BAC Information

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BAC

Clone NameB6Ng01-262L07
Chromosome6 (Build37)
Map Location 136,071,354 - 136,251,920
singlet/doubletdoublet
Overlap geneGrin2b
Upstream geneLOC100043668, Hebp1, 8430419L09Rik, Gsg1, Pbp2, LOC100043890, Emp1
Downstream geneEG668137, LOC545887, E330021D16Rik, EG627022, LOC100043893, Atf7ip, 1100001H23Rik, LOC100043894, Gucy2c, Hist4h4, H2afj, Wbp11, BC049715, C030030A07Rik, Art4, Mgp, Erp27, Arhgdib, Pde6h, Rerg, Ptpro
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262L07.bB6Ng01-262L07.g
ACCGA067050GA067051
length378922
definitionB6Ng01-262L07.b B6Ng01-262L07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,071,354 - 136,071,731)(136,250,999 - 136,251,920)
sequence
ttcccatatatctgcaaacggtatgctcatcagcccctgctccactgggc
ccttgtgagtgggccgttacatccttgccagaccctggctacaacactga
caaagacccgaaaaaatgaatcccttacctggggcagacctttccatcat
ccactcatctgaatgggactgctatatgccacttttattggtcattacgc
aaactacagagcccacagattagaactaacaaagtgatttcatttctagc
aacttatctgttggatcacccatgacacactagatgtcaactggctatag
cctcacctgaatgtccttgtgcttacagttctaacctggctccactgctg
accttacttcctcaaggccacagtgagg
gaattctccccacaggtttcattcaagggccattttctagcagcattagc
tggtattaatcttgtgctctcctaggagcatctgggctgtactcgtgcgt
gttcccagaacaaataaatcatcaacaatgtaaacacgttactcagaaca
tgtgcctggagatccctttctatagcatggagtacacatgtgtcttcata
ccggagactctaacaatgccccccacccacctctcccataccctatcaaa
gatgcgcactgctgttgggacagacaaatcacagagggtcactgggataa
aataccaggatcaaagccaacttatggaagaagggttttactttggattc
tggttccagagggatgagagccggccatgctagggaagcatgctagtaag
gggcagacatagtgtcaggagagggaagctaagagcccacatccccaact
gcaagcggaggcagagagagtaatccagaaacggtgtgagacaatacgct
gtcaaagcccacttccactaacacacttgctccagcaaggttgcactacc
caaacctccctaaacagtgccaccaactgggttctgagtattcagatccc
caagcctgcaggagacatttcccattccaatcaccacaagtaaaatcagt
taaaaaaaaaaaaaaagaacaaaaaaacttcctagacactctggcagaag
agaggcacaggtcagcgtaaggcaagggttgatttttctctgaggaagga
ggcacggttttagccttcagggagcactgaattccgtgcaacaagacaga
tgaggtctcaggtacaaaagtatagccagaattgagacagtactgaggat
gaaaaatgacattgtggcagcagtctccctgaggatgtaaaggccataat
ggttgctggaggggggggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_136071354_136071731
seq2: B6Ng01-262L07.b_50_427

seq1  TTCCCATATATCTGCAAACGGTATGCTCATCAGCCCCTGCTCCACTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATATATCTGCAAACGGTATGCTCATCAGCCCCTGCTCCACTGGGC  50

seq1  CCTTGTGAGTGGGCCGTTACATCCTTGCCAGACCCTGGCTACAACACTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGAGTGGGCCGTTACATCCTTGCCAGACCCTGGCTACAACACTGA  100

seq1  CAAAGACCCGAAAAAATGAATCCCTTACCTGGGGCAGACCTTTCCATCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCCGAAAAAATGAATCCCTTACCTGGGGCAGACCTTTCCATCAT  150

seq1  CCACTCATCTGAATGGGACTGCTATATGCCACTTTTATTGGTCATTACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCATCTGAATGGGACTGCTATATGCCACTTTTATTGGTCATTACGC  200

seq1  AAACTACAGAGCCCACAGATTAGAACTAACAAAGTGATTTCATTTCTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACAGAGCCCACAGATTAGAACTAACAAAGTGATTTCATTTCTAGC  250

seq1  AACTTATCTGTTGGATCACCCATGACACACTAGATGTCAACTGGCTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTATCTGTTGGATCACCCATGACACACTAGATGTCAACTGGCTATAG  300

seq1  CCTCACCTGAATGTCCTTGTGCTTACAGTTCTAACCTGGCTCCACTGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCTGAATGTCCTTGTGCTTACAGTTCTAACCTGGCTCCACTGCTG  350

seq1  ACCTTACTTCCTCAAGGCCACAGTGAGG  378
      ||||||||||||||||||||||||||||
seq2  ACCTTACTTCCTCAAGGCCACAGTGAGG  378

seq1: chr6_136250999_136251920
seq2: B6Ng01-262L07.g_66_987 (reverse)

seq1  CCTT-CCCCCCCTCCAGCAACCATTAATGGCCTTTACATCCTCAGGGAGA  49
      |||| |||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTTCCCCCCCCTCCAGCAACCATT-ATGGCCTTTACATCCTCAGGGAGA  49

seq1  CTGCTGCCACAATGTCATTTTTCATCCTCAGTACTGTCTCAATTCTGGCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCACAATGTCATTTTTCATCCTCAGTACTGTCTCAATTCTGGCT  99

seq1  ATACTTTTGTACCTGAGACCTCATCTGTCTTGTTGCACGGAATTCAGTGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTTGTACCTGAGACCTCATCTGTCTTGTTGCACGGAATTCAGTGC  149

seq1  TCCCTGAAGGCTAAAACCGTGCCTCCTTCCTCAGAGAAAAATCAACCCTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAAGGCTAAAACCGTGCCTCCTTCCTCAGAGAAAAATCAACCCTT  199

seq1  GCCTTACGCTGACCTGTGCCTCTCTTCTGCCAGAGTGTCTAGGAAGTTTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACGCTGACCTGTGCCTCTCTTCTGCCAGAGTGTCTAGGAAGTTTT  249

seq1  TTTGTTCTTTTTTTTTTTTTTTAACTGATTTTACTTGTGGTGATTGGAAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTCTTTTTTTTTTTTTTTAACTGATTTTACTTGTGGTGATTGGAAT  299

seq1  GGGAAATGTCTCCTGCAGGCTTGGGGATCTGAATACTCAGAACCCAGTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGTCTCCTGCAGGCTTGGGGATCTGAATACTCAGAACCCAGTTG  349

seq1  GTGGCACTGTTTAGGGAGGTTTGGGTAGTGCAACCTTGCTGGAGCAAGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACTGTTTAGGGAGGTTTGGGTAGTGCAACCTTGCTGGAGCAAGTG  399

seq1  TGTTAGTGGAAGTGGGCTTTGACAGCGTATTGTCTCACACCGTTTCTGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTGGAAGTGGGCTTTGACAGCGTATTGTCTCACACCGTTTCTGGA  449

seq1  TTACTCTCTCTGCCTCCGCTTGCAGTTGGGGATGTGGGCTCTTAGCTTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTCTCTGCCTCCGCTTGCAGTTGGGGATGTGGGCTCTTAGCTTCC  499

seq1  CTCTCCTGACACTATGTCTGCCCCTTACTAGCATGCTTCCCTAGCATGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTGACACTATGTCTGCCCCTTACTAGCATGCTTCCCTAGCATGGC  549

seq1  CGGCTCTCATCCCTCTGGAACCAGAATCCAAAGTAAAACCCTTCTTCCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCTCATCCCTCTGGAACCAGAATCCAAAGTAAAACCCTTCTTCCAT  599

seq1  AAGTTGGCTTTGATCCTGGTATTTTATCCCAGTGACCCTCTGTGATTTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGCTTTGATCCTGGTATTTTATCCCAGTGACCCTCTGTGATTTGT  649

seq1  CTGTCCCAACAGCAGTGCGCATCTTTGATAGGGTATGGGAGAGGTGGGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCAACAGCAGTGCGCATCTTTGATAGGGTATGGGAGAGGTGGGTG  699

seq1  GGGGGCATTGTTAGAGTCTCCGGTATGAAGACACATGTGTACTCCATGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCATTGTTAGAGTCTCCGGTATGAAGACACATGTGTACTCCATGCT  749

seq1  ATAGAAAGGGATCTCCAGGCACATGTTCTGAGTAACGTGTTTACATTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGGGATCTCCAGGCACATGTTCTGAGTAACGTGTTTACATTGTT  799

seq1  GATGATTTATTTGTTCTGGGAACACGCACGAGTACAGCCCAGATGCTCCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTATTTGTTCTGGGAACACGCACGAGTACAGCCCAGATGCTCCT  849

seq1  AGGAGAGCACAAGATTAATACCAGCTAATGCTGCTAGAAAATGGCCCTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGCACAAGATTAATACCAGCTAATGCTGCTAGAAAATGGCCCTTG  899

seq1  AATGAAACCTGTGGGGAGAATTC  922
      |||||||||||||||||||||||
seq2  AATGAAACCTGTGGGGAGAATTC  922