BAC Information

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BAC

Clone NameB6Ng01-282M19
Chromosome6 (Build37)
Map Location 109,388,965 - 109,390,046
singlet/doubletsinglet
Overlap genenone
Upstream geneItpr1, LOC677205, Bhlhb2, Arl8b, Edem1, EG627371, LOC639110
Downstream geneLOC100043720
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282M19.bB6Ng01-282M19.g
ACCGA081920GA081921
length1,084285
definitionB6Ng01-282M19.b B6Ng01-282M19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcctgattcaactttgcctgcttcttaagagctaggattaca
gacatccacaaacatgacaggttaaatattttaactgtcagaatacattc
tattttctatcaagagcagcatgctctgaagtacatgcacatcacccagc
ttacaaaggtcaagtcttgcttattagtaaatgaatcctctcttacactc
attatggaaacttctacatccatcagcagtgaggacaaagccccacagat
atgagcacagcaagattaatcaagacaattcttcagttgaggttccttct
ttccaggtaactccaagatgtaccaacttgacataaaatattaaccagga
tgaatatgatgcaccaaactcactgctgatatatgctaaagactataaaa
taagtatatggaaaaatacctcaatattactgaggcattatttacaggag
cctgtaatatggaagcttgacacaaagctgaactttactatatcctgaga
tctttgctatcatgttgagggctggtgtggacttacataacggttttgtg
tatcctgaagcaatcagtgacaaagaagcctgctttcgttttcattctgt
ttcaccaagtcataaagaaaataagctttttaagccctgtcactctatga
tccagaggaataaagaacccaattaatatgagctattcagtgcatgtaaa
aagtagaaaattcatggtcctgaaagccaaggtctttgacaatatcagca
tatacaggagggtctcttgtgtccatcagtgcttcctctttagaagaaca
ggaagtaggtttaagagccagccttccaaaatagctaaccatcttgattg
aagcacagagttaaccattacaagagcaaatatgaaaatgacagtaatat
atcctttaagagaccgctgtctacgtgccaggtgctggatactctatgtg
ttatattattcctcaccacatccctaggaggcacaaattgtagctatcct
atttttacatatttagaaactatcccaagcctgtgaaacttcaatctaga
gtttaagttccaaccttggtgcttttctctccca

gaattctcagtataggaagctcgaatcgcttagaagctcttaaagaagca
ttcgaagtgcttagtcatcaaggaaatgcaaatcaaaacatctctgaagt
tccatctttttttaaaaatattttttattattacgtattttcctcaatta
catttagagatctgcaaccctgtaggtgcaacaacattatgaactaacca
gtaccccggagctcttgactctagctgcatatgtatcaaaagacggccta
gtcggtcatcactggaaagagaggcccattggaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_109388965_109390046
seq2: B6Ng01-282M19.b_51_1134 (reverse)

seq1  TGGGAG---AAAGCACAAGGTTTGGAACTAAAACTCTAGATTTGAAGTTT  47
      ||||||   ||||||| | | |||||||| |||||||||| |||||||||
seq2  TGGGAGAGAAAAGCACCAAGGTTGGAACTTAAACTCTAGA-TTGAAGTTT  49

seq1  CACAGGCTTGGGAATAGTTTCTAAATATGT-AAAATAGGATAGCTACAAT  96
      |||||||||||| ||||||||||||||||| |||||||||||||||||||
seq2  CACAGGCTTGGG-ATAGTTTCTAAATATGTAAAAATAGGATAGCTACAAT  98

seq1  TTGTGCCTCCTAGGGATGTGGTGAGGAATAATATAACACATAGAGTATCC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCCTCCTAGGGATGTGGTGAGGAATAATATAACACATAGAGTATCC  148

seq1  AGCACCTGGCACGTAGACAGCGGTCTCTTAAAGGATATATTACTGTCATT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTGGCACGTAGACAGCGGTCTCTTAAAGGATATATTACTGTCATT  198

seq1  TTCATATTTGCTCTTGTAATGGTTAACTCTGTGCTTCAATCAAGATGGTT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTGCTCTTGTAATGGTTAACTCTGTGCTTCAATCAAGATGGTT  248

seq1  AGCTATTTTGGAAGGCTGGCTCTTAAACCTACTTCCTGTTCTTCTAAAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATTTTGGAAGGCTGGCTCTTAAACCTACTTCCTGTTCTTCTAAAGA  298

seq1  GGAAGCACTGATGGACACAAGAGACCCTCCTGTATATGCTGATATTGTCA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCACTGATGGACACAAGAGACCCTCCTGTATATGCTGATATTGTCA  348

seq1  AAGACCTTGGCTTTCAGGACCATGAATTTTCTACTTTTTACATGCACTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTTGGCTTTCAGGACCATGAATTTTCTACTTTTTACATGCACTGA  398

seq1  ATAGCTCATATTAATTGGGTTCTTTATTCCTCTGGATCATAGAGTGACAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTCATATTAATTGGGTTCTTTATTCCTCTGGATCATAGAGTGACAG  448

seq1  GGCTTAAAAAGCTTATTTTCTTTATGACTTGGTGAAACAGAATGAAAACG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAAAAAGCTTATTTTCTTTATGACTTGGTGAAACAGAATGAAAACG  498

seq1  AAAGCAGGCTTCTTTGTCACTGATTGCTTCAGGATACACAAAACCGTTAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGGCTTCTTTGTCACTGATTGCTTCAGGATACACAAAACCGTTAT  548

seq1  GTAAGTCCACACCAGCCCTCAACATGATAGCAAAGATCTCAGGATATAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCCACACCAGCCCTCAACATGATAGCAAAGATCTCAGGATATAGT  598

seq1  AAAGTTCAGCTTTGTGTCAAGCTTCCATATTACAGGCTCCTGTAAATAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCAGCTTTGTGTCAAGCTTCCATATTACAGGCTCCTGTAAATAAT  648

seq1  GCCTCAGTAATATTGAGGTATTTTTCCATATACTTATTTTATAGTCTTTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGTAATATTGAGGTATTTTTCCATATACTTATTTTATAGTCTTTA  698

seq1  GCATATATCAGCAGTGAGTTTGGTGCATCATATTCATCCTGGTTAATATT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATATCAGCAGTGAGTTTGGTGCATCATATTCATCCTGGTTAATATT  748

seq1  TTATGTCAAGTTGGTACATCTTGGAGTTACCTGGAAAGAAGGAACCTCAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCAAGTTGGTACATCTTGGAGTTACCTGGAAAGAAGGAACCTCAA  798

seq1  CTGAAGAATTGTCTTGATTAATCTTGCTGTGCTCATATCTGTGGGGCTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGAATTGTCTTGATTAATCTTGCTGTGCTCATATCTGTGGGGCTTT  848

seq1  GTCCTCACTGCTGATGGATGTAGAAGTTTCCATAATGAGTGTAAGAGAGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCACTGCTGATGGATGTAGAAGTTTCCATAATGAGTGTAAGAGAGG  898

seq1  ATTCATTTACTAATAAGCAAGACTTGACCTTTGTAAGCTGGGTGATGTGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTACTAATAAGCAAGACTTGACCTTTGTAAGCTGGGTGATGTGC  948

seq1  ATGTACTTCAGAGCATGCTGCTCTTGATAGAAAATAGAATGTATTCTGAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTTCAGAGCATGCTGCTCTTGATAGAAAATAGAATGTATTCTGAC  998

seq1  AGTTAAAATATTTAACCTGTCATGTTTGTGGATGTCTGTAATCCTAGCTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAATATTTAACCTGTCATGTTTGTGGATGTCTGTAATCCTAGCTC  1048

seq1  TTAAGAAGCAGGCAAAGTTGAATCAGGATAGAATTC  1082
      ||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGCAGGCAAAGTTGAATCAGGATAGAATTC  1084


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