome	6 (Build37)
Map Location	31,181,802 - 31,302,442
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Ube2h, Zc3hc1, 2410127E18Rik, 2700094F01Rik, 1700025E21Rik, Cpa2, Cpa4, Cpa5, Cpa1, Tsga14, Mest, Copg2, Copg2, Tsga13, Klf14, LOC100038973, AB041803
Downstream gene	Mkln1, Podxl, EG619959, LOC620104, 1700012A03Rik, Plxna4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ube2h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22214 MGI:104632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zc3hc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232679 MGI:1916023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410127E18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76788 MGI:1924038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2700094F01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72649 MGI:1919899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700025E21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75647 MGI:1922897
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpa2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232680 MGI:3617840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpa4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71791 MGI:1919041
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpa5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74649 MGI:1921899
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109697 MGI:88478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tsga14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83922 MGI:1891414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mest (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17294 MGI:96968
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Copg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54160 MGI:1858683
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Copg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54160 MGI:1858683
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tsga13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116732 MGI:1891413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Klf14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619665 MGI:3577024
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 30 Proteins

name	LOC100038973 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038973
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 198 ESTs, 5 Proteins

name	AB041803 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232685 MGI:2673128
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	Mkln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27418 MGI:1351638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Podxl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27205 MGI:1351317
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG619959 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:619959 MGI:3647032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC620104 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	1700012A03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76382 MGI:1923632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plxna4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243743 MGI:2179061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube2h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42476282 GeneID:22214 MGI:104632
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-conjugating enzyme E2H transcript_id : NM_009459.2

name	Zc3hc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374816 GeneID:232679 MGI:1916023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, C3HC type 1 transcript_id : NM_172735.2

name	2410127E18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130658 GeneID:76788 MGI:1924038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410127E18 gene transcript_id : NM_029742.2

name	2700094F01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254355 GeneID:72649 MGI:1919899
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700094F01 gene transcript_id : NM_178625.3

name	1700025E21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802125 GeneID:75647 MGI:1922897
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700025E21 gene transcript_id : NM_029373.2

name	Cpa2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350483 GeneID:232680 MGI:3617840
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase A2, pancreatic transcript_id : NM_001024698.2

name	Cpa4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802681 GeneID:71791 MGI:1919041
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase A4 transcript_id : NM_027926.2

name	Cpa5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384611 GeneID:74649 MGI:1921899
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase A5 transcript_id : NM_144537.2

name	Cpa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130352 GeneID:109697 MGI:88478
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carboxypeptidase A1 transcript_id : NM_025350.3

name	Tsga14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560772 GeneID:83922 MGI:1891414
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis specific gene A14 transcript_id : NM_031998.2

name	Mest (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678865 GeneID:17294 MGI:96968
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mesoderm specific transcript transcript_id : NM_008590.1

name	Copg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982716 GeneID:54160 MGI:1858683
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coatomer protein complex, subunit gamma 2 transcript_id : NM_017478.2

name	Copg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982716 GeneID:54160 MGI:1858683
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coatomer protein complex, subunit gamma 2 transcript_id : NM_017478.2

name	Tsga13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803085 GeneID:116732 MGI:1891413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis specific gene A13 transcript_id : NM_054073.2

name	Klf14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255031 GeneID:619665 MGI:3577024
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 30 Proteins product : Kruppel-like factor 14 transcript_id : XM_884028.3

name	LOC100038973 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255029 GeneID:100038973
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 198 ESTs, 5 Proteins product : similar to proteasome alpha7/C8 subunit transcript_id : XM_001472015.1

name	Mkln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119637810 GeneID:27418 MGI:1351638
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muskelin 1, intracellular mediator containing kelch motifs transcript_id : NM_013791.2

name	Podxl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328218 GeneID:27205 MGI:1351317
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : podocalyxin-like transcript_id : NM_013723.2

name	EG619959 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377251 GeneID:619959 MGI:3647032
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG619959 transcript_id : XM_895552.2

name	LOC620104 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255034 GeneID:620104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to dentin sialophosphoprotein precursor transcript_id : XM_001472135.1

name	1700012A03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343827 GeneID:76382 MGI:1923632
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700012A03 gene transcript_id : NM_029587.2

name	Plxna4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343440 GeneID:243743 MGI:2179061
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : plexin A4 transcript_id : NM_175750.2

name	Ube2h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678487 CCDS:CCDS19969.1 GeneID:22214 MGI:104632
definition	GO_function : GO:0004840 - ubiquitin conjugating enzyme activity [Evidence IEA]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin-conjugating enzyme E2H protein_id : NP_033485.1

name	Zc3hc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370072 CCDS:CCDS19970.1 GeneID:232679 MGI:1916023
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence IDA]; GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : nuclear interacting partner of anaplastic lymphoma kinase (Alk) product : nuclear interacting partner of ALK protein_id : NP_766323.1

name	2410127E18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037463 CCDS:CCDS19971.1 GeneID:76788 MGI:1924038
definition	codon_start : 1 product : hypothetical protein LOC76788 protein_id : NP_084018.1

name	2700094F01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254356 CCDS:CCDS19972.1 GeneID:72649 MGI:1919899
definition	codon_start : 1 product : hypothetical protein LOC72649 protein_id : NP_848740.3

name	1700025E21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312998 CCDS:CCDS19973.1 GeneID:75647 MGI:1922897
definition	codon_start : 1 product : hypothetical protein LOC75647 protein_id : NP_083649.1

name	Cpa2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67010039 CCDS:CCDS19974.1 GeneID:232680 MGI:3617840
definition	GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IEA]; GO:0004180 - carboxypeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : carboxypeptidase A2, pancreatic protein_id : NP_001019869.1

name	Cpa4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789211 CCDS:CCDS19975.1 GeneID:71791 MGI:1919041
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : carboxypeptidase A4 protein_id : NP_082202.1

name	Cpa5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21362335 CCDS:CCDS19976.1 GeneID:74649 MGI:1921899
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004182 - carboxypeptidase A activity [Evidence IDA]; GO:0004180 - carboxypeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : carboxypeptidase A5 protein_id : NP_653120.1

name	Cpa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54312076 CCDS:CCDS19977.1 GeneID:109697 MGI:88478
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : carboxypeptidase A1 protein_id : NP_079626.2

name	Tsga14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14030773 CCDS:CCDS19978.1 GeneID:83922 MGI:1891414
definition	GO_function : GO:0004792 - thiosulfate sulfurtransferase activity [Evidence IEA] GO_process : GO:0008272 - sulfate transport [Evidence IEA] codon_start : 1 product : testis specific gene A14 protein_id : NP_114387.1

name	Mest (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678866 CCDS:CCDS19979.1 GeneID:17294 MGI:96968
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA] codon_start : 1 note : mesoderm-specific transcript product : mesoderm specific transcript protein_id : NP_032616.1

name	Copg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8567340 GeneID:54160 MGI:1858683
definition	GO_component : GO:0030126 - COPI vesicle coat [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0019028 - viral capsid [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0009086 - methionine biosynthesis [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : coatomer protein complex, subunit gamma 2 protein_id : NP_059506.1

name	Copg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8567340 GeneID:54160 MGI:1858683
definition	GO_component : GO:0030126 - COPI vesicle coat [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0019028 - viral capsid [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0009086 - methionine biosynthesis [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : coatomer protein complex, subunit gamma 2 protein_id : NP_059506.1

name	Tsga13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19387858 CCDS:CCDS19980.1 GeneID:116732 MGI:1891413
definition	codon_start : 1 note : variegated monoallelic expression 1 product : testis specific gene A13 protein_id : NP_473414.1

name	Klf14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255032 GeneID:619665 MGI:3577024
definition	codon_start : 1 product : similar to Kruppel-like factor 14 protein_id : XP_889121.3

name	LOC100038973 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255030 GeneID:100038973
definition	codon_start : 1 product : similar to proteasome alpha7/C8 subunit protein_id : XP_001472065.1

name	Mkln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305271 CCDS:CCDS19982.1 GeneID:27418 MGI:1351638
definition	codon_start : 1 product : muskelin 1, intracellular mediator containing kelch motifs protein_id : NP_038819.1

name	Podxl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328219 CCDS:CCDS19983.1 GeneID:27205 MGI:1351317
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0050900 - leukocyte migration [Evidence IMP] codon_start : 1 product : podocalyxin-like protein_id : NP_038751.2

name	EG619959 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82900777 GeneID:619959 MGI:3647032
definition	codon_start : 1 product : hypothetical protein protein_id : XP_900645.1

name	LOC620104 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255035 GeneID:620104
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472185.1

name	1700012A03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313178 CCDS:CCDS19984.1 GeneID:76382 MGI:1923632
definition	codon_start : 1 product : hypothetical protein LOC76382 protein_id : NP_083863.1

name	Plxna4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461143 CCDS:CCDS19985.1 GeneID:243743 MGI:2179061
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0017154 - semaphorin receptor activity [Evidence IGI] GO_process : GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IGI]; GO:0007165 - signal transduction [Evidence IGI] codon_start : 1 exception : mismatches in translation product : plexin A4 protein_id : NP_786926.1

name	(CDS detail)
type	STS
link
xref	UniSTS:122659
definition	standard_name : 01.MMHAP57FRA7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:207933
definition	standard_name : RH126895

name	(CDS detail)
type	STS
link
xref	UniSTS:210207
definition	standard_name : RH136212

name	(CDS detail)
type	STS
link
xref	UniSTS:235395
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165456
definition	standard_name : AI593221

name	(CDS detail)
type	STS
link
xref	UniSTS:235397
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165455
definition	standard_name : AI428435

name	(CDS detail)
type	STS
link
xref	UniSTS:162681
definition	standard_name : RH125969

name	(CDS detail)
type	STS
link
xref	UniSTS:235399
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:164319
definition	standard_name : AV009555

name	(CDS detail)
type	STS
link
xref	UniSTS:212421
definition	standard_name : RH129113

name	(CDS detail)
type	STS
link
xref	UniSTS:130682
definition	standard_name : D6Mit140

name	(CDS detail)
type	STS
link
xref	UniSTS:466534
definition	standard_name : TSGA14__5148

name	(CDS detail)
type	STS
link
xref	UniSTS:164316
definition	standard_name : AI503610

name	(CDS detail)
type	STS
link
xref	UniSTS:235396
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:164318
definition	standard_name : AI449046

name	(CDS detail)
type	STS
link
xref	UniSTS:130859
definition	standard_name : D6Mit308

name	(CDS detail)
type	STS
link
xref	UniSTS:235400
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:273482
definition	standard_name : PMC85624P2

name	(CDS detail)
type	STS
link
xref	UniSTS:210083
definition	standard_name : RH136088

name	(CDS detail)
type	STS
link
xref	UniSTS:161607
definition	standard_name : RH124785

name	(CDS detail)
type	STS
link
xref	UniSTS:164902
definition	standard_name : Copg2as1

name	(CDS detail)
type	STS
link
xref	UniSTS:179354
definition	standard_name : AW227625

name	(CDS detail)
type	STS
link
xref	UniSTS:164901
definition	standard_name : Copg2

name	(CDS detail)
type	STS
link
xref	UniSTS:164911
definition	standard_name : Copg2as2

name	(CDS detail)
type	STS
link
xref	UniSTS:164317
definition	standard_name : AW049845

name	(CDS detail)
type	STS
link
xref	UniSTS:122906
definition	standard_name : 07.MMHAP86FRC7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:162160
definition	standard_name : RH125338

name	(CDS detail)
type	STS
link
xref	UniSTS:232020
definition	standard_name : RH142773

name	(CDS detail)
type	STS
link
xref	UniSTS:235398
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:227771
definition	standard_name : D4Rat225

name	(CDS detail)
type	STS
link
xref	UniSTS:123233
definition	standard_name : 14.MMHAP82FLE2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130715
definition	standard_name : MT1717

name	(CDS detail)
type	STS
link
xref	UniSTS:130716
definition	standard_name : D6Mit172.2

name	(CDS detail)
type	STS
link
xref	UniSTS:110736
definition	standard_name : AU047206

name	(CDS detail)
type	STS
link
xref	UniSTS:118824
definition	standard_name : D4Rat23

name	(CDS detail)
type	STS
link
xref	UniSTS:185660
definition	standard_name : BB154892

name	(CDS detail)
type	STS
link
xref	UniSTS:207934
definition	standard_name : AU015903

name	(CDS detail)
type	STS
link
xref	UniSTS:122686
definition	standard_name : 02.MHAa56e2.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:211927
definition	standard_name : RH128619

name	(CDS detail)
type	STS
link
xref	UniSTS:165457
definition	standard_name : AW121214

name	(CDS detail)
type	STS
link
xref	UniSTS:130783
definition	standard_name : MT679

name	(CDS detail)
type	STS
link
xref	UniSTS:130784
definition	standard_name : D6Mit237.2

name	(CDS detail)
type	STS
link
xref	UniSTS:495160
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:116601
definition	standard_name : D6Mit48

name	(CDS detail)
type	STS
link
xref	UniSTS:130984
definition	standard_name : D6Mit81

name	(CDS detail)
type	STS
link
xref	UniSTS:116599
definition	standard_name : D6Mit51

name	(CDS detail)
type	STS
link
xref	UniSTS:179356
definition	standard_name : AI429084

name	(CDS detail)
type	STS
link
xref	UniSTS:130897
definition	standard_name : D6Mit341

name	(CDS detail)
type	STS
link
xref	UniSTS:116600
definition	standard_name : D6Mit47

name	(CDS detail)
type	STS
link
xref	UniSTS:10408
definition

name	AB041803 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255033 GeneID:232685 MGI:2673128
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : cDNA sequence AB041803 transcript_id : XR_035177.1

clone name	MSMg01-289I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134N07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-162L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175O15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-257E09.b	B6Ng01-257E09.g
ACC	GA063016	GA063017
length	632	1,167
definition	B6Ng01-257E09.b	B6Ng01-257E09.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(31,181,802 - 31,182,433)	(31,301,263 - 31,302,442)
sequence	gaattcttcctagttggctttataaatacataaaactgagataaaacata aatactaatgaatctagttatttttctattactctgatgagataccctga ccaaggcagcttatggaagaaattgtttattgcgggtttatgattccata cggtccatgaccgtccctgttgggagcttggcagcagacaggcaggcacg gagccagagcagtagctgaaaacttgggtcacaatcaggaggcaaagaga gagagagagatcatactaggaaaggctcaaatcttttgaaacctcaaggc cttcacttggtgacacacttctaacaaggccacacctccttgtcctttcc acacaattataccaactggggagtcaacattcaaatatatgatcctatgg cagtcattctcctccacagcaccatagtgtgtttgtgagtgtgtctgtgt agctgtgtgagagtgtccctgtgtgtgtaggtatgtccatatgtgtgcct gtgcttacagagttatttcttaggagccttccaaggtaggtcttcgggtc caggggatgggggtgggcatggttgttgtttttgcatttctggctttgtt tttttgttggtggtggtagtgatttgtttgtt	gaattcagcttttgcctactcttcttaacctctctggaagttggtcaggg tcacttggtgaccacttagtgattagatgttaatgggtgccaacttcctt gccttgtcattatacagatctctatggggcttcctgccccactggctgaa tggaagtaaccttggggaagatggagctacaggttggaagaagcctgtgt ccctgaattactagatagccccttttctaagtcataccggattatgagat gaacggtggtacattggtactgagtcaactcactgaaatttgaagatcag ttgctgtaatttgcctatcctgaccaattgaccctatttgccaactttcc tctgggtcatggtaggtagagagaggcataagtctctggagtctcagatg atccagataaatggaggaatccaacggctggggagttgcttcagtggctg agagcacttgttgctcttacagaagacctgagtattctcagcacctacat ggtggcttacaatgggatctaactcccattccagggcatctggcatcctc tggcctccatgggcaccaggtatgcacactgtgcacttacatccaggtaa gcaaaacactcatacacatgaaataaatcttttttactttctaaaagaag gcatttagtaccaatctcaacattaaatattatagtatctggcagattcc ggaataaaatctagaagccttagacattcctatgggaccatagaggccac ctgtgctcctccatccaacccactaagtgcccctctggacatgtttatac ccttgagaacagcaagtagccatctccaaacagcggccacgtgaatcccc aacatgaccaattgatttcatatatttagagtccaaataaagccatattt aatcctacttgtttctgcctttgttttttattttgtctgaacatgctgat taagaagaacaaaataaattgtaaagcaactttatgtccaagagtgtact ttttttaaagtgatataagatgtggtagcacagtcctaaaggacatttga gacccaaacatcatgttgaaaatggagacttggttactgctgagatgtta tgagaacattggttacttaccaactttggaattagtctgtctcaagtagc tctcaaggattaaggac
quality values	Open. Hide. 62 41 39 31 62 62 62 62 62 62 62 47 62 62 62 62 59 59 62 49 62 62 62 62 62 62 62 62 62 59 62 51 59 56 48 50 43 43 35 27 32 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 59 62 59 62 54 54 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 42 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 54 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 46 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 48 58 58 58 58 58 58 54 58 58 58 58 54 58 58 58 49 58 42 39 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 54 58 58 51 58 58 58 58 58 53 49 58 58 58 58 58 58 58 50 58 58 58 58 50 58 58 58 58 58 58 50 50 54 58 39 43 43 43 48 43 38 42 51 51 51 58 49 32 58 44 35 24 44 48 39 20 25	Open. Hide. 62 49 47 44 62 59 59 44 59 62 56 59 59 46 62 59 46 32 33 56 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 59 62 62 62 62 62 62 54 59 62 62 59 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 47 58 58 58 54 47 58 58 58 58 58 58 58 58 54 54 58 58 58 54 42 58 58 58 54 52 58 58 58 58 58 58 54 58 58 58 58 58 54 58 49 48 58 54 58 58 47 58 58 58 58 58 58 45 58 58 54 58 58 54 54 58 58 52 54 49 58 58 58 58 58 58 49 58 58 58 50 58 50 58 58 49 48 58 58 41 42 58 49 58 50 58 58 54 51 52 58 58 58 53 58 58 58 49 54 58 58 58 58 58 49 52 53 58 51 49 53 53 58 58 58 58 51 52 51 51 58 58 52 46 33 58 58 51 40 58 43 22 39 27 42 58 58 50 49 51 51 52 50 49 50 50 51 53 53 53 37 46 47 31 44 50 39 58 39 39 42 53 41 52 53 47 41 52 52 53 58 53 54 54 39 47 26 38 30 54 52 53 52 37 54 29 37 26 54 54 40 47 52 53 54 35 33 39 30 54 54 51 45 38 40 41 40 32 51 47 39 53 39 52 36 39 54 46 37 20 29 24 41 37 39 28 19 37 30 47 32 35 51 42 51 29 33 47 40 40 46 24 30 42 29 42 33 31 25 27 29 51 40 36 41 23 21 52 31 32 41 45 52 51 36 35 40 28 45 33 28 26 25 32 46 24 51 30 39 35 21 18 51 43 31 31 31 36 31 33 23 29 19 30 30 31 40 42 38 42 31 29 40 23 32 32 31 34 45 18 51 33 30 23 31 31 15 32 30 31 31 31 31 34 36 30 15 33 34 48 46 29 24 27 31 23 36 38 38 22 28 30 30 30 42 35 30 25 48 46 36 32 32 31 31 27 32 48 41 31 32 41 32 32 34 32 21 46 28 31 31 44 27 31 38 35 29 31 30 30 48 39 24 44 31 33 27 21 26 31 30 21 29 22 47 25 31 27 37 21 21 30 48 32 31 10 48 48 48 32 17 6 10 38 48 36 29 15 27 32 26 24 25 19 18 31 34 32 19 21 14 10 37 17 33 17 34 32 23 28 30 7 5 31 48 12 8 9 19 9 19 5 8 13 4 37 6 6 12 8 10 32 33 43 30 10 12 5 5 17 19 37 10 7 7 5 7 11 19 18 16 20 34 34 29 38 26 13 17 27 18 28 20 23 25 15 3 12 13 18 6 21 17 22 24 19 21 3 5 23 7 12 13 21 28 28 27 14 9 8 38 18 11 8 11 6 25 15 38 15 11 5 8 6 8 27 21 8 40 11 20 9 23 22 9 16 23 16 23 19 24 28 28 13 11 10 5 7 5 10 10 7 7 16 24 6 8 13 7 11 6 18 7 9 21 6 12 13 16 19 7 5 4 6 14 10 5 7 16 9 25 25 5 7 17 10 13 14 7 12 13 11 11 9 11 5 5 22 22 7 7 17 16 8 9 2 1 3 6 9 8 4 6 10 8 6 7 13 6 3 4 22 5 7 7 6 13 9 23 11 2 4 7 2 4 24 19 5 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_31181802_31182433
seq2: B6Ng01-257E09.b_43_674

seq1  GAATTCTTCCTAGTTGGCTTTATAAATACATAAAACTGAGATAAAACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTAGTTGGCTTTATAAATACATAAAACTGAGATAAAACATA  50

seq1  AATACTAATGAATCTAGTTATTTTTCTATTACTCTGATGAGATACCCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAATGAATCTAGTTATTTTTCTATTACTCTGATGAGATACCCTGA  100

seq1  CCAAGGCAGCTTATGGAAGAAATTGTTTATTGCGGGTTTATGATTCCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGCAGCTTATGGAAGAAATTGTTTATTGCGGGTTTATGATTCCATA  150

seq1  CGGTCCATGACCGTCCCTGTTGGGAGCTTGGCAGCAGACAGGCAGGCACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCATGACCGTCCCTGTTGGGAGCTTGGCAGCAGACAGGCAGGCACG  200

seq1  GAGCCAGAGCAGTAGCTGAAAACTTGGGTCACAATCAGGAGGCAAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAGCAGTAGCTGAAAACTTGGGTCACAATCAGGAGGCAAAGAGA  250

seq1  GAGAGAGAGATCATACTAGGAAAGGCTCAAATCTTTTGAAACCTCAAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGATCATACTAGGAAAGGCTCAAATCTTTTGAAACCTCAAGGC  300

seq1  CTTCACTTGGTGACACACTTCTAACAAGGCCACACCTCCTTGTCCTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTTGGTGACACACTTCTAACAAGGCCACACCTCCTTGTCCTTTCC  350

seq1  ACACAATTATACCAACTGGGGAGTCAACATTCAAATATATGATCCTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATTATACCAACTGGGGAGTCAACATTCAAATATATGATCCTATGG  400

seq1  CAGTCATTCTCCTCCACAGCACCATAGTGTGTTTGTGAGTGTGTCTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATTCTCCTCCACAGCACCATAGTGTGTTTGTGAGTGTGTCTGTGT  450

seq1  AGCTGTGTGAGAGTGTCCCTGTGTGTGTAGGTATGTCCATATGTGTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTGAGAGTGTCCCTGTGTGTGTAGGTATGTCCATATGTGTGCCT  500

seq1  GTGCTTACAGAGTTATTTCTTAGGAGCCTTCCAAGGTAGGTCTTCGGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTACAGAGTTATTTCTTAGGAGCCTTCCAAGGTAGGTCTTCGGGTC  550

seq1  CAGGGGATGGGGGTGGGCATGGTTGTTGTTTTTGCATTTCTGGCTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGATGGGGGTGGGCATGGTTGTTGTTTTTGCATTTCTGGCTTTGTT  600

seq1  TTTTTGTTGGTGGTGGTAGTGATTTGTTTGTT  632
      ||||||||||||||||||||||||||||||||
seq2  TTTTTGTTGGTGGTGGTAGTGATTTGTTTGTT  632

seq1: chr6_31301263_31302442
seq2: B6Ng01-257E09.g_68_1234 (reverse)

seq1  GTCCTTAATACCTTGAG-GCTACTTGAAGACAGACTTAAATCTCAAAGTT  49
      ||||||||| ||||||| |||||||| |||||||||  |||  |||||||
seq2  GTCCTTAAT-CCTTGAGAGCTACTTG-AGACAGACT--AATTCCAAAGTT  46

seq1  GGTAAGTAAACAAATGTTTCCTCATAACATCTTCAGGCAAGTACCCAAAG  99
      ||||||| ||| ||||||  ||||||||||| ||||   |||| ||||  
seq2  GGTAAGT-AACCAATGTT--CTCATAACATC-TCAG--CAGTAACCAA--  88

seq1  GTCT-CATTTTCAACATGATGTTTGGGTCCTCAAATTGTCCTTTAGGACT  148
      |||| ||||||||||||||||||||||| |||||| ||||||||||||||
seq2  GTCTCCATTTTCAACATGATGTTTGGGT-CTCAAA-TGTCCTTTAGGACT  136

seq1  GTGCCTAACCACATCTTATAATCACTTT-AAAAAAGTACACTCTTGGACA  197
      ||||   |||||||||||| |||||||| |||||||||||||||||||||
seq2  GTGC--TACCACATCTTAT-ATCACTTTAAAAAAAGTACACTCTTGGACA  183

seq1  TAAAGTTGCTTAACAATTTA-TTTGTTCTTCTTAATCAGCATGTTCAGAC  246
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  TAAAGTTGCTTTACAATTTATTTTGTTCTTCTTAATCAGCATGTTCAGAC  233

seq1  AAAATAAAAAACAAAGGCAGAAACAAGTAGGATTAAATATGGCTTTATTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAACAAAGGCAGAAACAAGTAGGATTAAATATGGCTTTATTT  283

seq1  GGACTCTAAATATATGAAATCAATTGGTCATGTTGGGGATTCACGTGGCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTAAATATATGAAATCAATTGGTCATGTTGGGGATTCACGTGGCC  333

seq1  GCTGTTTGGAGATGGCTACTTGCTGTTCTCAAGGGTATAAACATGTCCAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGGAGATGGCTACTTGCTGTTCTCAAGGGTATAAACATGTCCAG  383

seq1  AGGGGCACTTAGTGGGTTGGATGGAGGAGCACAGGTGGCCTCTATGGTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCACTTAGTGGGTTGGATGGAGGAGCACAGGTGGCCTCTATGGTCC  433

seq1  CATAGGAATGTCTAAGGCTTCTAGATTTTATTCCGGAATCTGCCAGATAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGAATGTCTAAGGCTTCTAGATTTTATTCCGGAATCTGCCAGATAC  483

seq1  TATAATATTTAATGTTGAGATTGGTACTAAATGCCTTCTTTTAGAAAGTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTTAATGTTGAGATTGGTACTAAATGCCTTCTTTTAGAAAGTA  533

seq1  AAAAAGATTTATTTCATGTGTATGAGTGTTTTGCTTACCTGGATGTAAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATTTATTTCATGTGTATGAGTGTTTTGCTTACCTGGATGTAAGT  583

seq1  GCACAGTGTGCATACCTGGTGCCCATGGAGGCCAGAGGATGCCAGATGCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGTGTGCATACCTGGTGCCCATGGAGGCCAGAGGATGCCAGATGCC  633

seq1  CTGGAATGGGAGTTAGATCCCATTGTAAGCCACCATGTAGGTGCTGAGAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAATGGGAGTTAGATCCCATTGTAAGCCACCATGTAGGTGCTGAGAA  683

seq1  TACTCAGGTCTTCTGTAAGAGCAACAAGTGCTCTCAGCCACTGAAGCAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGGTCTTCTGTAAGAGCAACAAGTGCTCTCAGCCACTGAAGCAAC  733

seq1  TCCCCAGCCGTTGGATTCCTCCATTTATCTGGATCATCTGAGACTCCAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGCCGTTGGATTCCTCCATTTATCTGGATCATCTGAGACTCCAGA  783

seq1  GACTTATGCCTCTCTCTACCTACCATGACCCAGAGGAAAGTTGGCAAATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATGCCTCTCTCTACCTACCATGACCCAGAGGAAAGTTGGCAAATA  833

seq1  GGGTCAATTGGTCAGGATAGGCAAATTACAGCAACTGATCTTCAAATTTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCAATTGGTCAGGATAGGCAAATTACAGCAACTGATCTTCAAATTTC  883

seq1  AGTGAGTTGACTCAGTACCAATGTACCACCGTTCATCTCATAATCCGGTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTTGACTCAGTACCAATGTACCACCGTTCATCTCATAATCCGGTA  933

seq1  TGACTTAGAAAAGGGGCTATCTAGTAATTCAGGGACACAGGCTTCTTCCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAGAAAAGGGGCTATCTAGTAATTCAGGGACACAGGCTTCTTCCA  983

seq1  ACCTGTAGCTCCATCTTCCCCAAGGTTACTTCCATTCAGCCAGTGGGGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAGCTCCATCTTCCCCAAGGTTACTTCCATTCAGCCAGTGGGGCA  1033

seq1  GGAAGCCCCATAGAGATCTGTATAATGACAAGGCAAGGAAGTTGGCACCC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCCATAGAGATCTGTATAATGACAAGGCAAGGAAGTTGGCACCC  1083

seq1  ATTAACATCTAATCACTAAGTGGTCACCAAGTGACCCTGACCAACTTCCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATCTAATCACTAAGTGGTCACCAAGTGACCCTGACCAACTTCCA  1133

seq1  GAGAGGTTAAGAAGAGTAGGCAAAAGCTGAATTC  1180
      ||||||||||||||||||||||||||||||||||
seq2  GAGAGGTTAAGAAGAGTAGGCAAAAGCTGAATTC  1167

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information