BAC Information

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BAC

Clone NameB6Ng01-261M14
Chromosome6 (Build37)
Map Location 140,500,321 - 140,501,484
singlet/doubletsinglet
Overlap genePlekha5
Upstream geneLOC100043898, Pik3c2g, Plcz1, Capza3, LOC100042680, LOC100039020, LOC269810
Downstream geneAebp2, EG664868, LOC664875, Pde3a, Slco1c1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261M14.bB6Ng01-261M14.g
ACCGA066369GA066370
length9891,166
definitionB6Ng01-261M14.b B6Ng01-261M14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattcagcaagattgtaaaagctaagtcactcccttacacaggaattt
accatcactaaggaagaaggaagtttcagaccaaaggagaaaccagaata
gatactatagcagagttacacccatacacatgtatttacaatggcctaag
gggaaggtggactatacaagagactaaaataggaactatggcaaggacag
gaagcccttgaccctggcttctaagattagtgaattttaggtggagccct
tgttgatcccagctgttatcaatgtattctatcctgggtggttcccgtta
gaccttttgtgtttgcattcctctgttttatgtaagattccagttacctc
aattgtaccttgcaaatatgtcacccaacttccttattgtcctctgcata
aaaagtctgatgctcgagttgtaaaattacactcagattccacacaaact
ctcctgtgtgtgtgtgtctgtttgtcgctcatccacgctttgcccacccg
cgtcgagagaccccgttccactcagacacagggacccagaaggtctgcag
cacttaatgacatttgtagcctgtgtatgcatgttcacatgtgtgtggat
gcatgtgtgtgcaatgagtgtgtgtctgggtggaggcccatgatcactga
ttttgctcgtctaccgagccagcttgatctggggaatcccaccatctctg
cctctgaagcgctaggattacaggcaactgccatgtatgccagcttctca
aatgacccatggggactcacactcctgtctgcattcttgcaccatggaca
agtcacgtcctgaaccctggatgaatcgctgttaagagtatgctgtggtg
gggctggagagatggctccgtggtgaaggaacacttgctgcttctcagga
agacctgaggtcagatccctgcaggatgtcaggaggttccaaccaccgtg
agtcccgttcctctgccagcaccttttctggccttctgg
aaacgatcttggaaaccacgtttgcagactggatttgacgcttttcagga
ctgaaggagtgatgtcatattaacaaacgtgatctttcagtgttctgtac
ggaaacatctcaacttggagaacatcacatgacttgctgagccagtgctt
tgcaggtgacctctttcattaccagattgcatacagccaccaggttaagg
tgtggtagactagaggacgttagctcccaggaagctctaaaagaaatgcc
actttattttgagcttagctacagatgggagatgactatctccaccaccc
agatgagctactcactgtccccaccctcagcagctcccagatgccaggtg
ggtttggtaatacgctctcactaaaggcctgtcatgagagactgaacata
aaagcaggcatgaaaaaacagccaaatagtaaaatccgtgaaactttgaa
cctatgacactcccctcgctaaattttctctaaagactctgaagccagac
cagtgagatggttcagtaggtaaggatgtagctgtgtcagcctagtgacc
tgaggtcaatctccagagcccacctctggagtagagtaagtaaagtagag
ggaggacagaacgagtgctacagagtcatcctctgacttccacatatgtg
ctgtgcacacacacacacacacacacacacactcatactcatacgtgtcc
tgagaacaagcagtttgcatgctgttgaccagtcttcatagaattagcat
ctatattttagccaagtaaataatgttaatatttctctcataaaaactaa
tgacaattttaattagtattccataatgtaaatttaagattatttcatca
ataataatgacaccaccacccccaaaaaccaagctcacctctgaatttct
ctttctttcccccccagcatgtctatgtagctgacaagaatgtcaatgcc
agctggcttaacttttacaggctgttagtcccagagcctcctaggcagaa
cggtggagtgtgatgactttactttatcatatgcttgcctttatttgctg
ccagaaaagacatgaagctgacatagtttttaaggtgtgaatttcagaga
cattcactacggaaaaacagattgccttgtcacaagatcacatgaaaaga
aggatagaacttctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_140500321_140501484
seq2: B6Ng01-261M14.g_80_1245

seq1  AAACGATCTTGGAAACCACGTTTGCAGACTGGATTTGACGCTTTTCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGATCTTGGAAACCACGTTTGCAGACTGGATTTGACGCTTTTCAGGA  50

seq1  CTGAAGGAGTGATGTCATATTAACAAACGTGATCTTTCAGTGTTCTGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGTGATGTCATATTAACAAACGTGATCTTTCAGTGTTCTGTAC  100

seq1  GGAAACATCTCAACTTGGAGAACATCACATGACTTGCTGAGCCAGTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACATCTCAACTTGGAGAACATCACATGACTTGCTGAGCCAGTGCTT  150

seq1  TGCAGGTGACCTCTTTCATTACCAGATTGCATACAGCCACCAGGTTAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGACCTCTTTCATTACCAGATTGCATACAGCCACCAGGTTAAGG  200

seq1  TGTGGTAGACTAGAGGACGTTAGCTCCCAGGAAGCTCTAAAAGAAATGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTAGACTAGAGGACGTTAGCTCCCAGGAAGCTCTAAAAGAAATGCC  250

seq1  ACTTTATTTTGAGCTTAGCTACAGATGGGAGATGACTATCTCCACCACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTTTGAGCTTAGCTACAGATGGGAGATGACTATCTCCACCACCC  300

seq1  AGATGAGCTACTCACTGTCCCCACCCTCAGCAGCTCCCAGATGCCAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCTACTCACTGTCCCCACCCTCAGCAGCTCCCAGATGCCAGGTG  350

seq1  GGTTTGGTAATACGCTCTCACTAAAGGCCTGTCATGAGAGACTGAACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGTAATACGCTCTCACTAAAGGCCTGTCATGAGAGACTGAACATA  400

seq1  AAAGCAGGCATGAAAAAACAGCCAAATAGTAAAATCCGTGAAACTTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGCATGAAAAAACAGCCAAATAGTAAAATCCGTGAAACTTTGAA  450

seq1  CCTATGACACTCCCCTCGCTAAATTTTCTCTAAAGACTCTGAAGCCAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGACACTCCCCTCGCTAAATTTTCTCTAAAGACTCTGAAGCCAGAC  500

seq1  CAGTGAGATGGTTCAGTAGGTAAGGATGTAGCTGTGTCAGCCTAGTGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGATGGTTCAGTAGGTAAGGATGTAGCTGTGTCAGCCTAGTGACC  550

seq1  TGAGGTCAATCTCCAGAGCCCACCTCTGGAGTAGAGTAAGTAAAGTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCAATCTCCAGAGCCCACCTCTGGAGTAGAGTAAGTAAAGTAGAG  600

seq1  GGAGGACAGAACGAGTGCTACAGAGTCATCCTCTGACTTCCACATATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACAGAACGAGTGCTACAGAGTCATCCTCTGACTTCCACATATGTG  650

seq1  CTGTGCACACACACACACACACACACACACACTCATACTCATACGTGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCACACACACACACACACACACACACACTCATACTCATACGTGTCC  700

seq1  TGAGAACAAGCAGTTTGCATGCTGTTGACCAGTCTTCATAGAATTAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACAAGCAGTTTGCATGCTGTTGACCAGTCTTCATAGAATTAGCAT  750

seq1  CTATATTTTAGCCAAGTAAATAATGTTAATATTTCTCTCATAAAAACTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTTAGCCAAGTAAATAATGTTAATATTTCTCTCATAAAAACTAA  800

seq1  TGACAATTTTAATTAGTATTCCATAATGTAAATTTAAGATTA-TTCATCA  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGACAATTTTAATTAGTATTCCATAATGTAAATTTAAGATTATTTCATCA  850

seq1  ATAATAATGACACCACCACCCCCAAAAACCAAAGCTCACCTCTGAA-TTC  898
      |||||||||||||||||||||||||||||| ||||||||||||||| |||
seq2  ATAATAATGACACCACCACCCCCAAAAACC-AAGCTCACCTCTGAATTTC  899

seq1  TC-TTCTTTCCCCCCCAGCATGTCTATGTAGCTGAC-AGAAGGTCAATGC  946
      || ||||||||||||||||||||||||||||||||| |||| ||||||||
seq2  TCTTTCTTTCCCCCCCAGCATGTCTATGTAGCTGACAAGAATGTCAATGC  949

seq1  CAGCTGGCTTAAC-TTTACAGGCTGTTAGTCCCCAGAGCCTCCAAGGCAG  995
      ||||||||||||| |||||||||||||||| |||||||||||| ||||||
seq2  CAGCTGGCTTAACTTTTACAGGCTGTTAGT-CCCAGAGCCTCCTAGGCAG  998

seq1  AACGGT-GAGTGTGATGACTTTAC-TTATCATATGCTTG-CTTTATTTGC  1042
      |||||| ||||||||||||||||| |||||||||||||| ||||||||||
seq2  AACGGTGGAGTGTGATGACTTTACTTTATCATATGCTTGCCTTTATTTGC  1048

seq1  TGCCCAGAAAGACATGAAGCTGACATAGTTTTTAA-GTGTGAATTTTCAG  1091
      ||||   |||||||||||||||||||||||||||| ||||||| ||||||
seq2  TGCCAGAAAAGACATGAAGCTGACATAGTTTTTAAGGTGTGAA-TTTCAG  1097

seq1  AGACATCACCTACAGAAAAAAACAATATTGCTTTGTAACAAAGATTCAAC  1141
      ||||||   |||| ||||||    | ||||| |||| || |||||   ||
seq2  AGACATTCACTACGGAAAAA---CAGATTGCCTTGTCAC-AAGAT--CAC  1141

seq1  ATGAAAAGAAGG-TAG-ACTTCTGT  1164
      |||||||||||| ||| ||||||||
seq2  ATGAAAAGAAGGATAGAACTTCTGT  1166