BAC Information

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BAC

Clone NameB6Ng01-287G10
Chromosome6 (Build37)
Map Location 118,483,781 - 118,628,383
singlet/doubletdoublet
Overlap geneAnkrd26, Cacna1c
Upstream geneEG640370, EG621705, LOC100043779, Zfp637, Zfp239, 4933440N22Rik, Hnrpf, Fxyd4, LOC232338, Rasgef1a, Galnact2, Ret, 1700069P05Rik, Bms1, Zfp248, Zfp9
Downstream geneDcp1b, Cacna2d4, Lrtm2, Adipor2, Wnt5b, Fbxl14, Erc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-287G10.bB6Ng01-287G10.g
ACCGA085337GA085338
length1,157629
definitionB6Ng01-287G10.b B6Ng01-287G10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,483,781 - 118,484,959)(118,627,755 - 118,628,383)
sequence
gaattcctgcttttcttaaaagctcttagttgtcattgatctctatcacg
tgacagtttagccaggatttgcgtttgacactcgagtcccacgttttgca
tattgagaaagaaaacgttacacagaattttattcttaggagttctttct
gggactgaagagatggctcggtggttaagagcactgactgctcttctatt
ggtcctgagttcaattcccagaacccacatggtggctcataaccacctgc
aatgggatccgatgccctcttctggtgtgcaaatgtacatgcaggcaaaa
tacccataaacataaataaataaatctttaaaaagagttcttactgtaag
gctgtatatttttaaaagaactttatttttaaataataaaagagtatata
caaagaaagcagttgagatcttaccagtaagaagggctttagctaatttt
aagtcactggactgtaactaagaagtaaaagctaacttactcagtgtaca
gtggacaccgtgacccagcagactcatcgtgcctactgactgactgcacc
acactggactctgtgctacacttactaaacacagattacgagggtcgtgt
tttgttttgttttttagtgttacaaagccttacctcatcacacgctaaag
agtagcttaagtcctctttctaaagatcaccaaatgatctttagagagga
ggcaaactttattaagtgccaaagtcaataaatactgattagaaaaaaga
gcaacattagttccaattataaaactataacagtgtagtcatttgtatta
agtccagttctaatacagtctcctgttcaataaagatggtggatgaagcc
atttagggtatttgccaggttctgacgatacatcaaattagaacggtaaa
gcgtatcacctagtagcccagtaccgaggcctcactgcagagctgtgatt
ctctgccaggcgatggaggtattttatatgctggctcagcgaatagttca
aagttatgttgtgggggttactgagctcccacactctgctactctgccct
cggtgctgcagtaacacacacatgtctacttgggccttttctatggatct
gcacatcgctacaggcttgctcgacctagatggactgcggatggcctcct
ttttata
gaattctgggagtgcttggaggataccaggccccccccattgaagttgct
gccaggcgatgattgggcttgaggagatcagttgattcagatcagggaaa
ggatgagactgaggaagatgggcactgacttcatacgctcagcatctgtc
ctgtgggtagcgattgctagtgtgagagatgatgcttccacagcctccgc
tgcgtgccagacagtgctctgaaatatccatacactattactattattcc
atcctaggcgaggctgagcagagggggggaccaaatgcgagagccgtatt
cagaaagaaacagggccatgatttagaccaagggcatttctggaacagcc
gtgttactgctgcctttctcgggctgtgcatttccaagaacgtttaacga
gaagcacgcatagagccttctcccatagatgctgtgaggcaagctaaata
ggaactgtttgactccagtttcccaaagctacaccactggccagaagagc
aaaggaatcccttcacttgatgccagtgcgcagcctcaggatgaaaggcc
tcttgtcgttgcctgagctcttactctctccgccttgttttctgagcaat
cctgggaaagtacggggtggggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_118483781_118484959
seq2: B6Ng01-287G10.b_42_1198

seq1  GAATTCCTGCTTTTCTTAAAAGCTCTTAGTTGTCATTGATCTCTATCACG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCTTTTCTTAAAAGCTCTTAGTTGTCATTGATCTCTATCACG  50

seq1  TGACAGTTTAGCCAGGATTTGCGTTTGACACTCGAGTCCCACGTTTTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGTTTAGCCAGGATTTGCGTTTGACACTCGAGTCCCACGTTTTGCA  100

seq1  TATTGAGAAAGAAAACGTTACACAGAATTTTATTCTTAGGAGTTCTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGAAAGAAAACGTTACACAGAATTTTATTCTTAGGAGTTCTTTCT  150

seq1  GGGACTGAAGAGATGGCTCGGTGGTTAAGAGCACTGACTGCTCTTCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTGAAGAGATGGCTCGGTGGTTAAGAGCACTGACTGCTCTTCTATT  200

seq1  GGTCCTGAGTTCAATTCCCAGAACCCACATGGTGGCTCATAACCACCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTGAGTTCAATTCCCAGAACCCACATGGTGGCTCATAACCACCTGC  250

seq1  AATGGGATCCGATGCCCTCTTCTGGTGTGCAAATGTACATGCAGGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGATCCGATGCCCTCTTCTGGTGTGCAAATGTACATGCAGGCAAAA  300

seq1  TACCCATAAACATAAATAAATAAATCTTTAAAAAGAGTTCTTACTGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCATAAACATAAATAAATAAATCTTTAAAAAGAGTTCTTACTGTAAG  350

seq1  GCTGTATATTTTTAAAAGAACTTTATTTTTAAATAATAAAAGAGTATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATATTTTTAAAAGAACTTTATTTTTAAATAATAAAAGAGTATATA  400

seq1  CAAAGAAAGCAGTTGAGATCTTACCAGTAAGAAGGGCTTTAGCTAATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAAAGCAGTTGAGATCTTACCAGTAAGAAGGGCTTTAGCTAATTTT  450

seq1  AAGTCACTGGACTGTAACTAAGAAGTAAAAGCTAACTTACTCAGTGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTGGACTGTAACTAAGAAGTAAAAGCTAACTTACTCAGTGTACA  500

seq1  GTGGACACCGTGACCCAGCAGACTCATCGTGCCTACTGACTGACTGCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACACCGTGACCCAGCAGACTCATCGTGCCTACTGACTGACTGCACC  550

seq1  ACACTGGACTCTGTGCTACACTTACTAAACACAGATTACGAGGGTCGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGACTCTGTGCTACACTTACTAAACACAGATTACGAGGGTCGTGT  600

seq1  TTTGTTTTGTTTTTTAGTGTTACAAAGCCTTACCTCATCACACGCTAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTTTAGTGTTACAAAGCCTTACCTCATCACACGCTAAAG  650

seq1  AGTAGCTTAAGTCCTCTTTCTAAAGATCACCAAATGATCTTTAGAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCTTAAGTCCTCTTTCTAAAGATCACCAAATGATCTTTAGAGAGGA  700

seq1  GGCAAACTTTATTAAGTGCCAAAGTCAATAAATACTGATTAGAAAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACTTTATTAAGTGCCAAAGTCAATAAATACTGATTAGAAAAAAGA  750

seq1  GCAACATTAGTTCCAATTATAAAACTATAACAGTGTAGTCATTTGTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATTAGTTCCAATTATAAAACTATAACAGTGTAGTCATTTGTATTA  800

seq1  AGTCCAGTTCTAATACAGTCTCCTGTTCAATAAAGATGGTGGATGAAGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGTTCTAATACAGTCTCCTGTTCAATAAAGATGGTGGATGAAGCC  850

seq1  ATTTAGGGTATTTGCCAGGTTCTGACGATACATCAAATTAGAACGGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGTATTTGCCAGGTTCTGACGATACATCAAATTAGAACGGTAAA  900

seq1  GCGTATCACCTAGTAGCCCAGTACCGAGGCCTCACTGCAGAGCTGTGATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTATCACCTAGTAGCCCAGTACCGAGGCCTCACTGCAGAGCTGTGATT  950

seq1  CTCTGCCAGGCGATGGAGGTATTTTATATGCTGGCTCAGCGAATAGTTCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCAGGCGATGGAGGTATTTTATATGCTGGCTCAGCGAATAGTTCA  1000

seq1  AAGGTTATGTTGT-GGGGTTACTGAGCTCCCACACTCTGCTACTTCTGCC  1049
      || |||||||||| ||||||||||||||||||||||||||||| |||| |
seq2  AA-GTTATGTTGTGGGGGTTACTGAGCTCCCACACTCTGCTAC-TCTG-C  1047

seq1  CCTCGGTGCTGCAGTTACCAACACACATGTCTACCTTGGGCTTTTTCTAT  1099
      ||||||||||||||| ||  ||||||||||||| ||||||| ||||||||
seq2  CCTCGGTGCTGCAGTAAC--ACACACATGTCTA-CTTGGGCCTTTTCTAT  1094

seq1  GGGAATTCTGCACATCGCCTACAGGCTGGCTCCAGACACCAAGAATGGAC  1149
      ||    ||||||||||| ||||||||| ||||     ||| || ||||||
seq2  GG---ATCTGCACATCG-CTACAGGCTTGCTC----GACCTAG-ATGGAC  1135

seq1  TGGCGGGGGATGGGCCTTCCCCTTTTTATA  1179
      |    | |||| |||||   ||||||||||
seq2  T----GCGGAT-GGCCT---CCTTTTTATA  1157

seq1: chr6_118627755_118628383
seq2: B6Ng01-287G10.g_67_695 (reverse)

seq1  CCCCACCCCCCACCCCGTACTTTCCCAGGATTGCTCAGAAAACAAGGCGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCCCACCCCGTACTTTCCCAGGATTGCTCAGAAAACAAGGCGG  50

seq1  AGAGAGTAAGAGCTCAGGCAACGACAAGAGGCCTTTCATCCTGAGGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTAAGAGCTCAGGCAACGACAAGAGGCCTTTCATCCTGAGGCTGC  100

seq1  GCACTGGCATCAAGTGAAGGGATTCCTTTGCTCTTCTGGCCAGTGGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGCATCAAGTGAAGGGATTCCTTTGCTCTTCTGGCCAGTGGTGTA  150

seq1  GCTTTGGGAAACTGGAGTCAAACAGTTCCTATTTAGCTTGCCTCACAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGGAAACTGGAGTCAAACAGTTCCTATTTAGCTTGCCTCACAGCA  200

seq1  TCTATGGGAGAAGGCTCTATGCGTGCTTCTCGTTAAACGTTCTTGGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGGAGAAGGCTCTATGCGTGCTTCTCGTTAAACGTTCTTGGAAAT  250

seq1  GCACAGCCCGAGAAAGGCAGCAGTAACACGGCTGTTCCAGAAATGCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCCCGAGAAAGGCAGCAGTAACACGGCTGTTCCAGAAATGCCCTT  300

seq1  GGTCTAAATCATGGCCCTGTTTCTTTCTGAATACGGCTCTCGCATTTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAAATCATGGCCCTGTTTCTTTCTGAATACGGCTCTCGCATTTGGT  350

seq1  CCCCCCCTCTGCTCAGCCTCGCCTAGGATGGAATAATAGTAATAGTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCTCTGCTCAGCCTCGCCTAGGATGGAATAATAGTAATAGTGTAT  400

seq1  GGATATTTCAGAGCACTGTCTGGCACGCAGCGGAGGCTGTGGAAGCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTTCAGAGCACTGTCTGGCACGCAGCGGAGGCTGTGGAAGCATCA  450

seq1  TCTCTCACACTAGCAATCGCTACCCACAGGACAGATGCTGAGCGTATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACACTAGCAATCGCTACCCACAGGACAGATGCTGAGCGTATGAA  500

seq1  GTCAGTGCCCATCTTCCTCAGTCTCATCCTTTCCCTGATCTGAATCAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGCCCATCTTCCTCAGTCTCATCCTTTCCCTGATCTGAATCAACT  550

seq1  GATCTCCTCAAGCCCAATCATCGCCTGGCAGCAACTTCAATGGGGGGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCTCAAGCCCAATCATCGCCTGGCAGCAACTTCAATGGGGGGGGC  600

seq1  CTGGTATCCTCCAAGCACTCCCAGAATTC  629
      |||||||||||||||||||||||||||||
seq2  CTGGTATCCTCCAAGCACTCCCAGAATTC  629