BAC Information

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BAC

Clone NameB6Ng01-258P01
Chromosome6 (Build37)
Map Location 17,960,056 - 17,961,252
singlet/doubletsinglet
Overlap geneWnt2
Upstream geneTes, EG232599, Cav2, Cav1, Met, Capza2, St7
Downstream geneAsz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7, LOC626180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258P01.bB6Ng01-258P01.g
ACCGA064250GA064251
length1,178758
definitionB6Ng01-258P01.b B6Ng01-258P01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaaattcgagggtatctggggggtgtgcgtaggcaaaaggaac
ggtgagtcccttggtgatattctccaaagtgctatctgagcaaaattctc
agaatttctctttctaagaaattgaaagtgggagtttcaactatgctctg
cattctcctgaggttctgctatatcgatgccacatgaagtttagaggcgg
cggacagaaaggtagctgaaactatgctgcttgaagcgcaagtctcaacc
accacacactgcctctcacaggtacacagagtttccagctgcctctccct
gaagacctcaccatggtcttttgccctaatgcttgacgtgactttgtttc
ttgtacaggcttgctacctgaccaagaaatggtagacttggatgaacaga
aaggattttcattccaggagtcagcctcaatttattcattagcctggaca
tgtgtcaaaagcactcaagggctaagagaacaacacttccaggcaaggta
tcacaatagccctaggttgtttggttatgtggcttgattgctgtcttcca
acgtggagcattgacctctatgtggtgtgccccactctgccaggtagagg
cgcagtagaatgtgccccggtatagctgggatcagtccttcgtattatga
gccagtatggaagatcaagataaaggactgcattctccacattttgggga
cctacatctgtaaaagacatcataatgagaattttctctctggaatcacc
ctttttctatgccttttatattctcggtgttgggtattaggttcactgga
ccatccagttgtacactttgctgcaaacaaactccgggatattttctagg
ctctctgagtttatcgaaaagcttctctaagatctgataacatcatgcat
gcacgcacagccccctccatgccaagctctttctgttcctcctgaaatcc
tcttgcagtcagctattcacttgtaagctgcactcctagatctaaaaata
acagagacatcattgcctgccttgttatgctaagtttcagtgacaactca
agctgatatttttatatgattagtgggagatgtgcatataagttggatct
aaaaatacacctaagccatcctaggtcgttgccagcgatgctgtgtgatc
tgtgtaggcacaatacccttccccttag
gaattctttgtattagtcaactgcacagaagttatttagattgataagat
tcaggttttagtcatttatttgcagagtattgatacatgcttggaagaat
taaatatcacctaggcagatagaaatattaaaaatcacaattgaaataaa
aactaattcctagccagacattcattattcttatcttttgtttccttcct
tcctttctttcctcctttctctctctctctctctctctctctctctctct
ctctctctctctctctctctgtgtgtgtgtgtgtgtatataaaagagaga
gagacactctccttcctctctcccttttatttatataaaccaaaaaaaaa
aaaggggggggggagggagagctctctcaaacactctctttgtttcttga
tctgtgtcacaaatatatgtgagtgcggacggggagacacacagagaatc
catcaagaaaaaaacaaactcttacagacataaaaagagagagagcactc
tcactcgcagagagagagagagagatttttctctgcgcgcacgcgagggg
actgtcacacgcacgctctcttgatgtaggacacaccatctagatatata
tctagatatcgagagagagagtcacacacacacacctcagagagacacat
ctctatcacacactgcacacgcacgcgtctcaggacacgtaagagagaaa
gaagagagtgcgcacgtgtgtgtgctgtcgcgtcgcgcgcacgcacgact
gagtgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_17960056_17961252
seq2: B6Ng01-258P01.b_45_1221

seq1  GAATTCCCAAATTCGAGGGTATCTGGGGGGTGTGCGTAGGCAAAAGGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAATTCGAGGGTATCTGGGGGGTGTGCGTAGGCAAAAGGAAC  50

seq1  GGTGAGTCCCTTGGTGATATTCTCCAAAGTGCTATCTGAGCAAAATTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTCCCTTGGTGATATTCTCCAAAGTGCTATCTGAGCAAAATTCTC  100

seq1  AGAATTTCTCTTTCTAAGAAATTGAAAGTGGGAGTTTCAACTATGCTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTCTCTTTCTAAGAAATTGAAAGTGGGAGTTTCAACTATGCTCTG  150

seq1  CATTCTCCTGAGGTTCTGCTATATCGATGCCACATGAAGTTTAGAGGCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCCTGAGGTTCTGCTATATCGATGCCACATGAAGTTTAGAGGCGG  200

seq1  CGGACAGAAAGGTAGCTGAAACTATGCTGCTTGAAGCGCAAGTCTCAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACAGAAAGGTAGCTGAAACTATGCTGCTTGAAGCGCAAGTCTCAACC  250

seq1  ACCACACACTGCCTCTCACAGGTACACAGAGTTTCCAGCTGCCTCTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACACTGCCTCTCACAGGTACACAGAGTTTCCAGCTGCCTCTCCCT  300

seq1  GAAGACCTCACCATGGTCTTTTGCCCTAATGCTTGACGTGACTTTGTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACCTCACCATGGTCTTTTGCCCTAATGCTTGACGTGACTTTGTTTC  350

seq1  TTGTACAGGCTTGCTACCTGACCAAGAAATGGTAGACTTGGATGAACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAGGCTTGCTACCTGACCAAGAAATGGTAGACTTGGATGAACAGA  400

seq1  AAGGATTTTCATTCCAGGAGTCAGCCTCAATTTATTCATTAGCCTGGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTTTCATTCCAGGAGTCAGCCTCAATTTATTCATTAGCCTGGACA  450

seq1  TGTGTCAAAAGCACTCAAGGGCTAAGAGAACAACACTTCCAGGCAAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAAAAGCACTCAAGGGCTAAGAGAACAACACTTCCAGGCAAGGTA  500

seq1  TCACAATAGCCCTAGGTTGTTTGGTTATGTGGCTTGATTGCTGTCTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATAGCCCTAGGTTGTTTGGTTATGTGGCTTGATTGCTGTCTTCCA  550

seq1  ACGTGGAGCATTGACCTCTATGTGGTGTGCCCCACTCTGCCAGGTAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGAGCATTGACCTCTATGTGGTGTGCCCCACTCTGCCAGGTAGAGG  600

seq1  CGCAGTAGAATGTGCCCCGGTATAGCTGGGATCAGTCCTTCGTATTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGTAGAATGTGCCCCGGTATAGCTGGGATCAGTCCTTCGTATTATGA  650

seq1  GCCAGTATGGAAGATCAAGATAAAGGACTGCATTCTCCACATTTTGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTATGGAAGATCAAGATAAAGGACTGCATTCTCCACATTTTGGGGA  700

seq1  CCTACATCTGTAAAAGACATCATAATGAGAATTTTCTCTCTGGAATCACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATCTGTAAAAGACATCATAATGAGAATTTTCTCTCTGGAATCACC  750

seq1  CTTTTTCTATGCCTTTTATATTCTCGGTGTTGGGTATTAGGTTCACTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTATGCCTTTTATATTCTCGGTGTTGGGTATTAGGTTCACTGGA  800

seq1  CCATCCAGTTGTACACTTTGCTGCAAACAAACTCCGGGATATTTTCTAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGTTGTACACTTTGCTGCAAACAAACTCCGGGATATTTTCTAGG  850

seq1  CTCTCTGAGTTTATCGAAAAGCTTCTCTAAGATCTGATAACATCATGCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAGTTTATCGAAAAGCTTCTCTAAGATCTGATAACATCATGCAT  900

seq1  GCACGCACAGCCCCCTCCATGCCAAGCTCTTTCTGTTCCTCCTGAAATCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCACAGCCCCCTCCATGCCAAGCTCTTTCTGTTCCTCCTGAAATCC  950

seq1  TCTTGCAGTCAGGCTATTCACTTGTAAGCTGCACTCCTAGATCTAAAAAT  1000
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCAGTCA-GCTATTCACTTGTAAGCTGCACTCCTAGATCTAAAAAT  999

seq1  AACAGGAGACATCATTGCCCTGCCTTTGTTATGCTAAGTTTCCAGGTGAC  1050
      |||| |||||||||||| |||||| |||||||||||||||||   |||||
seq2  AACA-GAGACATCATTG-CCTGCC-TTGTTATGCTAAGTTTC--AGTGAC  1044

seq1  AAACTTCAAAGCTGATATTTTTATATGATTAGTGGGAAGATGTGCATATT  1100
       ||||   |||||||||||||||||||||||||||| ||||||||||| |
seq2  -AACT--CAAGCTGATATTTTTATATGATTAGTGGG-AGATGTGCATA-T  1089

seq1  AAGTTTGGATCTTAAAAATACACCTAAGCAATTCTTAGGAGCCCGGTGGC  1150
      ||| ||||||| ||||||||||||||||| || ||    ||  || || |
seq2  AAG-TTGGATC-TAAAAATACACCTAAGCCATCCT----AGGTCGTTGCC  1133

seq1  AGGGCCAGATGCTGTTGTTGATCTGTGTAGGCACATTACC---TCCCTTA  1197
      ||     ||||||||   ||||||||||||||||| ||||    ||||||
seq2  AG----CGATGCTGT--GTGATCTGTGTAGGCACAATACCCTTCCCCTTA  1177