BAC Information

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BAC

Clone NameB6Ng01-289J13
Chromosome6 (Build37)
Map Location 94,529,037 - 94,530,196
singlet/doubletsinglet
Overlap geneSlc25a26
Upstream geneLOC665831, Magi1, LOC100043262, LOC665856
Downstream geneLrig1, LOC625941, EG665865, LOC100043276, LOC100043680, Kbtbd8, LOC435912, Suclg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289J13.bB6Ng01-289J13.g
ACCGA086950GA086951
length1,152626
definitionB6Ng01-289J13.b B6Ng01-289J13.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagcaaaaccaagctggacacagtagcacatatctgtaacttc
cacactcactcaaagggttgaagcagcattccaagttcaaggccagcctg
ctctatgcaccaaaaaatataagtctctaaataccctgagggaaacttgg
tggtgcatctgaggcacagccagggtaaagtggagtctggagccgagcaa
ggcgttgctgatgggacacactcaggtaagtgaaggagagattctggaat
gatccccagggttctattaaaggttgggcatcttgttctgaactggtcac
cgtgtgacaccttacttgagggtgccaatgagactgctgagcatcctatg
ctcgcacacagaggaagcaaatgccttgagctacacatgtacaagtcggt
actgctgccccctcaaagcccaggagaagaggtaatgctaccaggttggt
cagggtaagaagtgtcatagctgtgactaacacggaagtggggacagctg
aaggaactcagcttaaaaggaaggtgactgctatgattttgacaaagaat
ttttcggacagtggtgtccagactcccactgctcactacatactatgtac
tgctagggtcctggctgagaaagtttcccaagtcatgtctccacatgaac
acaacagagacatcacctcacatgacacaatctccctacacgacacaaag
caagtttgcgtgtaaaaccataaacacacacacacacacacacacacaca
aaaataacaacaacaacaaaaaaccagccacaagttttctgcttccacaa
agactctgtgatctcatgtttagatgttaaagaaaaacacggaatatagg
aaggcgtgtacactgttatttaaccttgagggaaatgcaaatcaaaaact
ccgatgactcagtagtctacaactctcagagtgtctgtttttctttaatc
aatgaatatgtagcatggacacagaaacaggaatctctcacccgtgctgg
tgagatgcagaatgcactgtacacacacacacacacacacacccctttat
ggaacttttatacattaagaaacacctgtcgattcttacacattaagcac
atactcctctttcagctagcgaacacaatctaggtagcatttctggacag
ac

gaattcttggcccccagttagtgaaactttttgagaaagattagaaggtg
tgatctaccttggaggggtttgtcactacgttatgaaaacctataccatt
cacaattagttctcttttgctgcctccgagttgtgaataaggatgtaagt
gtttggatgcagctccagtgccatacctgcctgtctgcctcatatggctg
tctcctgagaggctctgccccaaatgcagaggcagatgctcacagccaac
cattggactgagcttgggggtccctgatggaggaattggagaagggactg
aaagagctgagggggcttgcatccccatggagggagcaacagtgtcagac
ctcctggagctgtggggaatggaacaccaaccaaagagtacacatggagg
gactcatggctctggctgcatatgtggcagaggataacctgttggacatc
aatgggaggaaaggcccttgggcctagggttgtttgatgccccagtgtag
ggaaatgtcaaggcgggaagacaggagtgagtgggtgggtgggggagcac
cctcatagaggcagggggatgggatacggggtttacaaggatacagagac
ctggaatgggggaaatgtatacaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_94529037_94530196
seq2: B6Ng01-289J13.b_45_1196 (reverse)

seq1  GTCTGTCTCAGAAA-GCTACCTAGGAATGGTG-TCGCTAGGCTGGAAAGA  48
      ||||||| |||||| |||||||||  || ||| |||||| ||| ||||||
seq2  GTCTGTC-CAGAAATGCTACCTAG--ATTGTGTTCGCTA-GCT-GAAAGA  45

seq1  -GAGTATGTGCTTAATGTGTAAGAATTCCGACAGGTGTTTCCTTAATTGT  97
       |||||||||||||||||||||||||  |||||||||||| ||||| |||
seq2  GGAGTATGTGCTTAATGTGTAAGAAT--CGACAGGTGTTT-CTTAA-TGT  91

seq1  ATAAAAG-TCCATAAAGGGGTGTGTGTGTGTGTGTGTGTGGTTTCCAGTG  146
      ||||||| ||||||||||||||||||||||||||||||||   | |||||
seq2  ATAAAAGTTCCATAAAGGGGTGTGTGTGTGTGTGTGTGTG---TACAGTG  138

seq1  CATTCTGCATTCTCACCAGCACGGGTGAGAGATTCCTG-TTCTGTGTCCA  195
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  CATTCTGCA-TCTCACCAGCACGGGTGAGAGATTCCTGTTTCTGTGTCCA  187

seq1  TGCTACATATTCATTGATTTAAAGAAAACAGACACTCTGAGAGTTGTAGA  245
      ||||||||||||||||||| ||  ||||||||||||||||||||||||||
seq2  TGCTACATATTCATTGATTAAAGAAAAACAGACACTCTGAGAGTTGTAGA  237

seq1  CTACTGAGTCATCGGAGTTTTTGATTTGCATTTCCCTCAAGGTTAAATAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGAGTCATCGGAGTTTTTGATTTGCATTTCCCTCAAGGTTAAATAA  287

seq1  CAGTGTACACGCCTTCCTATATTCCGTGTTTTTCTTTAACATCTAAACAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTACACGCCTTCCTATATTCCGTGTTTTTCTTTAACATCTAAACAT  337

seq1  GAGATCACAGAGTCTTTGTGGAAGCAGAAAACTTGTGGCTGGTTTTTTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCACAGAGTCTTTGTGGAAGCAGAAAACTTGTGGCTGGTTTTTTGT  387

seq1  TGTTGTTGTTATTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGGTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTTATTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTTTATGGTT  437

seq1  TTACACGCAAACTTGCTTTGTGTCGTGTAGGGAGATTGTGTCATGTGAGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACGCAAACTTGCTTTGTGTCGTGTAGGGAGATTGTGTCATGTGAGG  487

seq1  TGATGTCTCTGTTGTGTTCATGTGGAGACATGACTTGGGAAACTTTCTCA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTCTGTTGTGTTCATGTGGAGACATGACTTGGGAAACTTTCTCA  537

seq1  GCCAGGACCCTAGCAGTACATAGTATGTAGTGAGCAGTGGGAGTCTGGAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGACCCTAGCAGTACATAGTATGTAGTGAGCAGTGGGAGTCTGGAC  587

seq1  ACCACTGTCCGAAAAATTCTTTGTCAAAATCATAGCAGTCACCTTCCTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGTCCGAAAAATTCTTTGTCAAAATCATAGCAGTCACCTTCCTTT  637

seq1  TAAGCTGAGTTCCTTCAGCTGTCCCCACTTCCGTGTTAGTCACAGCTATG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGAGTTCCTTCAGCTGTCCCCACTTCCGTGTTAGTCACAGCTATG  687

seq1  ACACTTCTTACCCTGACCAACCTGGTAGCATTACCTCTTCTCCTGGGCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTCTTACCCTGACCAACCTGGTAGCATTACCTCTTCTCCTGGGCTT  737

seq1  TGAGGGGGCAGCAGTACCGACTTGTACATGTGTAGCTCAAGGCATTTGCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGGCAGCAGTACCGACTTGTACATGTGTAGCTCAAGGCATTTGCT  787

seq1  TCCTCTGTGTGCGAGCATAGGATGCTCAGCAGTCTCATTGGCACCCTCAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTGTGCGAGCATAGGATGCTCAGCAGTCTCATTGGCACCCTCAA  837

seq1  GTAAGGTGTCACACGGTGACCAGTTCAGAACAAGATGCCCAACCTTTAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTGTCACACGGTGACCAGTTCAGAACAAGATGCCCAACCTTTAAT  887

seq1  AGAACCCTGGGGATCATTCCAGAATCTCTCCTTCACTTACCTGAGTGTGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCTGGGGATCATTCCAGAATCTCTCCTTCACTTACCTGAGTGTGT  937

seq1  CCCATCAGCAACGCCTTGCTCGGCTCCAGACTCCACTTTACCCTGGCTGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCAGCAACGCCTTGCTCGGCTCCAGACTCCACTTTACCCTGGCTGT  987

seq1  GCCTCAGATGCACCACCAAGTTTCCCTCAGGGTATTTAGAGACTTATATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGATGCACCACCAAGTTTCCCTCAGGGTATTTAGAGACTTATATT  1037

seq1  TTTTGGTGCATAGAGCAGGCTGGCCTTGAACTTGGAATGCTGCTTCAACC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGCATAGAGCAGGCTGGCCTTGAACTTGGAATGCTGCTTCAACC  1087

seq1  CTTTGAGTGAGTGTGGAAGTTACAGATATGTGCTACTGTGTCCAGCTTGG  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGTGAGTGTGGAAGTTACAGATATGTGCTACTGTGTCCAGCTTGG  1137

seq1  TTTTGCTCTGAATTC  1160
      |||||||||||||||
seq2  TTTTGCTCTGAATTC  1152


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