BAC Information

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BAC

Clone NameB6Ng01-271G10
Chromosome6 (Build37)
Map Location 17,875,913 - 17,877,040
singlet/doubletsinglet
Overlap geneSt7
Upstream geneEG435881, Tes, EG232599, Cav2, Cav1, Met, Capza2
Downstream geneWnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271G10.bB6Ng01-271G10.g
ACCGA073492GA073493
length1,1241,195
definitionB6Ng01-271G10.b B6Ng01-271G10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaccacaaatacatcagcatttcaaagctttctaaaatgttt
gattcatcactgtcccagcccccaaaattatacaatcaaagtccagataa
ttaaaaataaaagggaagagtttctactttaagcctttgtgtttcttgga
ctgttgcatgactgccaccatatcggaattatgtttgctttaaacactgc
tggccctggttctcctcacacatgcagcacaagctgaatgcaaagatcac
gtaagaatgaaagcaaggtctcatttccgctgagtttgcactggtaacca
ctttacgtggtctgttttcatcttctgttttacctatactgagtactcat
gcatcattatctcctcccaccttgaactctaaggctctccattggcagtg
tttattttagaatgcatggtttttgttgattgcaaccttgaactttaatt
ttcatgttctatacactagaagatgactatgccatggggtaaaccactta
gcttttctttgtgtctatgcttttccactcaagcaaatagaattctttat
tttctttgtggagcccccaccccaagaatccactaaataatgtataagat
ctgaaggtggtgtttctgagggagctaagcagagggtttccactgagaag
ggaaaatggcccattgttgaagcctaggataagattatgattctaattta
ttctctttgaacctgatgtcaaatgctcttcgctgtgagatgtggttctt
agggcacttcctctagttaagccttccctcaataaggctggaagcactgg
gactcctaactgacccctgcccctactcctaacagatctaaggatgcatt
ttatgatttgaaagaaagcagccattggataaagaccctggtcagagctg
acccactgttatggcatgagagtcaggcccttcctgtgtttccaaggctg
gcctcaaacatgcaggttacagtgattttcctgctctagtctttagatag
tgcacaggcttgttcctgtaaccttagctttacttaagttctgaaagaaa
tgctgtctctagtgcatataattcattgaagaaaacgttaactggatctt
tccctgtagccagcctttatgttt
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaagtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagtctattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctttccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttgat
taggattttgtccctttgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttgttgtttccacttggttaatttcacccctgagtttgattat
ttccctgccgtctactcctcttgggtgaatttgcttcctttttttctaga
gcttttagattgtgttgtcaagctgctagtatgtgctctctcccgtttct
ttttggaggtactcagagctatgagtttctttccctctagaaatgccttt
tcattgtgtccaaagtttgggtacgttgtggctccattttcattaacttc
taaaaagtctttaatttctttccttaatcttcccttgacaaggtatcatt
tgacaggagtgtgtgttcagctcccacgtgacgtttgacctgcagtatct
acgtgtggtaatcgagaactccatgtcttatagcgccacgtatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_17875913_17877040
seq2: B6Ng01-271G10.b_41_1164

seq1  GAATTCTCAACCACAAATACATCAGCATTTCAAAGCTTTCTAAAATGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACCACAAATACATCAGCATTTCAAAGCTTTCTAAAATGTTT  50

seq1  GATTCATCACTGTCCCAGCCCCCAAAATTATACAATCAAAGTCCAGATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCATCACTGTCCCAGCCCCCAAAATTATACAATCAAAGTCCAGATAA  100

seq1  TTAAAAATAAAAGGGAAGAGTTTCTACTTTAAGCCTTTGTGTTTCTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATAAAAGGGAAGAGTTTCTACTTTAAGCCTTTGTGTTTCTTGGA  150

seq1  CTGTTGCATGACTGCCACCATATCGGAATTATGTTTGCTTTAAACACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCATGACTGCCACCATATCGGAATTATGTTTGCTTTAAACACTGC  200

seq1  TGGCCCTGGTTCTCCTCACACATGCAGCACAAGCTGAATGCAAAGATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCTGGTTCTCCTCACACATGCAGCACAAGCTGAATGCAAAGATCAC  250

seq1  GTAAGAATGAAAGCAAGGTCTCATTTCCGCTGAGTTTGCACTGGTAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAATGAAAGCAAGGTCTCATTTCCGCTGAGTTTGCACTGGTAACCA  300

seq1  CTTTACGTGGTCTGTTTTCATCTTCTGTTTTACCTATACTGAGTACTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACGTGGTCTGTTTTCATCTTCTGTTTTACCTATACTGAGTACTCAT  350

seq1  GCATCATTATCTCCTCCCACCTTGAACTCTAAGGCTCTCCATTGGCAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTATCTCCTCCCACCTTGAACTCTAAGGCTCTCCATTGGCAGTG  400

seq1  TTTATTTTAGAATGCATGGTTTTTGTTGATTGCAACCTTGAACTTTAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTAGAATGCATGGTTTTTGTTGATTGCAACCTTGAACTTTAATT  450

seq1  TTCATGTTCTATACACTAGAAGATGACTATGCCATGGGGTAAACCACTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTCTATACACTAGAAGATGACTATGCCATGGGGTAAACCACTTA  500

seq1  GCTTTTCTTTGTGTCTATGCTTTTCCACTCAAGCAAATAGAATTCTTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTTTGTGTCTATGCTTTTCCACTCAAGCAAATAGAATTCTTTAT  550

seq1  TTTCTTTGTGGAGCCCCCACCCCAAGAATCCACTAAATAATGTATAAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTGTGGAGCCCCCACCCCAAGAATCCACTAAATAATGTATAAGAT  600

seq1  CTGAAGGTGGTGTTTCTGAGGGAGCTAAGCAGAGGGTTTCCACTGAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGTGGTGTTTCTGAGGGAGCTAAGCAGAGGGTTTCCACTGAGAAG  650

seq1  GGAAAATGGCCCATTGTTGAAGCCTAGGATAAGATTATGATTCTAATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATGGCCCATTGTTGAAGCCTAGGATAAGATTATGATTCTAATTTA  700

seq1  TTCTCTTTGAACCTGATGTCAAATGCTCTTCGCTGTGAGATGTGGTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTGAACCTGATGTCAAATGCTCTTCGCTGTGAGATGTGGTTCTT  750

seq1  AGGGCACTTCCTCTAGTTAAGCCTTCCCTCAATAAGGCTGGAAGCACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACTTCCTCTAGTTAAGCCTTCCCTCAATAAGGCTGGAAGCACTGG  800

seq1  GACTCCTAACTGACCCCTGCCCCTACTCCTAACAGATCTAAGGATGCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCTAACTGACCCCTGCCCCTACTCCTAACAGATCTAAGGATGCATT  850

seq1  TTATGATTTGAAAGAAAGCAGCCATTGGATAAAGACCCTGGTCAGAGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATTTGAAAGAAAGCAGCCATTGGATAAAGACCCTGGTCAGAGCTG  900

seq1  ACCCACTGTTATGGCATGAGAGTCAGGGCCTTCCTGTGTTTCCAAGGCTG  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACCCACTGTTATGGCATGAGAGTCAGGCCCTTCCTGTGTTTCCAAGGCTG  950

seq1  GCCTCAAACATGCAGGTTACAGTGATTTTCCTGCTCTAGTCTTTAGAATA  1000
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCCTCAAACATGCAGGTTACAGTGATTTTCCTGCTCTAGTCTTTAG-ATA  999

seq1  GTGCAACAGGCTTGTTCCTGTAACCTTAGCTTTACTTAAGTTCTGAAAGA  1050
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGC-ACAGGCTTGTTCCTGTAACCTTAGCTTTACTTAAGTTCTGAAAGA  1048

seq1  AATGCTGTCTTCCTAGTTGCATATAATTCATTG-AGAAAACGTTTACTGA  1099
      ||||||||||  |||| |||||||||||||||| |||||||||| |||| 
seq2  AATGCTGTCT--CTAG-TGCATATAATTCATTGAAGAAAACGTTAACTGG  1095

seq1  ATCCTTCCCCTGTAG-CAGGCTTTATGTTT  1128
      || ||| |||||||| ||| ||||||||||
seq2  AT-CTTTCCCTGTAGCCAGCCTTTATGTTT  1124