BAC Information

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BAC

Clone NameB6Ng01-267N05
Chromosome6 (Build37)
Map Location 123,764,606 - 123,765,317
singlet/doubletsinglet
Overlap geneEG243628
Upstream geneLOC100043505, Foxj2, C3ar1, Necap1, EG384482, Clec4a1, Clec4a3, Clec4a4, Clec4b1, Clec4a2, Clec4b2, Ppia-ps6_1344.1, Clec4n, Clec4d, Clec4e, EG232358, EG667180, LOC626436, EG546912, LOC100043511, Vmn2r-ps32, EG546913, LOC100043516, EG435916
Downstream geneEG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34, Vmn2r27, LOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5, Clstn3, C1rl, C1r, C1s, LOC667277, EG317677, Mboat5, Emg1, Phb2, Ptpn6, Grcc10, Atn1, Eno2, Lrrc23, Spsb2, Tpi1, Usp5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267N05.bB6Ng01-267N05.g
ACCGA070844GA070845
length9851,189
definitionB6Ng01-267N05.b B6Ng01-267N05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaggaaatatccctatgtatattcactgtaccataatattga
aaaacaaaaatgaataagttaatttttttcctgagagaaaaatacacata
tcccttttccataatatgttcagaagtgagtggacttcaatcagaaaaga
gaaaatcagaaatgtagaaatgatcttgactggaaatcacaacatgaaaa
ttatttttgacttcttatgaaagacaaagaaagttcattttgaagctttt
actattttcctttatgtttcctttgtttattaaaattgtttattacttta
gatcatcatatattcatatcatgagttttgatcaagtctaccaccaattt
cttccacctggtattcttagtctctgttgctccaacaattttttctccca
actttattttcttttttcccccactgggttcacttaatgctgcctgtata
catatcaatatagggccatctaccttgacatgggcagtagcacatttgaa
atcaaacaaagaaaaaactatctctctctttccatcagcaatgtgtggat
actagcttctagctaggagtcagagtttgtaatcctgttccccatccatg
ctgggattttgtctggcttgatctggtttgatctggtacttgcctctgtg
agtttaggtgctcatgaaccctgtcatttctgactaattctccttcctta
cagatatcctttctgtggctcttaagacctctttgacttctctactacag
tgatccttggtgctcttatccctgagagctcttgtttgttatcatgagag
gtaccaggagacatctaggagaagctaaactctatcagtaacctttttga
gatggtttcactgtggattttcaaatcaacgtggatttaccctaccaggt
aagactgaaggaattacatagcaggaaatctctgcttttcctgttttttg
cacacacactacccataaagacatacagacacaca
gaattctctgtttagctctgtccctaaagttttaaaaattagactggtgg
tttgtatatgactagtgtcttcagttctttatatattttggatattagct
ctctgtcatatttagagttgataaaaattattttccattccattgactgc
cattttgttctattgaaattgtcctttgcctttcagacgccttttggttt
catgaggtcccatgtattcattgccctatcaggaatctgtttatgaagtt
gtgtcctgtgctaatatgtgtaggattaaaataattaaataaaatttagc
agtccattctttattaccttccccaaattccagcttttcaaaagaaagac
acacactcaatctttatattttaatatgcctaaaatagctcaatggctga
gtcatttcctaacctctaagtggctaacccacctccctctgaaatcttga
attatcatttattacattttgtattttaccttgactgctctggatccagt
tgggcagcactattgggcagctctctcctacctcctacatggatgatgtg
gcccagtttcctgcaccttctcaggcctggcttctctttttctccacctc
tccaggcattgtagatttctttctcctagccagggaatcctataagtatc
acctctctcctctcccaagtcactggctgtcagcatctttatttacctaa
tcagatacaactaggggcaggttcccagaagctatgtgcagtagatgttc
tcacgtaaacacaattatggggaatgtaattagcattcatattacaagca
gttataaatatgttcaaaggctattctgtactttttcttcattctaattc
agtgtgtctattttaatgttgtgtttatcaattagccttgggttttgtag
agggtaattaaataagaaccttattagcgttcttcaacatgaagacatcc
agtaagaacagaaccatttttgaagagcttttctttttttcatgatgtat
ttcttgacttctttaataaaaaaaaaaaatggtgtctattagatgtgtgg
atttatgtctggtcttcgatcggattctatgctcaacatgtctcttttta
tgagaaattattgtgctttataactataacactgtgatactcaattagaa
tgtatacttctgtgattatttaacctgttatatagtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_123764606_123765317
seq2: B6Ng01-267N05.b_49_760 (reverse)

seq1  AAAGGATATCTGTAAGGAAGGAGAATTAGTCAGAAATGACAGGGTTCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATATCTGTAAGGAAGGAGAATTAGTCAGAAATGACAGGGTTCATG  50

seq1  AGCACCTAAACTCACAGAGGCAAGTACCAGATCAAACCAGATCAAGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTAAACTCACAGAGGCAAGTACCAGATCAAACCAGATCAAGCCAG  100

seq1  ACAAAATCCCAGCATGGATGGGGAACAGGATTACAAACTCTGACTCCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCCCAGCATGGATGGGGAACAGGATTACAAACTCTGACTCCTAG  150

seq1  CTAGAAGCTAGTATCCACACATTGCTGATGGAAAGAGAGAGATAGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGCTAGTATCCACACATTGCTGATGGAAAGAGAGAGATAGTTTTT  200

seq1  TCTTTGTTTGATTTCAAATGTGCTACTGCCCATGTCAAGGTAGATGGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTTTGATTTCAAATGTGCTACTGCCCATGTCAAGGTAGATGGCCC  250

seq1  TATATTGATATGTATACAGGCAGCATTAAGTGAACCCAGTGGGGGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGATATGTATACAGGCAGCATTAAGTGAACCCAGTGGGGGAAAAA  300

seq1  AGAAAATAAAGTTGGGAGAAAAAATTGTTGGAGCAACAGAGACTAAGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAAAGTTGGGAGAAAAAATTGTTGGAGCAACAGAGACTAAGAAT  350

seq1  ACCAGGTGGAAGAAATTGGTGGTAGACTTGATCAAAACTCATGATATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTGGAAGAAATTGGTGGTAGACTTGATCAAAACTCATGATATGAA  400

seq1  TATATGATGATCTAAAGTAATAAACAATTTTAATAAACAAAGGAAACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATGATCTAAAGTAATAAACAATTTTAATAAACAAAGGAAACATA  450

seq1  AAGGAAAATAGTAAAAGCTTCAAAATGAACTTTCTTTGTCTTTCATAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAATAGTAAAAGCTTCAAAATGAACTTTCTTTGTCTTTCATAAGA  500

seq1  AGTCAAAAATAATTTTCATGTTGTGATTTCCAGTCAAGATCATTTCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAAATAATTTTCATGTTGTGATTTCCAGTCAAGATCATTTCTACA  550

seq1  TTTCTGATTTTCTCTTTTCTGATTGAAGTCCACTCACTTCTGAACATATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATTTTCTCTTTTCTGATTGAAGTCCACTCACTTCTGAACATATT  600

seq1  ATGGAAAAGGGATATGTGTATTTTTCTCTCAGGAAAAAAATTAACTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAGGGATATGTGTATTTTTCTCTCAGGAAAAAAATTAACTTATT  650

seq1  CATTTTTGTTTTTCAATATTATGGTACAGTGAATATACATAGGGATATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGTTTTTCAATATTATGGTACAGTGAATATACATAGGGATATTT  700

seq1  CCTTGAGAATTC  712
      ||||||||||||
seq2  CCTTGAGAATTC  712