BAC Information

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BAC

Clone NameB6Ng01-273E22
Chromosome6 (Build37)
Map Location 75,547,189 - 75,661,112
singlet/doubletdoublet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273E22.bB6Ng01-273E22.g
ACCGA074915GA074916
length1,1141,002
definitionB6Ng01-273E22.b B6Ng01-273E22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,547,189 - 75,548,302)(75,660,106 - 75,661,112)
sequence
gaattccatgaagtaggaccaaatacacacgatttctaaaatgatctctt
cctgcttgaactcatggcctccagagaaaccacctatgatcagtcagcag
aggaacagaaaactcgggtctagtagtcagaaagcattctgtggagtaca
ggcacttttaaaactgtccagctactgctcttttcagggatatatctgaa
aaacgtgggtaaggtaaaatgttcctctggacataattctgagtaatttg
cttggttgctcacattttaaagatacaaatagatatgggattacatatca
atcatacaagatatgaacaaatgttaggatatatgatgagggacatggaa
atgacataattataaaaatagtgagaaataaatccagaaaataatttgaa
acctaatctactagagtaggtgaaaattaatattgataaccaaggaatcc
aggcatggtagcacacaccttgaatcccagcacttggagacagaggagca
catctctgtaaatttgaggccagcctggtctgcaaagaaagttctatcaa
acaatagcttcaaaaggatgaatttagtaatcaacagataaaatgaacaa
tttttttaagaatagaagtctttcattttttcagtcaacaccattatttt
ccataaagactatgaataaatagctatggatacaggtatgaagattactc
agggtcacagcaacataaactcccaacaatcatcttctactccattaaga
tcacagtggaatatttaataagtatcaacataacatatattcacaccagc
ttctgctgtagtaaattacctgggatcatcaagacacctgatgtcatctt
aactatattgggcagcttccatcttagatgaattgacataggcttctagg
aatatatgtacctttctttatttcacacatctgtcaaaagtataaattca
cttgcttaatgtcttgcctactgtcttgataccctaacagaacatgcttc
tgatcaagtggcctagttccacaacccatcaatcccaaacacattttcca
acatcttgataaacagtcaatgcccatttttggcatatcagtatagtatc
taatagattttttt

gaattcatttttcaaattctggacttttttttaccaattgaatcaatcct
aaatttgttgttccttgagcaacactcaggcatttattctcttgacatta
agttattttacgttcattgaggtttttgtttgtttgttttgtttttcctt
taaatttcttgagttttttaaatgaactttatgatttcttttgcaaattt
tgtggtacaatattttgtaccattttgtggtacaaatatgggaattttta
ttggcaagtctatcaatagtactggaggattttatttagaaagagaaaaa
taattaggtttttaatattgtttgtatttttataatgaaacattgttttg
tagacctctactctttaactgatatgaacaaagcaggctgaggtagaaca
aacaatatgaagactagattaagcctggaggttgaatgaagttgggtgga
ctgagaaggtgtgtaccccaaaacaatttgatgctcattagaaacacctt
agatacctctaatggacaaaaagcaaaaggtaaaataaggattatcactg
caaaataagtgataaataggtataattttatcatagaatacactctggtg
tgaaaaaagacaaaatagaatctaaacaaaaactttcatcatatagaaat
aaagatctgaattcacaaagcagattaattaagatgaatacttgtgtgcc
caacatttggatgaggaaggcaagttttactaggagagtagagtcataaa
tattagcatgttgataacagattccagaagcccacttctaatgtaaatta
tctgtatgctaaatcaatgaaaacatattgacctttaaactatattgtag
acacatgatacgatttcatctaaaagcaaaataatcagaaattctgtata
aaggaatgacaaaaagaagatagtatcttcaagataaatatatttatata
atatatttatataatacttaaataataaaacagctataattaattaatat
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75547189_75548302
seq2: B6Ng01-273E22.b_42_1155

seq1  GAATTCCATGAAGTAGGACCAAATACACACGATTTCTAAAATGATCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAAGTAGGACCAAATACACACGATTTCTAAAATGATCTCTT  50

seq1  CCTGCTTGAACTCATGGCCTCCAGAGAAACCACCTATGATCAGTCAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTTGAACTCATGGCCTCCAGAGAAACCACCTATGATCAGTCAGCAG  100

seq1  AGGAACAGAAAACTCGGGTCTAGTAGTCAGAAAGCATTCTGTGGAGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGAAAACTCGGGTCTAGTAGTCAGAAAGCATTCTGTGGAGTACA  150

seq1  GGCACTTTTAAAACTGTCCAGCTACTGCTCTTTTCAGGGATATATCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTTTAAAACTGTCCAGCTACTGCTCTTTTCAGGGATATATCTGAA  200

seq1  AAACGTGGGTAAGGTAAAATGTTCCTCTGGACATAATTCTGAGTAATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGTGGGTAAGGTAAAATGTTCCTCTGGACATAATTCTGAGTAATTTG  250

seq1  CTTGGTTGCTCACATTTTAAAGATACAAATAGATATGGGATTACATATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTGCTCACATTTTAAAGATACAAATAGATATGGGATTACATATCA  300

seq1  ATCATACAAGATATGAACAAATGTTAGGATATATGATGAGGGACATGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACAAGATATGAACAAATGTTAGGATATATGATGAGGGACATGGAA  350

seq1  ATGACATAATTATAAAAATAGTGAGAAATAAATCCAGAAAATAATTTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATAATTATAAAAATAGTGAGAAATAAATCCAGAAAATAATTTGAA  400

seq1  ACCTAATCTACTAGAGTAGGTGAAAATTAATATTGATAACCAAGGAATCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATCTACTAGAGTAGGTGAAAATTAATATTGATAACCAAGGAATCC  450

seq1  AGGCATGGTAGCACACACCTTGAATCCCAGCACTTGGAGACAGAGGAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATGGTAGCACACACCTTGAATCCCAGCACTTGGAGACAGAGGAGCA  500

seq1  CATCTCTGTAAATTTGAGGCCAGCCTGGTCTGCAAAGAAAGTTCTATCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGTAAATTTGAGGCCAGCCTGGTCTGCAAAGAAAGTTCTATCAA  550

seq1  ACAATAGCTTCAAAAGGATGAATTTAGTAATCAACAGATAAAATGAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGCTTCAAAAGGATGAATTTAGTAATCAACAGATAAAATGAACAA  600

seq1  TTTTTTTAAGAATAGAAGTCTTTCATTTTTTCAGTCAACACCATTATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAGAATAGAAGTCTTTCATTTTTTCAGTCAACACCATTATTTT  650

seq1  CCATAAAGACTATGAATAAATAGCTATGGATACAGGTATGAAGATTACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAGACTATGAATAAATAGCTATGGATACAGGTATGAAGATTACTC  700

seq1  AGGGTCACAGCAACATAAACTCCCAACAATCATCTTCTACTCCATTAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCACAGCAACATAAACTCCCAACAATCATCTTCTACTCCATTAAGA  750

seq1  TCACAGTGGAATATTTAATAAGTATCAACATAACATATATTCACACCAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTGGAATATTTAATAAGTATCAACATAACATATATTCACACCAGC  800

seq1  TTCTGCTGTAGTAAATTACCTGGGATCATCAAGACACCTGATGTCATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGTAGTAAATTACCTGGGATCATCAAGACACCTGATGTCATCTT  850

seq1  AACTATATTGGGCAGCTTCCATCTTAGATGAATTGACATAGGCTTCTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATTGGGCAGCTTCCATCTTAGATGAATTGACATAGGCTTCTAGG  900

seq1  AATATATGTACCTTTCTTTATTTCACACATCTGTCAAAAGTATAAATTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGTACCTTTCTTTATTTCACACATCTGTCAAAAGTATAAATTCA  950

seq1  CTTGCTTAATGTCTTGCCTACTGTCTTGATACCCT-ACAGAACAATGCTT  999
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  CTTGCTTAATGTCTTGCCTACTGTCTTGATACCCTAACAGAAC-ATGCTT  999

seq1  CTGATCAAGTGGCCTAGTTCCACAACCCATCAAT-CCAAACACATTTTCC  1048
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGATCAAGTGGCCTAGTTCCACAACCCATCAATCCCAAACACATTTTCC  1049

seq1  AACATTCTTGATTAAACAGTCAATG-CCATTTTT-GCATATTCAGTTATA  1096
      |||| |||||| ||||||||||||| |||||||| ||||| |||| ||||
seq2  AACA-TCTTGA-TAAACAGTCAATGCCCATTTTTGGCATA-TCAG-TATA  1095

seq1  GTATCT-ATAGATTTTTTT  1114
      |||||| ||||||||||||
seq2  GTATCTAATAGATTTTTTT  1114


seq1: chr6_75660106_75661112
seq2: B6Ng01-273E22.g_65_1066 (reverse)

seq1  GAATATTAATTTAATTATAGCTGTTTTATTTATTTAAGTATTTATATAAA  50
      ||||||||| |||||||||||||||||| ||||||||||| |||||||||
seq2  GAATATTAA-TTAATTATAGCTGTTTTA-TTATTTAAGTA-TTATATAAA  47

seq1  TATATTTATATAAATATATTTATCTTTGAAGATACTATCTTCTTTTTGTC  100
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATA-TTATATAAATATATTTATC-TTGAAGATACTATCTTCTTTTTGTC  95

seq1  ATTCCTTTATACAGAATTTCTGATTATTTTGCTTTTAGATGAAATCGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTATACAGAATTTCTGATTATTTTGCTTTTAGATGAAATCGTAT  145

seq1  CATGTGTCTACAATATAGTTTAAAGGTCAATATGTTTTCATTGATTTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTCTACAATATAGTTTAAAGGTCAATATGTTTTCATTGATTTAGC  195

seq1  ATACAGATAATTTACATTAGAAGTGGGCTTCTGGAATCTGTTATCAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGATAATTTACATTAGAAGTGGGCTTCTGGAATCTGTTATCAACAT  245

seq1  GCTAATATTTATGACTCTACTCTCCTAGTAAAACTTGCCTTCCTCATCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATATTTATGACTCTACTCTCCTAGTAAAACTTGCCTTCCTCATCCA  295

seq1  AATGTTGGGCACACAAGTATTCATCTTAATTAATCTGCTTTGTGAATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGGGCACACAAGTATTCATCTTAATTAATCTGCTTTGTGAATTCA  345

seq1  GATCTTTATTTCTATATGATGAAAGTTTTTGTTTAGATTCTATTTTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTTATTTCTATATGATGAAAGTTTTTGTTTAGATTCTATTTTGTCT  395

seq1  TTTTTCACACCAGAGTGTATTCTATGATAAAATTATACCTATTTATCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCACACCAGAGTGTATTCTATGATAAAATTATACCTATTTATCACT  445

seq1  TATTTTGCAGTGATAATCCTTATTTTACCTTTTGCTTTTTGTCCATTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCAGTGATAATCCTTATTTTACCTTTTGCTTTTTGTCCATTAGA  495

seq1  GGTATCTAAGGTGTTTCTAATGAGCATCAAATTGTTTTGGGGTACACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCTAAGGTGTTTCTAATGAGCATCAAATTGTTTTGGGGTACACACC  545

seq1  TTCTCAGTCCACCCAACTTCATTCAACCTCCAGGCTTAATCTAGTCTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGTCCACCCAACTTCATTCAACCTCCAGGCTTAATCTAGTCTTCA  595

seq1  TATTGTTTGTTCTACCTCAGCCTGCTTTGTTCATATCAGTTAAAGAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTTGTTCTACCTCAGCCTGCTTTGTTCATATCAGTTAAAGAGTAG  645

seq1  AGGTCTACAAAACAATGTTTCATTATAAAAATACAAACAATATTAAAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTACAAAACAATGTTTCATTATAAAAATACAAACAATATTAAAAAC  695

seq1  CTAATTATTTTTCTCTTTCTAAATAAAATCCTCCAGTACTATTGATAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATTTTTCTCTTTCTAAATAAAATCCTCCAGTACTATTGATAGAC  745

seq1  TTGCCAATAAAAATTCCCATATTTGTACCACAAAATGGTACAAAATATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAATAAAAATTCCCATATTTGTACCACAAAATGGTACAAAATATTG  795

seq1  TACCACAAAATTTGCAAAAGAAATCATAAAGTTCATTTAAAAAACTCAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACAAAATTTGCAAAAGAAATCATAAAGTTCATTTAAAAAACTCAAG  845

seq1  AAATTTAAAGGAAAAACAAAACAAACAAACAAAAACCTCAATGAACGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAAAGGAAAAACAAAACAAACAAACAAAAACCTCAATGAACGTAA  895

seq1  AATAACTTAATGTCAAGAGAATAAATGCCTGAGTGTTGCTCAAGGAACAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTTAATGTCAAGAGAATAAATGCCTGAGTGTTGCTCAAGGAACAA  945

seq1  CAAATTTAGGATTGATTCAATTGGTAAAAAAAAGTCCAGAATTTGAAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTAGGATTGATTCAATTGGTAAAAAAAAGTCCAGAATTTGAAAAA  995

seq1  TGAATTC  1007
      |||||||
seq2  TGAATTC  1002


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