BAC Information

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BAC

Clone NameB6Ng01-285G03
Chromosome6 (Build37)
Map Location 145,635,497 - 145,824,308
singlet/doubletdoublet
Overlap geneRassf8, Bhlhb3
Upstream gene4933425H06Rik, EG665149, Bcat1, Lrmp, Casc1, Lyrm5, Kras, LOC100039495, LOC100042866, LOC546917, 1700073E17Rik, Ifltd1, LOC100042879, Tuba3b
Downstream geneSspn, Itpr2, 4933424B01Rik, Fgfr1op2, Tm7sf3, Surb7, EG626175, Stk38l, LOC621842, Arntl2, 1700023A16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285G03.bB6Ng01-285G03.g
ACCGA083846GA083847
length3081,041
definitionB6Ng01-285G03.b B6Ng01-285G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,824,001 - 145,824,308)(145,635,497 - 145,636,523)
sequence
agaaactggaaaagcttgtgaaggcccgagatagaaagagtgggatacct
taagaaaaggagcaaaaagagtacaatgttggggtgtcggggggagatga
gagaagtgaggctgaagaggcagaggccgctacagtgtccttcaggccac
tggagagcaagtgtctgtttttattttgacttggtggaaatgggaatctg
ttagaattttgattaagagaaccaagtgtactgaaaatggtttttctggc
taaaatccagtgagtaggattggtgtgggggcaagacaaggtcggtgtgg
gggggggg
gaattccacaggacactagtgaaagagagtatatagggagagtggaaacc
ctgagagactcccagctgaccgtgctccaggcccaggttcagctgggagt
ccagttgctgggagtgggttcctcactggtgctgggcaggtcatttccta
ggaatctcatgcccattgtctcaagtccactccaccaaactgcaggttga
cttctccagaaagcagaagctaatctaagattgctgtgcacgcatgctac
agagagtctgtgggggtttgagaaaattgtgcagggacctcctaggcttg
gcgttgccgctaaagctagtgggcgtggcctctaaggctagcaggcgtgg
cctctaaggctagtgggtgagcggctttctactgagcatctcactggtcc
tcttcctttgttttgtttgctttgttttgttttaaatcttccaattcctt
ccaaagacactgtaacctaacttcaaagtcttcctttgaagttagaaatt
ttgtagcttgggcaaggttaccactctctcatctttgtatgtcctagcat
tgaatgaacattttcctagcaagcacttatgggagagagttccttctgtc
ttaaaattgtagttttatctaagttagatacctctgccttcctatgacct
tttaaaaattatttttctatagtttctgtgcatcaatttcaactgcctcc
ctgtgttctttcgtacattctgattattgtctttttcttttctctcctcc
ctccctccctcctctgcctcttctctctctctctgtctctctgtctctct
gtctctgtctctctctctctcacacacatgtttttccccccatgttcttc
tatcactatgtacaaagagatatccttacagtgacggtttcacacacaca
cacacatatcattccggctttggtcttttctcctcgtgtcccctctttcc
ctttctttccagaaaaaataccacccccccccccaaaatattgttaaccc
atgcaagaccaatttttctaacttcacaaggattcatttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_145824001_145824308
seq2: B6Ng01-285G03.b_51_358 (reverse)

seq1  CCCCCCCCCCACACCGACCTTGTCTTGCCCCCACACCAATCCTACTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACACCGACCTTGTCTTGCCCCCACACCAATCCTACTCACT  50

seq1  GGATTTTAGCCAGAAAAACCATTTTCAGTACACTTGGTTCTCTTAATCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTAGCCAGAAAAACCATTTTCAGTACACTTGGTTCTCTTAATCAA  100

seq1  AATTCTAACAGATTCCCATTTCCACCAAGTCAAAATAAAAACAGACACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAACAGATTCCCATTTCCACCAAGTCAAAATAAAAACAGACACTT  150

seq1  GCTCTCCAGTGGCCTGAAGGACACTGTAGCGGCCTCTGCCTCTTCAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCCAGTGGCCTGAAGGACACTGTAGCGGCCTCTGCCTCTTCAGCCT  200

seq1  CACTTCTCTCATCTCCCCCCGACACCCCAACATTGTACTCTTTTTGCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCTCATCTCCCCCCGACACCCCAACATTGTACTCTTTTTGCTCC  250

seq1  TTTTCTTAAGGTATCCCACTCTTTCTATCTCGGGCCTTCACAAGCTTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAAGGTATCCCACTCTTTCTATCTCGGGCCTTCACAAGCTTTTC  300

seq1  CAGTTTCT  308
      ||||||||
seq2  CAGTTTCT  308

seq1: chr6_145635497_145636523
seq2: B6Ng01-285G03.g_65_1105

seq1  GAATTCCACAGGACACTAGTGAAAGAGAGTATATAGGGAGAGTGGAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGGACACTAGTGAAAGAGAGTATATAGGGAGAGTGGAAACC  50

seq1  CTGAGAGACTCCCAGCTGACCGTGCTCCAGGCCCAGGTTCAGCTGGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGACTCCCAGCTGACCGTGCTCCAGGCCCAGGTTCAGCTGGGAGT  100

seq1  CCAGTTGCTGGGAGTGGGTTCCTCACTGGTGCTGGGCAGGTCATTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCTGGGAGTGGGTTCCTCACTGGTGCTGGGCAGGTCATTTCCTA  150

seq1  GGAATCTCATGCCCATTGTCTCAAGTCCACTCCACCAAACTGCAGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCATGCCCATTGTCTCAAGTCCACTCCACCAAACTGCAGGTTGA  200

seq1  CTTCTCCAGAAAGCAGAAGCTAATCTAAGATTGCTGTGCACGCATGCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAGAAAGCAGAAGCTAATCTAAGATTGCTGTGCACGCATGCTAC  250

seq1  AGAGAGTCTGTGGGGGTTTGAGAAAATTGTGCAGGGACCTCCTAGGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTCTGTGGGGGTTTGAGAAAATTGTGCAGGGACCTCCTAGGCTTG  300

seq1  GCGTTGCCGCTAAAGCTAGTGGGCGTGGCCTCTAAGGCTAGCAGGCGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTGCCGCTAAAGCTAGTGGGCGTGGCCTCTAAGGCTAGCAGGCGTGG  350

seq1  CCTCTAAGGCTAGTGGGTGAGCGGCTTTCTACTGAGCATCTCACTGGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAGGCTAGTGGGTGAGCGGCTTTCTACTGAGCATCTCACTGGTCC  400

seq1  TCTTCCTTTGTTTTGTTTGCTTTGTTTTGTTTTAAATCTTCCAATTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTGTTTTGTTTGCTTTGTTTTGTTTTAAATCTTCCAATTCCTT  450

seq1  CCAAAGACACTGTAACCTAACTTCAAAGTCTTCCTTTGAAGTTAGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACACTGTAACCTAACTTCAAAGTCTTCCTTTGAAGTTAGAAATT  500

seq1  TTGTAGCTTGGGCAAGGTTACCACTCTCTCATCTTTGTATGTCCTAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCTTGGGCAAGGTTACCACTCTCTCATCTTTGTATGTCCTAGCAT  550

seq1  TGAATGAACATTTTCCTAGCAAGCACTTATGGGAGAGAGTTCCTTCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAACATTTTCCTAGCAAGCACTTATGGGAGAGAGTTCCTTCTGTC  600

seq1  TTAAAATTGTAGTTTTATCTAAGTTAGATACCTCTGCCTTCCTATGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTGTAGTTTTATCTAAGTTAGATACCTCTGCCTTCCTATGACCT  650

seq1  TTTAAAAATTA-TTTTCTATAGTTTCTGTGCATCAATTTCAACTGCCTCC  699
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATTATTTTTCTATAGTTTCTGTGCATCAATTTCAACTGCCTCC  700

seq1  CTGTGTTC-TTCGTACATTCTGATTATTGTCTTTTTCTTTTCTCTCCTCC  748
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTCTTTCGTACATTCTGATTATTGTCTTTTTCTTTTCTCTCCTCC  750

seq1  CTCCCTCCCTCCTCTGCCTCTTCTCTCTCTCTCTGTCTCTCTGTCTCTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCCTCCTCTGCCTCTTCTCTCTCTCTCTGTCTCTCTGTCTCTCT  800

seq1  GTCTCTGTCTCTCTCTCTCTCACACACATGTTTTTCCCCCCATGTTCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTCTCTCTCTCTCTCACACACATGTTTTTCCCCCCATGTTCTTC  850

seq1  TATCACTATGTACAAAGAGATATCCTTACAGTGACGGTTTCACACACACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACTATGTACAAAGAGATATCCTTACAGTGACGGTTTCACACACACA  900

seq1  CACACATATCATT-CGGCTTTGTTCTTTTCTCCTCGTGTCCCCTCTTTCC  947
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  CACACATATCATTCCGGCTTTGGTCTTTTCTCCTCGTGTCCCCTCTTTCC  950

seq1  C-TTCCTTCCAG-AAAAATACCA-CCCCCCCCCCAAAATA-TGT--AACC  991
      | ||| |||||| |||||||||| |||||||||||||||| |||  | ||
seq2  CTTTCTTTCCAGAAAAAATACCACCCCCCCCCCCAAAATATTGTTAACCC  1000

seq1  ATGCAAGACCA--TTTTCT-ACTTCACA--GATTCATTTGA  1027
      |||||||||||  |||||| ||||||||  |||||||||||
seq2  ATGCAAGACCAATTTTTCTAACTTCACAAGGATTCATTTGA  1041