BAC Information

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BAC

Clone NameB6Ng01-280P13
Chromosome6 (Build37)
Map Location 74,083,784 - 74,274,845
singlet/doubletdoublet
Overlap genenone
Upstream geneDnahc6, Suclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
Downstream geneEG668132, LOC668136, LOC621306
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280P13.bB6Ng01-280P13.g
ACCGA080569GA080570
length9641,068
definitionB6Ng01-280P13.b B6Ng01-280P13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,274,321 - 74,274,845)(74,083,784 - 74,084,847)
sequence
gaattcaaaggattctaaagcacagatttgaacagatcacgtacctctga
tgacttcagctatgtttttttttttctgtttgaatgtgagaaaatcattc
aaaattacctaaaaaggcttagccattaagtaaagaccacactgggttca
cttgctttttgagggaagtctgttttataaagagatgaatttcctagcac
aattaagaaatattcactcactccttaggatctgggaagaagctatgaac
atagtggagcgtgtatgtgtccttgatatatgttggagaatattttgggt
atatgcctaggattaatatagctgggttcttaggtagtgctatgttcagt
tttctgaggaactgccagacttatttccagagtgtttgtaccagcttgca
atcccaccagcaatggaggagtgttcctctttcttacattcttgccatca
cctgagttttttaccttagtcattctgactggtatgaggtagagtctctg
gttgttttgactttcattttcctgataactaaggatgttgaacatttctt
taggtgcctctcagtcattagagattcctcagttgacaattcattgttat
gctctgtacctcattttaatggggttctctggggttcaacttcttgagtt
cttttaattagccctctatcagatgtagggttggtaaagattttttccca
ttctgtagttttctgtttggtcctattgacagtgccctttgccttgcaga
aagcttttcaattatatgagatctcaattgtctatggttgatcttacagc
ctgagcatttggtgttcttttcaggaaatttttacctgttctgctctggt
tccaggctctttctcactttctcctctattggattcagtgtatgatttta
tgtggaggtccttgatagattgggacttttagcttttgtaccaaggaaga
taaaaaatggatca

gaattctaattaaaatatattaaataattaaaattaacattcatctgaag
gtgtatttttttattaattttatcttaaaagctttgacatattgagtcac
atcagttcaggccagctccttatatctgatgaacttgtttagtcaatttt
ggttattaagtgcagaaaacctttagaaaacaaattaatttgacttcatg
tacttcataatatttttgggaagtacttgccagcatgtaactagacgtta
agatatggatatagatatgcagtaactttctacaagagaaataaaatata
gttatttttatgccatgatatatgaaagttgatatattataattaaagta
ggtagattacagaggtacattagagaacatattctgcaaatataaaacat
gacatagaaaaggatttgggggacagaagaaatagttatgatataatagt
atgtctaatcgaaatatattatttatgcaaggaagaaatatgtgaaatct
ttccaaatgaaaaaaccagaaaaatttaaaacaattttgactgttcaatt
ttctcttctgcacattttctaaattcattatgagtatgagtccacagcct
ttcaaaaatgaaaatgtccagttatttttagtagccattatctgggatgt
aataccaatgaggcaaaatgtggaactatatttaatcttttaagaactta
caggatcagagatatggtgaggaatgaaaaaattcaataattagaactca
aacatccatttagtgttgtacaaatacatacagtgtattggctacttgtc
agttgcacaggcatgagaaagctgttgttttgggtggtgttaaactaaaa
gcacaatttgacttcagagggagtgatgaagcacaggactaaagctacca
ttggttttgcttttcattattccagttacctagaccattcaatcattata
aaacatgcttttccaattatttttaatggtacttaaagcaaattgatttg
acattaaggaaaatattgtttaggggagaagctatatatttacaggggtt
aaataactagctttgtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_74274321_74274845
seq2: B6Ng01-280P13.b_46_571 (reverse)

seq1  ATCAGGAAAATGAAAGTCAAAACAACCAGAGACTCTACCTCATACCAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAAAATGAAAGTCAAAACAACCAGAGACTCTACCTCATACCAGTC  50

seq1  AGAATGACTAAGGTAAAAAACTCAGGTGATGGCAAGAATGTAAGAAAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACTAAGGTAAAAAACTCAGGTGATGGCAAGAATGTAAGAAAGAG  100

seq1  GAACACTCCTCCATTGCTGGTGGGATTGCAAGCTGGTACAAACACTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTCCTCCATTGCTGGTGGGATTGCAAGCTGGTACAAACACTCTGG  150

seq1  AAATAAGTCTGGCAGTTCCTCAGAAAACTGAACATAGCACTACCTAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGTCTGGCAGTTCCTCAGAAAACTGAACATAGCACTACCTAAGAA  200

seq1  CCCAGCTATATTAATCCTAGGCATATACCCAAAATATTCTCCAACATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTATATTAATCCTAGGCATATACCCAAAATATTCTCCAACATATA  250

seq1  TCAAGGACACATACACGCTCCACTATGTTCATAGCTTCTTCCCAGATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGACACATACACGCTCCACTATGTTCATAGCTTCTTCCCAGATCCT  300

seq1  AAGGAGTGAGTGAATATTTCTTAATTGTGCTAGGAAATTCATCTCTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTGAGTGAATATTTCTTAATTGTGCTAGGAAATTCATCTCTTTAT  350

seq1  AAAACAGACTTCCCTCAAAAAGCAAGTGAACCCAGTGTGGTCTTTACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGACTTCCCTCAAAAAGCAAGTGAACCCAGTGTGGTCTTTACTTA  400

seq1  ATGGCTAAGCCTTTTTAGGTAATTTTGAATGATTTTCTCACATTCAAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAGCCTTTTTAGGTAATTTTGAATGATTTTCTCACATTCAAACA  450

seq1  GAAAAAAAAAAACATAGCTGAAGTCATCAGAGGTACGTGATCTGTTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAAACATAGCTGAAGTCATCAGAGGTACGTGATCTGTTCAAA  500

seq1  TCTGTGCTTTAGAAT-CTTTGAATTC  525
      ||||||||||||||| ||||||||||
seq2  TCTGTGCTTTAGAATCCTTTGAATTC  526


seq1: chr6_74083784_74084847
seq2: B6Ng01-280P13.g_67_1134

seq1  GAATTCTAATTAAAATATATTAAATAATTAAAATTAACATTCATCTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAATTAAAATATATTAAATAATTAAAATTAACATTCATCTGAAG  50

seq1  GTGTATTTTTTTATTAATTTTATCTTAAAAGCTTTGACATATTGAGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTTTTTTATTAATTTTATCTTAAAAGCTTTGACATATTGAGTCAC  100

seq1  ATCAGTTCAGGCCAGCTCCTTATATCTGATGAACTTGTTTAGTCAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTCAGGCCAGCTCCTTATATCTGATGAACTTGTTTAGTCAATTTT  150

seq1  GGTTATTAAGTGCAGAAAACCTTTAGAAAACAAATTAATTTGACTTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATTAAGTGCAGAAAACCTTTAGAAAACAAATTAATTTGACTTCATG  200

seq1  TACTTCATAATATTTTTGGGAAGTACTTGCCAGCATGTAACTAGACGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATAATATTTTTGGGAAGTACTTGCCAGCATGTAACTAGACGTTA  250

seq1  AGATATGGATATAGATATGCAGTAACTTTCTACAAGAGAAATAAAATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGGATATAGATATGCAGTAACTTTCTACAAGAGAAATAAAATATA  300

seq1  GTTATTTTTATGCCATGATATATGAAAGTTGATATATTATAATTAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTATGCCATGATATATGAAAGTTGATATATTATAATTAAAGTA  350

seq1  GGTAGATTACAGAGGTACATTAGAGAACATATTCTGCAAATATAAAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGATTACAGAGGTACATTAGAGAACATATTCTGCAAATATAAAACAT  400

seq1  GACATAGAAAAGGATTTGGGGGACAGAAGAAATAGTTATGATATAATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGAAAAGGATTTGGGGGACAGAAGAAATAGTTATGATATAATAGT  450

seq1  ATGTCTAATCGAAATATATTATTTATGCAAGGAAGAAATATGTGAAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTAATCGAAATATATTATTTATGCAAGGAAGAAATATGTGAAATCT  500

seq1  TTCCAAATGAAAAAACCAGAAAAATTTAAAACAATTTTGACTGTTCAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAATGAAAAAACCAGAAAAATTTAAAACAATTTTGACTGTTCAATT  550

seq1  TTCTCTTCTGCACATTTTCTAAATTCATTATGAGTATGAGTCCACAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTCTGCACATTTTCTAAATTCATTATGAGTATGAGTCCACAGCCT  600

seq1  TTCAAAAATGAAAATGTCCAGTTATTTTTAGTAGCCATTATCTGGGATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAAATGAAAATGTCCAGTTATTTTTAGTAGCCATTATCTGGGATGT  650

seq1  AATACCAATGAGGCAAAATGTGGAACTATATTTAATCTTTTAAGAAACTT  700
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATACCAATGAGGCAAAATGTGGAACTATATTTAATCTTTTAAG-AACTT  699

seq1  ACAGGATCAGAGATATGGTGAGGAATGAAAAAATTCAATAATTAGAACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATCAGAGATATGGTGAGGAATGAAAAAATTCAATAATTAGAACTC  749

seq1  AAACATCCATTTAGTGTTGTACAAATACATACAGTGTATTGGCTACTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCCATTTAGTGTTGTACAAATACATACAGTGTATTGGCTACTTGT  799

seq1  CAGTTGCACAGGCATGAGAAAGCTGTTGTTTTGGGTGGTGTTAAACTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCACAGGCATGAGAAAGCTGTTGTTTTGGGTGGTGTTAAACTAAA  849

seq1  AGCACAA-TTGACTTCAGAGGGAGTGATGAAGCACAGGACTAAAGCTACC  899
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAATTTGACTTCAGAGGGAGTGATGAAGCACAGGACTAAAGCTACC  899

seq1  ATTGGTTTTGC-TTTCATTATTCCAGTTACCTAGACCATTCAATCAATTA  948
      ||||||||||| ||||||||||||||||||||||||||||||||| ||||
seq2  ATTGGTTTTGCTTTTCATTATTCCAGTTACCTAGACCATTCAATC-ATTA  948

seq1  TAAAACATGCTTTTCC-ATTATTTTTA--TGTACTTAAAAGCAAATGATT  995
      |||||||||||||||| ||||||||||   |||||| |||||||||   |
seq2  TAAAACATGCTTTTCCAATTATTTTTAATGGTACTT-AAAGCAAATTGAT  997

seq1  TTGACA-TAAGGAAAATAATTGTTTAGGGGAGAAGC--TATATTTACAGG  1042
      |||||| |||||||||| ||||||||||||||||||  ||||||||||||
seq2  TTGACATTAAGGAAAAT-ATTGTTTAGGGGAGAAGCTATATATTTACAGG  1046

seq1  GGTTAAATAACTTAGC-TTGTCA  1064
      ||||||||||| |||| ||||||
seq2  GGTTAAATAAC-TAGCTTTGTCA  1068


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