BAC Information

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BAC

Clone NameB6Ng01-268F18
Chromosome6 (Build37)
Map Location 132,085,695 - 132,086,873
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
Downstream genePrb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268F18.bB6Ng01-268F18.g
ACCGA071237GA071238
length7691,171
definitionB6Ng01-268F18.b B6Ng01-268F18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttatctctgtgccccctttttaataggattatttgaatt
tctggagtttagcttcttgagctctttttatatattggacaagagttccc
tattggattaaggcttagtaaggatcctttccaaatctgtttgtggcttt
tttgtcttattgacagtgtcttttgccttacagaaaattttcagttttat
gcggtcccatttatggagtctcaatcttacagaacaagccattgaaattc
tgttcaggaatttttcccctctgtccatatctttgaggcttttcccaact
ttctcctctataagtttcagtgtctctggttttatgtggtgtaccttggt
ccatttagacttgagctttctacaagtagataagaatggatcaattcaca
ctcttatacatgataaaagccagttgagtcagtaccttttgttctaaatg
ctgtcctttttccactggatgattttagctcccttgtcaaagatcaaatg
accataggtgtgtgggtttatttcttggtcttcaatctattccatagttc
tacatgtctgttgctgtaccagtatcatgaaagatgtagtcaaaattgct
ttatagaacaaactgaagatagtcatgttgattcctccaaaggtttgttt
gtttgtttgtttgtttgtttgttttgggttttgtttttaattgttgagaa
attgtttttgctatcttaggttgtttttttaattctgtttcagtctataa
attttaccatttcctaact
gaattcttaagattggcaatgattgcaaggaggatggggacaaagaacaa
cagagggataatccagactgtaccttgctcttgcaagcaaggaagagaac
acacacccagaggtcagattcccatttgctctgcagggatattcagggga
attatataacagcctcctcccaaaattagtcaaggtcatgagtcttaacc
tggtcaccatgaataaccaaactcaattaggattttcaaatccctaatct
agagtttcttgatggtggagaggaggaaaaaccatgaagaaaaccacaaa
ggaaaaaaaataacttacagatatgacacatatgatgaaagaggcaataa
caatcattatgtacaaaacaagggactctcaggtgcagctcagagacctt
atgcctggacggtgtactcaggaaagaaagggtgtttgggaaccattccc
tgataccaccacctcggaaaccagcccctatgttgtataccagaatgagt
tcagaccaaaagggaaaatgggcagacaaagacaaagaaagtagaaaaga
cagcttccacatatttatcacagcacactcttccaaagacaaagaagaac
aacaatggctactgtgcattggttttcgtgctaactgcattcttgctgca
tgttctccattgaaacaaactgagaccaaatgagtggttacagtgatgga
cagacagaaaagacaaaaaaagacagaaatgaggtctacacacttatctt
cataggacctatcacataaaacactaagggaacaattcacagaagaagca
gcatcataaagagaacacagaccaagtcaaaacatttgaaagttcctgta
gaaacatgcaaaaatgaaccccaagaagaggttttcaagcagccacaaaa
caatttcccttcctaaaatcccgtatcccctttcccttcttctcatgctt
ctaagaggatgttctcctactcaccttcccacccagtccttcctcatctc
cctagcattcccatatactggagcttcagcactcacaggaccaaagtctc
ccttcacatgatgccaagaataagcatctctgctacaatgaggatagaag
ctatatgtcctccatgtgcaatgttggttggatattatacagtcctggga
gaatccttgtatttgaaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132085695_132086873
seq2: B6Ng01-268F18.g_66_1236

seq1  GAATTCTTAAGATTGGCAATGATTGCAAGGAGGATGGGGACAAAGAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAGATTGGCAATGATTGCAAGGAGGATGGGGACAAAGAACAA  50

seq1  CAGAGGGATAATCCAGACTGTACCTTGCTCTTGCAAGCAAGGAAGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGGATAATCCAGACTGTACCTTGCTCTTGCAAGCAAGGAAGAGAAC  100

seq1  ACACACCCAGAGGTCAGATTCCCATTTGCTCTGCAGGGATATTCAGGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCAGAGGTCAGATTCCCATTTGCTCTGCAGGGATATTCAGGGGA  150

seq1  ATTATATAACAGCCTCCTCCCAAAATTAGTCAAGGTCATGAGTCTTAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATAACAGCCTCCTCCCAAAATTAGTCAAGGTCATGAGTCTTAACC  200

seq1  TGGTCACCATGAATAACCAAACTCAATTAGGATTTTCAAATCCCTAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACCATGAATAACCAAACTCAATTAGGATTTTCAAATCCCTAATCT  250

seq1  AGAGTTTCTTGATGGTGGAGAGGAGGAAAAACCATGAAGAAAACCACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTCTTGATGGTGGAGAGGAGGAAAAACCATGAAGAAAACCACAAA  300

seq1  GGAAAAAAAATAACTTACAGATATGACACATATGATGAAAGAGGCAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAAAATAACTTACAGATATGACACATATGATGAAAGAGGCAATAA  350

seq1  CAATCATTATGTACAAAACAAGGGACTCTCAGGTGCAGCTCAGAGACCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTATGTACAAAACAAGGGACTCTCAGGTGCAGCTCAGAGACCTT  400

seq1  ATGCCTGGACGGTGTACTCAGGAAAGAAAGGGTGTTTGGGAACCATTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGGACGGTGTACTCAGGAAAGAAAGGGTGTTTGGGAACCATTCCC  450

seq1  TGATACCACCACCTCGGAAACCAGCCCCTATGTTGTATACCAGAATGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCACCACCTCGGAAACCAGCCCCTATGTTGTATACCAGAATGAGT  500

seq1  TCAGACCAAAAGGGAAAATGGGCAGACAAAGACAAAGAAAGTAGAAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACCAAAAGGGAAAATGGGCAGACAAAGACAAAGAAAGTAGAAAAGA  550

seq1  CAGCTTCCACATATTTATCACAGCACACTCTTCCAAAGACAAAGAAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCCACATATTTATCACAGCACACTCTTCCAAAGACAAAGAAGAAC  600

seq1  AACAATGGCTACTGTGCATTGGTTTTCGTGCTAACTGCATTCTTGCTGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGGCTACTGTGCATTGGTTTTCGTGCTAACTGCATTCTTGCTGCA  650

seq1  TGTTCTCCATTGAAACAAACTGAGACCAAATGAGTGGTTACAGTGATGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCCATTGAAACAAACTGAGACCAAATGAGTGGTTACAGTGATGGA  700

seq1  CAGACAGAAAAGACAAAAAAAGACAGAAATGAGGTCTACACACTTATCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAAAAGACAAAAAAAGACAGAAATGAGGTCTACACACTTATCTT  750

seq1  CATAGGACCTATCACATAAAACACTAAGGGAACAATTCACAGAAGAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGACCTATCACATAAAACACTAAGGGAACAATTCACAGAAGAAGCA  800

seq1  GCATCATAAAGAGAACACAGACCAAGTCAAAACATTTGAAAGTTCCTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATAAAGAGAACACAGACCAAGTCAAAACATTTGAAAGTTCCTGTA  850

seq1  GAAACATGCAAAAATGAACCCCAAGAAGAGGTTTTCAAGCAGCCACAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATGCAAAAATGAACCCCAAGAAGAGGTTTTCAAGCAGCCACAAAA  900

seq1  CAATTTCCCTTCCTAAAATCCCGTATCCCCTTCCCCTTCTTCTCATGCTT  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAATTTCCCTTCCTAAAATCCCGTATCCCCTTTCCCTTCTTCTCATGCTT  950

seq1  CTAAGAGGATGTTCTCCTACTCACCTTCCCACCCAGTCCTTCCTCATCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGGATGTTCTCCTACTCACCTTCCCACCCAGTCCTTCCTCATCTC  1000

seq1  CCTAGCATTCCCATATACTGGAGCTTCAAGCACTCACAGGACCAAAGGTC  1050
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  CCTAGCATTCCCATATACTGGAGCTTC-AGCACTCACAGGACCAAA-GTC  1048

seq1  TCCCTTCACATTGATGCCA--GATAAGGCCATCCTCTGCTACAAATGAAG  1098
      |||||||||| ||||||||   |||||  ||| ||||||||| ||||| |
seq2  TCCCTTCACA-TGATGCCAAGAATAAG--CAT-CTCTGCTAC-AATGAGG  1093

seq1  ATAG-AGCTATATGTCCCTCCATGTGCATTGTTGGGTTGGTATATTATAC  1147
      |||| |||||||||| |||||||||||| |||| |||||| |||||||| 
seq2  ATAGAAGCTATATGT-CCTCCATGTGCAATGTT-GGTTGG-ATATTATA-  1139

seq1  CAATTCTGGGAGAATCTGGTTATTTGATATTG  1179
      || | |||||||||||    ||||||| ||||
seq2  CAGTCCTGGGAGAATCCTTGTATTTGAAATTG  1171