MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-278P15
Chromosome	6 (Build37)	1 (Build37)
Map Location	123,561,746 - 123,562,435	127,285,815 - 127,285,852
singlet/doublet	singlet	singlet
Overlap gene	EG546913
Upstream gene	Dppa3, EG667107, LOC100043805, Nanog, LOC100038891, Slc2a3, LOC100043502, D530008I22, LOC100043505, Foxj2, C3ar1, Necap1, EG384482, Clec4a1, Clec4a3, Clec4a4, Clec4b1, Clec4a2, Clec4b2, Ppia-ps6_1344.1, Clec4n, Clec4d, Clec4e, EG232358, EG667180, LOC626436, EG546912, LOC100043511, Vmn2r-ps32
Downstream gene	LOC100043516, EG435916, EG243628, EG545874, LOC384484, LOC623282, V2r1b, EG384486, Vmn2r-ps34, Vmn2r27, LOC623374, EG622297, Cd163, LOC100043530, 1700013D24Rik, 1700027F06Rik, 1700060L04Rik, Pex5, Clstn3, C1rl, C1r, C1s, LOC667277
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dppa3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73708 MGI:1920958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667107 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667107 MGI:3646670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 632 ESTs, 5 Proteins pseudo : _no_value

name	LOC100043805 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 mRNAs, 1380 ESTs, 6 Proteins

name	Nanog (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71950 MGI:1919200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038891 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc2a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20527 MGI:95757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043502 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 76 ESTs, 10 Proteins

name	D530008I22 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:330414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs

name	LOC100043505 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Foxj2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60611 MGI:1926805
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C3ar1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12267 MGI:1097680
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Necap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67602 MGI:1914852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG384482 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384482 MGI:3645576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins

name	Clec4a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:269799 MGI:3036291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clec4a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73149 MGI:1920399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clec4a4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:474145 MGI:3624119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clec4b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69810 MGI:1917060
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clec4a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26888 MGI:1349412
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clec4b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381809 MGI:3588267
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps6_1344.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545873
definition	note : peptidylprolyl isomerase A pseudogene 6_1344.1 pseudo : _no_value

name	Clec4n (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56620 MGI:1861231
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clec4d (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17474 MGI:1298389
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clec4e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56619 MGI:1861232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG232358 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232358 MGI:3647444
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins

name	EG667180 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667180 MGI:3646439
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins

name	LOC626436 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626436
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG546912 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546912 MGI:3647953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins

name	LOC100043511 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Vmn2r-ps32 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043512
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG546913 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546913 MGI:3647952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins

name	LOC100043516 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043516
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	EG435916 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435916 MGI:3646826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	EG243628 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243628 MGI:3647530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins

name	EG545874 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545874 MGI:3644645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 23 Proteins

name	LOC384484 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC623282 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	V2r1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56552 MGI:2678394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG384486 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384486 MGI:3645579
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins

name	Vmn2r-ps34 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623337
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	Vmn2r27 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:232367
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC623374 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins

name	EG622297 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622297 MGI:3648854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins pseudo : _no_value

name	Cd163 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93671 MGI:2135946
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043530 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	1700013D24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76921 MGI:1924171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 1 Protein

name	1700027F06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72268 MGI:1919518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	1700060L04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73378 MGI:1920628
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Pex5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19305 MGI:1098808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Clstn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232370 MGI:2178323
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1rl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232371 MGI:2660692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50909 MGI:1355313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C1s (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50908 MGI:1355312
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 143 ESTs, 22 Proteins

name	Dppa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21218415 GeneID:73708 MGI:1920958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developmental pluripotency-associated 3 transcript_id : NM_139218.1

name	LOC100043805 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255415 GeneID:100043805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 mRNAs, 1376 ESTs, 6 Proteins product : similar to ribosomal protein L15, transcript variant 1 transcript_id : XM_001481031.1

name	LOC100043805 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255417 GeneID:100043805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 mRNAs, 1378 ESTs, 6 Proteins product : similar to ribosomal protein L15, transcript variant 2 transcript_id : XM_001481032.1

name	Nanog (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625917 GeneID:71950 MGI:1919200
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Nanog homeobox transcript_id : NM_028016.1

name	LOC100038891 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255105 GeneID:100038891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100038891 transcript_id : XM_001471588.1

name	Slc2a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377808 GeneID:20527 MGI:95757
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 2 (facilitated glucose transporter), member 3 transcript_id : NM_011401.3

name	LOC100043502 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255304 GeneID:100043502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 76 ESTs, 10 Proteins product : similar to uridine-cytidine kinase 1 transcript_id : XM_001480323.1

name	D530008I22 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255306 GeneID:330414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs product : hypothetical protein D530008I22 transcript_id : XM_001480324.1

name	LOC100043505 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255310 GeneID:100043505
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043505 transcript_id : XM_001480329.1

name	Foxj2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254530 GeneID:60611 MGI:1926805
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : forkhead box J2 transcript_id : NM_021899.2

name	C3ar1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753223 GeneID:12267 MGI:1097680
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 3a receptor 1 transcript_id : NM_009779.1

name	Necap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370343 GeneID:67602 MGI:1914852
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NECAP endocytosis associated 1 transcript_id : NM_026267.2

name	EG384482 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255419 GeneID:384482 MGI:3645576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : predicted gene, EG384482 transcript_id : XM_357669.4

name	Clec4a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059160 GeneID:269799 MGI:3036291
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member a1 transcript_id : NM_199311.1

name	Clec4a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625688 GeneID:73149 MGI:1920399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member a3 transcript_id : NM_153197.3

name	Clec4a4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54312069 GeneID:474145 MGI:3624119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member a4 transcript_id : NM_001005860.1

name	Clec4b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368198 GeneID:69810 MGI:1917060
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member b1 transcript_id : NM_027218.2

name	Clec4a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350032 GeneID:26888 MGI:1349412
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member a2 transcript_id : NM_011999.3

name	Clec4b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51921312 GeneID:381809 MGI:3588267
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member b2 transcript_id : NM_001004159.1

name	Clec4n (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9910157 GeneID:56620 MGI:1861231
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member n transcript_id : NM_020001.1

name	Clec4d (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350362 GeneID:17474 MGI:1298389
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member d transcript_id : NM_010819.3

name	Clec4e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130533 GeneID:56619 MGI:1861232
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-type lectin domain family 4, member e transcript_id : NM_019948.2

name	EG232358 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83029645 GeneID:232358 MGI:3647444
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 Proteins product : predicted gene, EG232358 transcript_id : XM_144965.4

name	EG667180 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378087 GeneID:667180 MGI:3646439
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins product : predicted gene, EG667180 transcript_id : XM_988849.1

name	EG546912 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83029647 GeneID:546912 MGI:3647953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins product : predicted gene, EG546912 transcript_id : XM_887513.1

name	EG546913 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255420 GeneID:546913 MGI:3647952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins product : predicted gene, EG546913 transcript_id : XM_621729.4

name	LOC100043516 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255314 GeneID:100043516
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to gag transcript_id : XM_001480348.1

name	EG435916 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:63548770 GeneID:435916 MGI:3646826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : predicted gene, EG435916 transcript_id : XM_487960.2

name	EG243628 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83029659 GeneID:243628 MGI:3647530
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins product : predicted gene, EG243628 transcript_id : XM_144968.5

name	EG545874 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255422 GeneID:545874 MGI:3644645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 23 Proteins product : predicted gene, EG545874 transcript_id : XM_620361.4

name	V2r1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392100 GeneID:56552 MGI:2678394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 2, receptor, 1b transcript_id : NM_019917.2

name	EG384486 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255317 GeneID:384486 MGI:3645579
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 Proteins product : predicted gene, EG384486 transcript_id : XM_001480355.1

name	LOC623374 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255320 GeneID:623374
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to putative glialblastoma cell differentiation-related transcript_id : XM_001480361.1

name	Cd163 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716384 GeneID:93671 MGI:2135946
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CD163 antigen transcript_id : NM_053094.1

name	1700013D24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255423 GeneID:76921 MGI:1924171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 1 Protein product : RIKEN cDNA 1700013D24 gene transcript_id : XM_989548.2

name	1700027F06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378104 GeneID:72268 MGI:1919518
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 1700027F06 gene transcript_id : XM_989580.1

name	1700060L04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255325 GeneID:73378 MGI:1920628
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1700060L04 gene transcript_id : XM_001480369.1

name	Pex5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930736 GeneID:19305 MGI:1098808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome biogenesis factor 5 transcript_id : NM_008995.2

name	Pex5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113930729 GeneID:19305 MGI:1098808
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome biogenesis factor 5 transcript_id : NM_175933.2

name	Clstn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803023 GeneID:232370 MGI:2178323
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calsyntenin 3 transcript_id : NM_153508.3

name	C1rl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83649724 GeneID:232371 MGI:2660692
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 1, r subcomponent-like transcript_id : NM_181344.4

name	C1r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62990159 GeneID:50909 MGI:1355313
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 1, r subcomponent transcript_id : NM_023143.2

name	C1s (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450096 GeneID:50908 MGI:1355312
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : complement component 1, s subcomponent transcript_id : NM_144938.1

name	LOC667277 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94378098 GeneID:667277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 143 ESTs, 22 Proteins product : similar to complement component C1rb, transcript variant 2 transcript_id : XM_001002804.1

name	Dppa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21218416 CCDS:CCDS20500.1 GeneID:73708 MGI:1920958
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0001939 - female pronucleus [Evidence IDA]; GO:0001940 - male pronucleus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_process : GO:0040016 - embryonic cleavage [Evidence IMP] codon_start : 1 note : primordial germ cell 7 product : developmental pluripotency-associated 3 protein_id : NP_631964.1

name	LOC100043805 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255416 GeneID:100043805
definition	codon_start : 1 product : similar to ribosomal protein L15 isoform 1 protein_id : XP_001481081.1

name	LOC100043805 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255418 GeneID:100043805
definition	codon_start : 1 product : similar to ribosomal protein L15 isoform 2 protein_id : XP_001481082.1

name	Nanog (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625918 GeneID:71950 MGI:1919200
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence ISS]; GO:0009790 - embryonic development [Evidence IMP]; GO:0009880 - embryonic pattern specification [Evidence IEP]; GO:0008406 - gonad development [Evidence IEP]; GO:0042664 - negative regulation of endodermal cell fate specification [Evidence TAS]; GO:0045595 - regulation of cell differentiation [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0017145 - stem cell division [Evidence IDA] codon_start : 1 note : early embryo specific expression NK family product : homeobox transcription factor Nanog protein_id : NP_082292.1

name	LOC100038891 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255106 GeneID:100038891
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001471638.1

name	Slc2a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543726 CCDS:CCDS20502.1 GeneID:20527 MGI:95757
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005386 - carrier activity [Evidence IEA]; GO:0005351 - sugar porter activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : solute carrier family 2 (facilitated glucose transporter), member 3 protein_id : NP_035531.2

name	LOC100043502 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255305 GeneID:100043502
definition	codon_start : 1 product : similar to uridine-cytidine kinase 1 protein_id : XP_001480373.1

name	D530008I22 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255307 GeneID:330414
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480374.1

name	LOC100043505 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255311 GeneID:100043505
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480379.1

name	Foxj2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11230810 CCDS:CCDS20503.1 GeneID:60611 MGI:1926805
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : forkhead box J2 protein_id : NP_068699.1

name	C3ar1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753224 CCDS:CCDS20504.1 GeneID:12267 MGI:1097680
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004942 - anaphylatoxin receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006956 - complement activation [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : anaphylatoxin C3a receptor product : complement component 3a receptor 1 protein_id : NP_033909.1

name	Necap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229051 CCDS:CCDS20505.1 GeneID:67602 MGI:1914852
definition	GO_component : GO:0030125 - clathrin vesicle coat [Evidence IDA]; GO:0005905 - coated pit [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006897 - endocytosis [Evidence IEA] [Evidence IMP]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : snoRNA MBI-129; brain enriched NECAP2 similar protein; clathrin-coated vesicle coat protein product : adaptin-ear-binding coat-associated protein 1 protein_id : NP_080543.2

name	EG384482 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38085129 GeneID:384482 MGI:3645576
definition	codon_start : 1 product : similar to mitochondrial ribosomal protein S21 protein_id : XP_357669.1

name	Clec4a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059161 CCDS:CCDS20507.1 GeneID:269799 MGI:3036291
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] codon_start : 1 note : dendritic cell inhibitory receptor 4 product : C-type lectin domain family 4, member a1 protein_id : NP_955015.1

name	Clec4a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54291706 CCDS:CCDS20508.1 GeneID:73149 MGI:1920399
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] codon_start : 1 product : dendritic cell inhibitory receptor 3 protein_id : NP_694877.2

name	Clec4a4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54312070 CCDS:CCDS20509.1 GeneID:474145 MGI:3624119
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] codon_start : 1 product : dendritic cell inhibitory receptor 2 protein_id : NP_001005860.1

name	Clec4b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386214 GeneID:69810 MGI:1917060
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] codon_start : 1 note : antigen presenting cell lectin-like receptor A2 product : dendritic cell immunoactivating receptor protein_id : NP_081494.1

name	Clec4a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753442 CCDS:CCDS20510.1 GeneID:26888 MGI:1349412
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence TAS] GO_function : GO:0005529 - sugar binding [Evidence TAS] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : dendritic cell immunoreceptor; C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 6 product : C-type lectin domain family 4, member a2 protein_id : NP_036129.1

name	Clec4b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921313 CCDS:CCDS20511.1 GeneID:381809 MGI:3588267
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] codon_start : 1 product : antigen presenting cell lectin-like receptor A1 protein_id : NP_001004159.1

name	Clec4n (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910158 CCDS:CCDS20512.1 GeneID:56620 MGI:1861231
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 10 product : C-type lectin domain family 4, member n protein_id : NP_064385.1

name	Clec4d (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098075 CCDS:CCDS20513.1 GeneID:17474 MGI:1298389
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 exception : mismatches in translation note : macrophage C-type lectin; C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 8; C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 9 product : C-type lectin, superfamily member 8 protein_id : NP_034949.2

name	Clec4e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910162 CCDS:CCDS20514.1 GeneID:56619 MGI:1861232
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 note : C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 9 product : C-type lectin, superfamily member 9 protein_id : NP_064332.1

name	EG232358 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029646 GeneID:232358 MGI:3647444
definition	codon_start : 1 product : similar to putative pheromone receptor V2R1b protein_id : XP_144965.4

name	EG667180 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378088 GeneID:667180 MGI:3646439
definition	codon_start : 1 product : similar to putative pheromone receptor V2R1b protein_id : XP_993943.1

name	EG546912 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029648 GeneID:546912 MGI:3647953
definition	codon_start : 1 product : similar to putative pheromone receptor V2R1b protein_id : XP_892606.1

name	EG546913 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255421 GeneID:546913 MGI:3647952
definition	codon_start : 1 product : similar to putative pheromone receptor V2R1b protein_id : XP_621729.4

name	LOC100043516 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255315 GeneID:100043516
definition	codon_start : 1 product : similar to gag protein_id : XP_001480398.1

name	EG435916 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63548771 GeneID:435916 MGI:3646826
definition	codon_start : 1 product : similar to putative pheromone receptor V2R1b protein_id : XP_487960.2

name	EG243628 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029660 GeneID:243628 MGI:3647530
definition	codon_start : 1 product : similar to putative pheromone receptor V2R1b protein_id : XP_144968.5

name	EG545874 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83029664 GeneID:545874 MGI:3644645
definition	codon_start : 1 product : similar to Vomeronasal type-2 receptor 1b precursor (Putative pheromone receptor V2R1b) protein_id : XP_620361.2

name	V2r1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392101 CCDS:CCDS20515.1 GeneID:56552 MGI:2678394
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008067 - metabotropic glutamate, GABA-B-like receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007216 - metabotropic glutamate receptor signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : tissue-type vomeronasal neurons putative pheromone receptor V2R1 product : vomeronasal 2, receptor, 1b protein_id : NP_064301.2

name	EG384486 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255318 GeneID:384486 MGI:3645579
definition	codon_start : 1 product : similar to putative pheromone receptor V2R1b protein_id : XP_001480405.1

name	LOC623374 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255321 GeneID:623374
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480411.1

name	Cd163 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716385 CCDS:CCDS20516.1 GeneID:93671 MGI:2135946
definition	GO_function : GO:0005044 - scavenger receptor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006953 - acute-phase response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 exception : mismatches in translation product : CD163 antigen protein_id : NP_444324.1

name	1700013D24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378103 GeneID:76921 MGI:1924171
definition	codon_start : 1 product : hypothetical protein LOC76921 protein_id : XP_994642.1

name	1700027F06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94378105 GeneID:72268 MGI:1919518
definition	codon_start : 1 product : hypothetical protein LOC72268 protein_id : XP_994674.1

name	1700060L04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255326 GeneID:73378 MGI:1920628
definition	codon_start : 1 product : hypothetical protein LOC73378 protein_id : XP_001480419.1

name	Pex5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28565271 CCDS:CCDS20518.1 GeneID:19305 MGI:1098808
definition	GO_component : GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0000268 - peroxisome targeting sequence binding [Evidence TAS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001764 - neuron migration [Evidence IMP]; GO:0007031 - peroxisome organization and biogenesis [Evidence IEA] [Evidence IDA]; GO:0006625 - protein targeting to peroxisome [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; peroxisome receptor 1; peroxin 5 product : peroxin 5 isoform 2 protein_id : NP_787947.1

name	Pex5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113930737 CCDS:CCDS20517.1 GeneID:19305 MGI:1098808
definition	GO_component : GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0000268 - peroxisome targeting sequence binding [Evidence TAS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001764 - neuron migration [Evidence IMP]; GO:0007031 - peroxisome organization and biogenesis [Evidence IEA] [Evidence IDA]; GO:0006625 - protein targeting to peroxisome [Evidence TAS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; peroxisome receptor 1; peroxin 5 product : peroxin 5 isoform 1 protein_id : NP_033021.2

name	Clstn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943822 CCDS:CCDS20519.1 GeneID:232370 MGI:2178323
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence IEA] codon_start : 1 product : calsyntenin 3 protein_id : NP_705728.1

name	C1rl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83649725 CCDS:CCDS20520.1 GeneID:232371 MGI:2660692
definition	GO_component : GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : C1r-like protein; complement component 1, r subcomponent like protein product : complement component 1, r subcomponent-like protein_id : NP_851989.2

name	C1r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62990160 CCDS:CCDS20521.1 GeneID:50909 MGI:1355313
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003815 - complement component C1r activity [Evidence IEA]; GO:0003816 - complement component C1s activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : complement component 1, r subcomponent, b; complement component C1RB product : complement component 1, r subcomponent protein_id : NP_075632.2

name	C1s (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450097 GeneID:50908 MGI:1355312
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0003816 - complement component C1s activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : serine protease; complement component C1SA product : complement component 1, s subcomponent protein_id : NP_659187.1

name	LOC667277 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94378099 GeneID:667277
definition	codon_start : 1 product : similar to complement component C1rb isoform 2 protein_id : XP_001002804.1

name	LOC626436 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626436
definition	number : 1 pseudo : _no_value

name	LOC100043511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043511
definition	number : 3 pseudo : _no_value

name	LOC100043511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043511
definition	number : 2 pseudo : _no_value

name	LOC100043511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043511
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps32 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043512
definition	number : 1 pseudo : _no_value

name	LOC623282 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623282
definition	number : 5 pseudo : _no_value

name	LOC623282 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623282
definition	number : 4 pseudo : _no_value

name	LOC623282 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623282
definition	number : 3 pseudo : _no_value

name	LOC623282 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623282
definition	number : 2 pseudo : _no_value

name	LOC623282 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623282
definition	number : 1 pseudo : _no_value

name	Vmn2r-ps34 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623337
definition	number : 6 pseudo : _no_value

name	Vmn2r-ps34 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623337
definition	number : 5 pseudo : _no_value

name	Vmn2r-ps34 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623337
definition	number : 4 pseudo : _no_value

name	Vmn2r-ps34 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623337
definition	number : 3 pseudo : _no_value

name	Vmn2r-ps34 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623337
definition	number : 2 pseudo : _no_value

name	Vmn2r-ps34 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623337
definition	number : 1 pseudo : _no_value

name	Vmn2r27 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:232367
definition	number : 6 pseudo : _no_value

name	Vmn2r27 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:232367
definition	number : 5 pseudo : _no_value

name	Vmn2r27 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:232367
definition	number : 4 pseudo : _no_value

name	Vmn2r27 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:232367
definition	number : 3 pseudo : _no_value

name	Vmn2r27 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:232367
definition	number : 2 pseudo : _no_value

name	Vmn2r27 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:232367
definition	number : 1 pseudo : _no_value

name	LOC100043530 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043530
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:498798
definition	standard_name : Nanog

name	(CDS detail)
type	STS
link
xref	UniSTS:163064
definition	standard_name : RH126356

name	(CDS detail)
type	STS
link
xref	UniSTS:124798
definition	standard_name : D19270

name	(CDS detail)
type	STS
link
xref	UniSTS:161573
definition	standard_name : RH124751

name	(CDS detail)
type	STS
link
xref	UniSTS:159568
definition	standard_name : AU040424

name	(CDS detail)
type	STS
link
xref	UniSTS:235551
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162343
definition	standard_name : RH125527

name	(CDS detail)
type	STS
link
xref	UniSTS:235552
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:125668
definition	standard_name : U11853

name	(CDS detail)
type	STS
link
xref	UniSTS:271942
definition	standard_name : PMC20520P1

name	(CDS detail)
type	STS
link
xref	UniSTS:144424
definition	standard_name : Slc2a3

name	(CDS detail)
type	STS
link
xref	UniSTS:144425
definition	standard_name : Slc2a3

name	(CDS detail)
type	STS
link
xref	UniSTS:144426
definition	standard_name : Slc2a3

name	(CDS detail)
type	STS
link
xref	UniSTS:130697
definition	standard_name : D6Mit151

name	(CDS detail)
type	STS
link
xref	UniSTS:144729
definition	standard_name : Umpk

name	(CDS detail)
type	STS
link
xref	UniSTS:208029
definition	standard_name : AU022706

name	(CDS detail)
type	STS
link
xref	UniSTS:159569
definition	standard_name : AF053757

name	(CDS detail)
type	STS
link
xref	UniSTS:164679
definition	standard_name : C3ar1

name	(CDS detail)
type	STS
link
xref	UniSTS:179457
definition	standard_name : AI747569

name	(CDS detail)
type	STS
link
xref	UniSTS:16987
definition	standard_name : D12S1331

name	(CDS detail)
type	STS
link
xref	UniSTS:130851
definition	standard_name : D6Mit300

name	(CDS detail)
type	STS
link
xref	UniSTS:235554
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:209815
definition	standard_name : RH127282

name	(CDS detail)
type	STS
link
xref	UniSTS:159567
definition	standard_name : C86253

name	(CDS detail)
type	STS
link
xref	UniSTS:142950
definition	standard_name : EC19AR

name	(CDS detail)
type	STS
link
xref	UniSTS:142949
definition	standard_name : EC192RR

name	(CDS detail)
type	STS
link
xref	UniSTS:130661
definition	standard_name : D6Mit12

name	(CDS detail)
type	STS
link
xref	UniSTS:179461
definition	standard_name : AW212715

name	(CDS detail)
type	STS
link
xref	UniSTS:130885
definition	standard_name : D6Mit331

name	(CDS detail)
type	STS
link
xref	UniSTS:142948
definition	standard_name : EC185RR

name	(CDS detail)
type	STS
link
xref	UniSTS:130736
definition	standard_name : D6Mit193.2

name	(CDS detail)
type	STS
link
xref	UniSTS:130735
definition	standard_name : MT2734

name	(CDS detail)
type	STS
link
xref	UniSTS:123548
definition	standard_name : 21.MMHAP9FRG9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:191632
definition	standard_name : fb81e07.x1

name	(CDS detail)
type	STS
link
xref	UniSTS:159571
definition	standard_name : AI132558

name	(CDS detail)
type	STS
link
xref	UniSTS:149354
definition	standard_name : D3S2327

name	(CDS detail)
type	STS
link
xref	UniSTS:149354
definition	standard_name : D3S2327

name	(CDS detail)
type	STS
link
xref	UniSTS:130890
definition	standard_name : D6Mit336

name	(CDS detail)
type	STS
link
xref	UniSTS:179467
definition	standard_name : AI327365

name	(CDS detail)
type	STS
link
xref	UniSTS:159570
definition	standard_name : AA959438

name	(CDS detail)
type	STS
link
xref	UniSTS:210016
definition	standard_name : RH136020

name	(CDS detail)
type	STS
link
xref	UniSTS:164678
definition	standard_name : C1s

name	EG667107 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255414 GeneID:667107 MGI:3646670
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 632 ESTs, 5 Proteins product : predicted gene, EG667107 pseudo : _no_value transcript_id : XR_001974.2

name	LOC384484 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255316 GeneID:384484
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : similar to synaptotagmin binding, cytoplasmic RNA interacting protein pseudo : _no_value transcript_id : XR_034646.1

name	EG622297 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149255322 GeneID:622297 MGI:3648854
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : predicted gene, EG622297 pseudo : _no_value transcript_id : XR_034651.1

clone name	MSMg01-328C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309C03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-293L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372L04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-288A05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-380L22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-197M10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-312C05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-360A21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-441I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526L13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-338J02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-110E07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-157M09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174J15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-171H13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-108H17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-053B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110E07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-388B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-518E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138C02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-325K13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-387A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324P15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-411F13
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-349E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-255P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013H03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162M10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-278P15.b	B6Ng01-278P15.g
ACC	GA079077	GA079078
length	796	221
definition	B6Ng01-278P15.b	B6Ng01-278P15.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(123,561,746 - 123,562,435)	(127,285,815 - 127,285,852)
sequence	gaattccataaaactcttcactgaattctaaattttattgttggaaaaat aattttgcacttaattttcaacatacatttattatatacatttatgtttt tgaggtatctgtactttcacagaaaaatttagtaagtttcttcacatagt gtccctttttaaaaagatacaagtagaggtaagtctttgaatatttaaga caaatccagtggaatagaaagccttattcactaatcttatacttcattta ctctgaaggacacttgtataggaccaaactttaatagggaatatgattat agcaagtcactgtattacatatctgtaactctcataatgaggagacagaa ataggaggattactagccagtcttgtctacataccacattcccagccagc caggatttcatagtgaggccttgcttcaaaaggaaagaaaagaaaaggaa aggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaa aggaaaggaaaggatgaaaggaaaggaaaggaaaggaaaggaaaggaaag gaaaggaaaggaaaggataggatgaaaggaaaggaaaggaaaggaaagga aaggaaaggaaaggaaaggaaaggaagggaaaaagggaataaagggggaa aaggaaaaaagggggaaagggaaaaaaggggaaaaggagaaaaaagggaa agggggggaaagggcaaaaaaggaaaaagaagggaaaaggggaaaagggg aaaagggcaaagggcaaaaagggcaaaaagagcaggaaaggaaagg	agcatgagttggggagagacacacagagagccaatcatggctgagtagct attagcatttggtggctaatgggaaagggagagtcagtttccttaggaga tttatcctagtagcttgtccagactccagattatgtcctatcctcctgcg gtactgtcatgcctaaatgaaaccagtaggttaaaacatgagagagagag agagagagaggggggggggga
quality values	Open. Hide. 62 41 27 26 62 62 22 13 62 62 62 62 62 62 54 62 62 62 37 32 62 62 62 49 62 62 62 62 62 62 62 51 56 48 32 27 48 49 62 54 62 54 54 62 62 62 62 54 56 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 49 62 62 59 62 62 62 62 62 62 54 62 62 54 62 62 62 62 62 62 59 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 49 54 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 49 49 58 58 58 58 58 58 58 58 47 58 58 49 49 39 58 58 58 58 58 58 58 58 58 49 58 58 58 58 58 58 49 41 49 58 58 58 49 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 49 58 58 58 58 41 53 48 41 47 47 58 58 38 51 51 50 48 44 58 58 49 58 58 58 58 58 58 58 58 58 58 58 49 58 58 41 39 49 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 39 43 43 29 33 36 58 49 33 43 25 39 54 39 51 54 50 43 43 58 58 58 58 28 49 46 38 46 54 54 49 49 54 51 54 46 34 54 39 49 46 54 54 51 54 54 54 51 40 54 54 54 50 54 54 53 54 51 51 54 51 54 44 46 54 46 49 21 54 47 51 47 44 44 41 37 44 42 51 41 38 32 40 37 47 51 44 42 42 33 44 46 46 33 51 47 36 32 25 18 21 15 32 23 31 32 28 49 38 40 49 40 34 32 21 18 15 27 15 30 16 25 33 33 32 40 31 40 40 18 32 21 17 30 19 41 30 46 40 31 46 30 33 31 27 17 18 23 19 22 24 32 25 40 31 35 31 10 11 12 14 29 13 51 26 40 40 32 19 26 24 28 13 41 28 22 36 32 26 25 37 18 20 20 18 13 16 12 26 29 24 32 36 22 18 29 41 29 36 36 32 25 9 37 22 24 26 16 22 15 23 13 37 23 22 26 30 24 18 19 23 19 10 29 12 21 31 18 37 37 39 26 24 31 25 14 33	Open. Hide. 22 59 62 59 59 59 59 46 42 59 62 49 49 42 62 62 62 62 49 43 59 62 59 62 59 62 62 62 62 59 62 59 51 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 59 59 62 62 59 62 62 62 59 59 62 59 62 62 62 62 59 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 46 62 62 62 62 62 56 50 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_123561746_123562435
seq2: B6Ng01-278P15.b_48_843

seq1  GAATTCCATAAAACTCTTCACTGAATTCTAAATTTTATTGTTGGAAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAAACTCTTCACTGAATTCTAAATTTTATTGTTGGAAAAAT  50

seq1  AATTTTGCACTTAATTTTCAACATACATTTATTATATACATTTATGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGCACTTAATTTTCAACATACATTTATTATATACATTTATGTTTT  100

seq1  TGAGGTATCTGTACTTTCACAGAAAAATTTAGTAAGTTTCTTCACATAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATCTGTACTTTCACAGAAAAATTTAGTAAGTTTCTTCACATAGT  150

seq1  GTCCCTTTTTAAAAAGATACAAGTAGAGGTAAGTCTTTGAATATTTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTTTTAAAAAGATACAAGTAGAGGTAAGTCTTTGAATATTTAAGA  200

seq1  CAAATCCAGTGGAATAGAAAGCCTTATTCACTAATCTTATACTTCATTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCAGTGGAATAGAAAGCCTTATTCACTAATCTTATACTTCATTTA  250

seq1  CTCTGAAGGACACTTGTATAGGACCAAACTTTAATAGGGAATATGATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAGGACACTTGTATAGGACCAAACTTTAATAGGGAATATGATTAT  300

seq1  AGCAAGTCACTGTATTACATATCTGTAACTCTCATAATGAGGAGACAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCACTGTATTACATATCTGTAACTCTCATAATGAGGAGACAGAA  350

seq1  ATAGGAGGATTACTAGCCAGTCTTGTCTACATACCACATTCCCAGCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGGATTACTAGCCAGTCTTGTCTACATACCACATTCCCAGCCAGC  400

seq1  CAGGATTTCATAGTGAGGCCTTGCTTCAAAAGGAAAGAAAAGAAAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTTCATAGTGAGGCCTTGCTTCAAAAGGAAAGAAAAGAAAAGGAA  450

seq1  AGGAAAGGAAAGGAAAG---------------------------------  467
      |||||||||||||||||                                 
seq2  AGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAA  500

seq1  --------------------------------------------------  467
                                                        
seq2  AGGAAAGGAAAGGATGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAG  550

seq1  -----------------------GAAAGGAAAGGAAAGGAAAGGAAAGGA  494
                             |||||||||||||||||||||||||||
seq2  GAAAGGAAAGGAAAGGATAGGATGAAAGGAAAGGAAAGGAAAGGAAAGGA  600

seq1  AAGGAAAGGAAAGGAAAGGAAAGGAAGGGAAAAAGGGAATAAAGGGGGAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGGAAAGGAAAGGAAAGGAAGGGAAAAAGGGAATAAAGGGGGAA  650

seq1  AAGGAAAAAAGGGGGAAAGGGAAAAAAGGGGAAAAGGAGAAAAAAGGGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAAAGGGGGAAAGGGAAAAAAGGGGAAAAGGAGAAAAAAGGGAA  700

seq1  A-GGGGGGAAAGGGCAAAAAAGGAAAAAGAAGGGAAAAGGGGAAAAGGGG  643
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGGGAAAGGGCAAAAAAGGAAAAAGAAGGGAAAAGGGGAAAAGGGG  750

seq1  AAAAGGGCAAAAGGGCAAAAAGGGCAAAAAGAGCAGGAAAGGAAAGG  690
      |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGC-AAAGGGCAAAAAGGGCAAAAAGAGCAGGAAAGGAAAGG  796

seq1: chr1_127285815_127285852
seq2: B6Ng01-278P15.g_253_290 (reverse)

seq1  TCCCCCCCCCCCGTCTCTCTCTCTCTCTCTCTC-TGTTT  38
      |||||||||||| |||||||||||||||||||| |||||
seq2  TCCCCCCCCCCC-TCTCTCTCTCTCTCTCTCTCATGTTT  38

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information