MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-275J15
Chromosome	6 (Build37)
Map Location	112,307,558 - 112,308,423
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Grm7, 1700054K19Rik, Lmcd1
Downstream gene	D630042P16Rik, LOC619975, Cav3, Oxtr, LOC434076, EG434077, Rad18, Srgap3, EG666387, EG620161, LOC666397, Thumpd3, EG434078, Setd5, Lhfpl4, Mtmr14, Cpne9, Brpf1, Ogg1, Camk1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Grm7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108073 MGI:1351344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700054K19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67336 MGI:1914586
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs

name	Lmcd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30937 MGI:1353635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D630042P16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243612 MGI:2443733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619975 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins pseudo : _no_value

name	Cav3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12391 MGI:107570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Oxtr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18430 MGI:109147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC434076 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 94 ESTs, 5 Proteins pseudo : _no_value

name	EG434077 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434077 MGI:3645010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 215 ESTs, 4 Proteins

name	Rad18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58186 MGI:1890476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srgap3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259302 MGI:2152938
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666387 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666387 MGI:3643192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs

name	EG620161 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620161 MGI:3648731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins

name	LOC666397 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666397
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Thumpd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14911 MGI:1277973
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434078 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434078 MGI:3645011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	Setd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72895 MGI:1920145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lhfpl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269788 MGI:3057108
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtmr14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:97287 MGI:1916075
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cpne9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:211232 MGI:2443052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Brpf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78783 MGI:1926033
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ogg1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18294 MGI:1097693
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Camk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52163 MGI:1098535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grm7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130419 GeneID:108073 MGI:1351344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, metabotropic 7 transcript_id : NM_177328.3

name	1700054K19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255260 GeneID:67336 MGI:1914586
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs product : RIKEN cDNA 1700054K19 gene transcript_id : XM_001480075.1

name	Lmcd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450156 GeneID:30937 MGI:1353635
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM and cysteine-rich domains 1 transcript_id : NM_144799.1

name	D630042P16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802588 GeneID:243612 MGI:2443733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630042P16 gene transcript_id : NM_175525.3

name	Cav3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982475 GeneID:12391 MGI:107570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caveolin 3 transcript_id : NM_007617.2

name	Oxtr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487242 GeneID:18430 MGI:109147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxytocin receptor transcript_id : NM_001081147.1

name	EG434077 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378025 GeneID:434077 MGI:3645010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 215 ESTs, 4 Proteins product : predicted gene, EG434077 transcript_id : XM_485815.4

name	Rad18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946725 GeneID:58186 MGI:1890476
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD18 homolog (S. cerevisiae) transcript_id : NM_021385.1

name	Srgap3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125345725 GeneID:259302 MGI:2152938
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLIT-ROBO Rho GTPase activating protein 3 transcript_id : NM_080448.3

name	EG666387 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378030 GeneID:666387 MGI:3643192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs product : predicted gene, EG666387 transcript_id : XM_983525.1

name	EG620161 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255398 GeneID:620161 MGI:3648731
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 4 Proteins product : predicted gene, EG620161 transcript_id : XM_884551.3

name	Thumpd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982314 GeneID:14911 MGI:1277973
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : THUMP domain containing 3 transcript_id : NM_008188.2

name	EG434078 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83029581 GeneID:434078 MGI:3645011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG434078 transcript_id : XM_489149.3

name	Setd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31742487 GeneID:72895 MGI:1920145
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain containing 5 transcript_id : NM_028385.1

name	Lhfpl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922608 GeneID:269788 MGI:3057108
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lipoma HMGIC fusion partner-like protein 4 transcript_id : NM_177763.3

name	Mtmr14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930426 GeneID:97287 MGI:1916075
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotubularin related protein 14 transcript_id : NM_026849.1

name	Cpne9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76881815 GeneID:211232 MGI:2443052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : copine family member IX transcript_id : NM_170673.3

name	Brpf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794209 GeneID:78783 MGI:1926033
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain and PHD finger containing, 1 transcript_id : NM_030178.1

name	Ogg1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142374385 GeneID:18294 MGI:1097693
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 8-oxoguanine DNA-glycosylase 1 transcript_id : NM_010957.3

name	Camk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129899 GeneID:52163 MGI:1098535
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium/calmodulin-dependent protein kinase I transcript_id : NM_133926.2

name	Grm7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60460877 GeneID:108073 MGI:1351344
definition	GO_component : GO:0048787 - active zone presynaptic plasma membrane [Evidence TAS]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005246 - calcium channel regulator activity [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0001642 - group III metabotropic glutamate receptor activity [Evidence TAS]; GO:0030165 - PDZ domain binding [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005245 - voltage-gated calcium channel activity [Evidence IDA] GO_process : GO:0001662 - behavioral fear response [Evidence IMP]; GO:0001661 - conditioned taste aversion [Evidence IMP]; GO:0043526 - neuroprotection [Evidence TAS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0019226 - transmission of nerve impulse [Evidence IMP] codon_start : 1 note : G protein-coupled receptor, family C, group 1, member G; G protein-coupled receptor GRM7; metabotropic glutamate receptor 7; mGlu7a receptor product : glutamate receptor, metabotropic 7 protein_id : NP_796302.2

name	1700054K19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255261 GeneID:67336 MGI:1914586
definition	codon_start : 1 product : hypothetical protein LOC67336 protein_id : XP_001480125.1

name	Lmcd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450157 CCDS:CCDS20403.1 GeneID:30937 MGI:1353635
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003714 - transcription corepressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI] codon_start : 1 product : LIM and cysteine-rich domains 1 protein_id : NP_659048.1

name	D630042P16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425294 CCDS:CCDS20405.1 GeneID:243612 MGI:2443733
definition	codon_start : 1 product : Fls485 protein protein_id : NP_780734.1

name	Cav3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680852 CCDS:CCDS20406.1 GeneID:12391 MGI:107570
definition	GO_component : GO:0005901 - caveola [Evidence TAS]; GO:0016599 - caveolar membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006897 - endocytosis [Evidence TAS] codon_start : 1 product : caveolin 3 protein_id : NP_031643.1

name	Oxtr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487243 GeneID:18430 MGI:109147
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004990 - oxytocin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005000 - vasopressin receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : oxytocin receptor protein_id : NP_001074616.1

name	EG434077 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51716991 GeneID:434077 MGI:3645010
definition	codon_start : 1 product : similar to RIKEN cDNA 0610010K06 gene protein_id : XP_485815.1

name	Rad18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946726 GeneID:58186 MGI:1890476
definition	GO_component : GO:0000785 - chromatin [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : post-replication repair protein RAD18SC product : RAD18 homolog protein_id : NP_067360.1

name	Srgap3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125345726 GeneID:259302 MGI:2152938
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : rho GTPase activating protein 14; SLIT-ROBO Rho GTPase activating protein 2 product : brain stress early protein Gbi protein_id : NP_536696.3

name	EG666387 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378031 GeneID:666387 MGI:3643192
definition	codon_start : 1 product : hypothetical protein protein_id : XP_988619.1

name	EG620161 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029580 GeneID:620161 MGI:3648731
definition	codon_start : 1 product : similar to 40S ribosomal protein S29 protein_id : XP_889644.1

name	Thumpd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680129 CCDS:CCDS20410.1 GeneID:14911 MGI:1277973
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence IEA] [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : gene trap ROSA 26 antisense, Philippe Soriano product : THUMP domain containing 3 protein_id : NP_032214.1

name	EG434078 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029582 GeneID:434078 MGI:3645011
definition	codon_start : 1 product : hypothetical protein protein_id : XP_489149.3

name	Setd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31742488 CCDS:CCDS20411.1 GeneID:72895 MGI:1920145
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 product : SET domain containing 5 protein_id : NP_082661.1

name	Lhfpl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:144922609 GeneID:269788 MGI:3057108
definition	codon_start : 1 product : lipoma HMGIC fusion partner-like 4 protein_id : NP_808431.2

name	Mtmr14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930427 CCDS:CCDS20412.1 GeneID:97287 MGI:1916075
definition	codon_start : 1 product : myotubularin related protein 14 protein_id : NP_081125.1

name	Cpne9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28416905 CCDS:CCDS20413.1 GeneID:211232 MGI:2443052
definition	codon_start : 1 product : copine-like protein protein_id : NP_733773.2

name	Brpf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794210 GeneID:78783 MGI:1926033
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : bromodomain containing 1 protein_id : NP_084454.1

name	Ogg1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18921208 CCDS:CCDS20414.1 GeneID:18294 MGI:1097693
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IMP]; GO:0005634 - nucleus [Evidence IMP] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence TAS]; GO:0003906 - DNA-(apurinic or apyrimidinic site) lyase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016798 - hydrolase activity, acting on glycosyl bonds [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA]; GO:0008017 - microtubule binding [Evidence IDA]; GO:0000702 - oxidized base lesion DNA N-glycosylase activity [Evidence TAS]; GO:0008534 - oxidized purine base lesion DNA N-glycosylase activity [Evidence IMP] [Evidence IDA] GO_process : GO:0006284 - base-excision repair [Evidence IMP] [Evidence IDA]; GO:0006281 - DNA repair [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation product : 8-oxoguanine DNA-glycosylase 1 protein_id : NP_035087.2

name	Camk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527140 CCDS:CCDS20415.1 GeneID:52163 MGI:1098535
definition	GO_component : GO:0005954 - calcium- and calmodulin-dependent protein kinase complex [Evidence TAS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0006913 - nucleocytoplasmic transport [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007165 - signal transduction [Evidence IDA] codon_start : 1 product : calcium/calmodulin-dependent protein kinase I protein_id : NP_598687.1

name	LOC666397 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666397
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:257635
definition	standard_name : px-35d4

name	(CDS detail)
type	STS
link
xref	UniSTS:277300
definition	standard_name : GRM7_1388

name	(CDS detail)
type	STS
link
xref	UniSTS:185677
definition	standard_name : BB176677

name	(CDS detail)
type	STS
link
xref	UniSTS:142587
definition	standard_name : D6Mit343

name	(CDS detail)
type	STS
link
xref	UniSTS:130834
definition	standard_name : D6Mit287

name	(CDS detail)
type	STS
link
xref	UniSTS:123095
definition	standard_name : 11.MMHAP90FRD8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130941
definition	standard_name : D6Mit389

name	(CDS detail)
type	STS
link
xref	UniSTS:130956
definition	standard_name : D6Mit54

name	(CDS detail)
type	STS
link
xref	UniSTS:235517
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:244322
definition	standard_name : AI071230

name	(CDS detail)
type	STS
link
xref	UniSTS:179431
definition	standard_name : AW455500

name	(CDS detail)
type	STS
link
xref	UniSTS:159555
definition	standard_name : AI385751

name	(CDS detail)
type	STS
link
xref	UniSTS:235518
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:484965
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:271619
definition	standard_name : PMC170950P1

name	(CDS detail)
type	STS
link
xref	UniSTS:272964
definition	standard_name : PMC316374P3

name	(CDS detail)
type	STS
link
xref	UniSTS:130650
definition	standard_name : D6Mit107

name	(CDS detail)
type	STS
link
xref	UniSTS:235519
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130776
definition	standard_name : D6Mit23

name	(CDS detail)
type	STS
link
xref	UniSTS:96455
definition	standard_name : RH102121

name	(CDS detail)
type	STS
link
xref	UniSTS:125292
definition	standard_name : MHAa70g1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:215151
definition	standard_name : RH131868

name	(CDS detail)
type	STS
link
xref	UniSTS:159556
definition	standard_name : AI452337

name	(CDS detail)
type	STS
link
xref	UniSTS:123899
definition	standard_name : 30.MMHAP28FRB12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130882
definition	standard_name : D6Mit328

name	(CDS detail)
type	STS
link
xref	UniSTS:208009
definition	standard_name : AI036285

name	(CDS detail)
type	STS
link
xref	UniSTS:213491
definition	standard_name : RH130204

name	(CDS detail)
type	STS
link
xref	UniSTS:179432
definition	standard_name : AW556087

name	(CDS detail)
type	STS
link
xref	UniSTS:179433
definition	standard_name : AV258896

name	(CDS detail)
type	STS
link
xref	UniSTS:271057
definition	standard_name : PMC150244P1

name	(CDS detail)
type	STS
link
xref	UniSTS:235520
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:210580
definition	standard_name : RH136600

name	(CDS detail)
type	STS
link
xref	UniSTS:210571
definition	standard_name : RH136591

name	(CDS detail)
type	STS
link
xref	UniSTS:230202
definition	standard_name : G66214

name	(CDS detail)
type	STS
link
xref	UniSTS:64710
definition	standard_name : RH12737

name	(CDS detail)
type	STS
link
xref	UniSTS:164334
definition	standard_name : AI604880

name	(CDS detail)
type	STS
link
xref	UniSTS:130931
definition	standard_name : D6Mit378

name	(CDS detail)
type	STS
link
xref	UniSTS:159557
definition	standard_name : AW553738

name	(CDS detail)
type	STS
link
xref	UniSTS:208011
definition	standard_name : BB407082

name	(CDS detail)
type	STS
link
xref	UniSTS:144081
definition	standard_name : Ogg1

name	(CDS detail)
type	STS
link
xref	UniSTS:167474
definition	standard_name : D6Ertd263e

name	(CDS detail)
type	STS
link
xref	UniSTS:159558
definition	standard_name : AI505105

name	(CDS detail)
type	STS
link
xref	UniSTS:130643
definition	standard_name : D6Mit10

name	LOC619975 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255396 GeneID:619975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : similar to ribosomal protein L23a pseudo : _no_value transcript_id : XR_034821.1

name	LOC434076 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255397 GeneID:434076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 94 ESTs, 5 Proteins product : similar to zinc finger protein 289 pseudo : _no_value transcript_id : XR_035710.1

clone name	MSMg01-335C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-524J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-275J15.b	B6Ng01-275J15.g
ACC	GA076597	GA076598
length	868	1,171
definition	B6Ng01-275J15.b	B6Ng01-275J15.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctctctatccataagcagaagatgtagaggggtggaggagagtat gtgtgatcgagagcctcatgcacttggagcatctgaagcagctgccaggg tgtctacagtgctgcttagagcccctgttgccctccacctaggactattg attccctcgatctcacatttatttatcatttttctccccagcaaattagt caggattacttgctgtatcagtgccgcacacttcagctcaagggtgctct actatgtccttctgctggactatatgcccttagaatttttccttcattca tttgttcagaattgtctttgctgatgcctacagaataattccaacaggtg caaggagtttatatgaatcttctgggtggtgggtccatttaaaagacgtt ggtagacaattgaagtgctgggacatatatacatcctatgtagaatatgc tggtggcttaaagattatggccttctttccatgggagtaaaaggaaacag gagggaggcaaattggctaggaatattgaggcccagaggataaacgggaa agggtatccctggtcattgtctgaactagtgacagaggaggccaacattg aagagcttgagatccaatgataaacctggctctgctccttatgccacatg ggcaggtggctggacctctccaaggctgtttcatcatccgtgagatagac tggatgacataacttctgcctgtgaggtgtccatcaagacaagtggagag atgctaggcacggcttctgactcatggtgttgggaaaatatgatcaacta ttggtggtaacagtaatgaaaaataataggttgttggtgaagatggtgtt gataagtgagggtgctga	gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaattaaaacaaccctgagat tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaacaggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc taggatacccaagatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa caaaacacccttagaaggagttacagagacaaagtttggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataatc agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa ggacccagatgtagctgtctcttgtgagactatgccggggccctagcaaa cacagaagtggatgcccacagtcagctaatggatgggatcacaggctccc aatggaggagctagagaaagtacccaggagctaaagggatctgcacctat aggtggatcacatatgactaaccagtaccccgagctctgacctctagctg catatgtatcaaagatgcctagtcgcatcactggaaagagaggccaattg acaccacaaaccttttatgcctaaccaggaccgccaggctaaaatgggga ctggccggctaagggggaagt
quality values	Open. Hide. 47 14 21 39 52 54 62 62 62 62 54 52 54 62 37 14 62 56 56 56 47 47 62 62 62 62 41 31 49 62 62 50 62 59 62 62 62 59 62 62 59 59 62 59 46 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 56 28 62 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 49 59 48 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 62 62 56 62 56 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 47 47 62 62 54 62 62 56 62 62 62 62 62 62 62 62 47 42 62 62 62 46 62 62 62 62 62 62 62 54 62 62 62 62 62 62 47 62 62 47 62 62 54 47 54 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 54 54 62 62 62 62 45 49 62 58 54 42 50 54 35 58 42 42 52 58 52 54 51 58 58 58 58 54 47 58 58 47 54 58 58 58 58 58 58 58 52 54 52 54 58 58 58 58 58 54 54 52 44 54 41 52 54 58 54 54 52 52 58 27 58 54 35 54 37 41 34 52 44 39 54 52 54 58 54 50 58 52 47 52 52 58 58 52 49 50 58 39 29 58 58 58 41 41 47 58 50 46 49 54 58 45 49 41 51 51 50 51 40 48 49 49 47 51 50 58 50 42 30 52 50 51 51 58 50 51 50 41 58 46 51 41 37 49 54 54 42 42 48 51 50 52 32 51 36 48 16 58 24 50 51 54 58 53 39 32 50 50 37 58 54 58 52 52 54 49 31 39 39 51 43 50 33 40 58 43 49 42 50 50 21 42 53 27 33 51 53 38 42 50 40 40 54 50 53 41 50 51 23 44 26 52 40 49 30 25 47 40 27 29 50 38 17 30 32 35 37 40 35 38 54 51 54 49 38 47 41 51 49 34 49 31 39 49 39 54 32 28 31 32 40 47 35 33 44 28 37 33 33 53 40 42 32 49 40 44 42 54 26 33 46 33 42 37 39 33 28 45 34 31 40 32 27 30 52 39 33 21 32 51 26 42 31 45 29 22 12 38 26 23 10 9 49 49 51 23 17 20 29 34 34 17 41 18 24 41 16 21 25 36 31 23 23 28 12 33 21 31 46 30 45 25 25 26 32 9 6 27 24 30 25 29 18 46 46 13 32 31 30 13 29	Open. Hide. 62 47 51 42 62 62 62 47 42 62 62 62 49 35 44 62 59 56 59 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 54 37 59 59 62 62 62 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 54 62 62 62 62 59 62 62 59 62 54 54 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 54 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 56 42 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 46 37 46 62 62 62 62 62 62 54 62 46 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 41 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 58 58 58 58 58 58 51 58 58 54 45 58 58 58 58 45 42 58 58 52 54 58 58 54 58 58 54 58 58 58 58 58 58 54 45 58 52 58 58 58 52 58 58 58 49 58 50 54 53 58 58 51 58 58 49 54 58 58 53 58 51 58 53 58 58 58 58 58 58 54 58 58 58 53 58 51 58 58 49 50 58 49 51 58 58 37 32 46 38 44 49 51 51 58 46 50 58 58 41 39 58 51 58 41 58 28 32 47 41 58 48 52 53 41 44 39 52 50 52 58 49 51 39 53 50 51 44 51 58 51 52 53 52 52 58 44 44 39 52 50 58 54 49 58 47 40 51 53 42 50 50 58 58 58 58 49 39 52 54 54 39 38 24 51 54 46 54 49 53 54 42 54 39 44 26 37 38 46 53 53 51 37 46 39 44 44 40 49 51 42 52 32 53 52 35 49 46 30 49 51 52 40 51 54 54 52 42 40 35 44 47 53 40 40 37 53 32 10 42 41 31 31 53 40 52 34 52 54 24 29 32 52 54 53 33 32 51 47 51 34 52 26 47 53 35 46 16 45 31 32 45 53 47 31 46 29 30 33 40 27 22 34 31 34 39 34 35 33 33 28 20 27 30 45 31 30 29 39 30 30 26 30 24 46 51 36 16 23 28 43 28 40 41 36 31 28 31 31 26 30 31 31 31 39 35 37 24 27 21 47 42 31 31 33 32 27 29 25 30 31 32 28 42 31 32 31 31 31 29 31 26 31 33 32 30 38 31 30 31 32 21 48 48 44 25 23 29 31 35 48 29 27 31 19 21 46 31 32 23 29 21 31 27 24 22 35 37 30 26 31 36 28 15 22 39 31 32 43 19 27 19 38 33 31 19 14 22 24 44 43 29 7 41 11 23 32 13 26 19 41 27 21 27 38 34 17 33 31 21 27 26 25 17 17 34 31 41 21 16 29 27 32 35 36 32 32 32 32 15 26 10 21 26 8 13 17 48 12 22 25 22 21 22 4 5 4 9 28 21 48 25 11 10 16 18 26 30 29 11 30 9 32 27 27 20 21 14 18 48 22 23 19 18 29 33 15 5 3 6 25 16 26 19 9 40 17 21 34 13 13 23 24 15 19 19 27 13 14 5 6 12 10 21 10 20 20 18 21 18 18 13 3 5 30 13 26 8 34 9 22 11 16 10 6 16 26 7 14 23 47 40 15 27 5 7 16 20 14 23 14 10 9 7 13 16 19 16 19 21 15 16 15 5 13 8 10 13 14 8 15 16 13 17 24 7 5 4 12 3 7 21 15 4 5 4 4 3 3 13 8 5 6 4 6 2 3 13 12 8 4 1 3 6 16 18 24 5 5 15 5 6 2 1 4 4 4 4 10 11 18 16 5 8 19 30 17 4 6 18 5 3 3 1 3 3 3 6 4 9 5 2 2 6 5 11 16 7 20 17 7 4 19 17 17 7 1 3 25 17 9 24 5 8 18 3 4 4 5 3 1 2 4 4 3 8 24 11 5 6 23 4 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_112307558_112308423
seq2: B6Ng01-275J15.b_48_915 (reverse)

seq1  TCAGCACCCTCAC-TATCAACACCATCTTCACCAACAACCTATTA-TTTT  48
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  TCAGCACCCTCACTTATCAACACCATCTTCACCAACAACCTATTATTTTT  50

seq1  CATTACTGTTACCACCAATAGTTGATCATATTTTCCCAACACCATGAGTC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTGTTACCACCAATAGTTGATCATATTTTCCCAACACCATGAGTC  100

seq1  AGAAGCCGTGCCTAGCATCTCTCCACTTGTCTTGATGGACACCTCACAGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCGTGCCTAGCATCTCTCCACTTGTCTTGATGGACACCTCACAGG  150

seq1  CAGAAGTTATGTCATCCAGTCTATCTCACGGATGATGAAACAGCCTTGGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTATGTCATCCAGTCTATCTCACGGATGATGAAACAGCCTTGGA  200

seq1  GAGGTCCAGCCACCTGCCCATGTGGCATAAGGAGCAGAGCCAGGTTTATC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCAGCCACCTGCCCATGTGGCATAAGGAGCAGAGCCAGGTTTATC  250

seq1  ATTGGATCTCAAGCTCTTCAATGTTGGCCTCCTCTGTCACTAGTTCAGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGATCTCAAGCTCTTCAATGTTGGCCTCCTCTGTCACTAGTTCAGAC  300

seq1  AATGACCAGGGATACCCTTTCCCGTTTATCCTCTGGGCCTCAATATTCCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACCAGGGATACCCTTTCCCGTTTATCCTCTGGGCCTCAATATTCCT  350

seq1  AGCCAATTTGCCTCCCTCCTGTTTCCTTTTACTCCCATGGAAAGAAGGCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAATTTGCCTCCCTCCTGTTTCCTTTTACTCCCATGGAAAGAAGGCC  400

seq1  ATAATCTTTAAGCCACCAGCATATTCTACATAGGATGTATATATGTCCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTTAAGCCACCAGCATATTCTACATAGGATGTATATATGTCCCA  450

seq1  GCACTTCAATTGTCTACCAACGTCTTTTAAATGGACCCACCACCCAGAAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCAATTGTCTACCAACGTCTTTTAAATGGACCCACCACCCAGAAG  500

seq1  ATTCATATAAACTCCTTGCACCTGTTGGAATTATTCTGTAGGCATCAGCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATAAACTCCTTGCACCTGTTGGAATTATTCTGTAGGCATCAGCA  550

seq1  AAGACAATTCTGAACAAATGAATGAAGGAAAAATTCTAAGGGCATATAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATTCTGAACAAATGAATGAAGGAAAAATTCTAAGGGCATATAGT  600

seq1  CCAGCAGAAGGACATAGTAGAGCACCCTTGAGCTGAAGTGTGCGGCACTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGAAGGACATAGTAGAGCACCCTTGAGCTGAAGTGTGCGGCACTG  650

seq1  ATACAGCAAGTAATCCTGACTAATTTGCTGGGGAGAAAAATGATAAATAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCAAGTAATCCTGACTAATTTGCTGGGGAGAAAAATGATAAATAA  700

seq1  ATGTGAGATCGAGGGAATCAATAGTCCTAGGTGGAGGGCAACAGGGGCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGATCGAGGGAATCAATAGTCCTAGGTGGAGGGCAACAGGGGCTC  750

seq1  TAAGCAGCACTGTAGACACCCTGGCAGCTGCTTCAGATGCTCCAAGTGCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGCACTGTAGACACCCTGGCAGCTGCTTCAGATGCTCCAAGTGCA  800

seq1  TGAGGCTCTCGATCACACATACTCTCCTCCACCCCTCTACATCTTCTGCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCTCTCGATCACACATACTCTCCTCCACCCCTCTACATCTTCTGCT  850

seq1  TATGGATAGAGAGAATTC  866
      ||||||||||||||||||
seq2  TATGGATAGAGAGAATTC  868

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information