BAC Information

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BAC

Clone NameB6Ng01-290P21
Chromosome6 (Build37)
Map Location 13,645,059 - 13,737,718
singlet/doubletdoublet
Overlap genenone
Upstream geneThsd7a, LOC667735, LOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478, Tmem168, B630005N14Rik
Downstream geneGpr85, 2610001J05Rik, LOC100041043, LOC100040513, LOC667797, Ppp1r3a
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-290P21.bB6Ng01-290P21.g
ACCGA087995GA087996
length396100
definitionB6Ng01-290P21.b B6Ng01-290P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,645,059 - 13,645,460)(13,737,619 - 13,737,718)
sequence
ccccccgccttttttttttctttttaaccagctgtattcacaaatttaag
caaagcaggtagctttagacttatgtctggaggacccagttctgtagttt
tcttagtttattctgaagttctctaggaaaatgaagtgcctaaggatgat
atgaaatatctccatggttatatttcaaagcatgacatcacctcactcag
ctaaagatagcatcagatgtaccactcaagctcatcccccccagggaggg
aaggcaccaacagtatcagtcaagcttagctcctggggagggagggaggg
agggagccagtgacatcactcaagcttatgtcctggggagggatggagcc
agtgacatcactcaagtttagctcctggggagggagggaggaggga

ttggccagtctggggtaagaattaaactttgaaagaaaagaaaaagaaag
gaaagggagcaggggacggaaggaagaaaggggtaagggagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_13645059_13645460
seq2: B6Ng01-290P21.b_43_444

seq1  GAATTCCCCCCCGCCTTTTTTTTTTCTTTTTAACCAGCTGTATTCACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCCCGCCTTTTTTTTTTCTTTTTAACCAGCTGTATTCACAAA  50

seq1  TTTAAGCAAAGCAGGTAGCTTTAGACTTATGTCTGGAGGACCCAGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGCAAAGCAGGTAGCTTTAGACTTATGTCTGGAGGACCCAGTTCTG  100

seq1  TAGTTTTCTTAGTTTATTCTGAAGTTCTCTAGGAAAATGAAGTGCCTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCTTAGTTTATTCTGAAGTTCTCTAGGAAAATGAAGTGCCTAAG  150

seq1  GATGATATGAAATATCTCCATGGTTATATTTCAAAGCATGACATCACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATATGAAATATCTCCATGGTTATATTTCAAAGCATGACATCACCTC  200

seq1  ACTCAGCTAAAGATAGCATCAGATGTACCACTCAAGCTCATCCCCCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCTAAAGATAGCATCAGATGTACCACTCAAGCTCATCCCCCCCAG  250

seq1  GGAGGGAAGGCACCAACAGTATCAGTCAAGCTTAGCTCCTGGGGAGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAAGGCACCAACAGTATCAGTCAAGCTTAGCTCCTGGGGAGGGAG  300

seq1  GGAGGGAGGGAGCCAGTGACATCACTCAAGCTTATGTCCTGGGGAGGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGGGAGCCAGTGACATCACTCAAGCTTATGTCCTGGGGAGGGAT  350

seq1  GGAGCCAGTGACATCACTCAAGTTTAGCTCCTGGGGAGGGAGGGAGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAGTGACATCACTCAAGTTTAGCTCCTGGGGAGGGAGGGAGGAGG  400

seq1  GA  402
      ||
seq2  GA  402


seq1: chr6_13737619_13737718
seq2: B6Ng01-290P21.g_73_172 (reverse)

seq1  CCTCCCTCCCTCCCTTACCCCTTTCTTCCTTCCGTCCCCTGCTCCCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCCCTCCCTTACCCCTTTCTTCCTTCCGTCCCCTGCTCCCTTTC  50

seq1  CTTTCTTTTTCTTTTCTTTCAAAGTTTAATTCTTACCCCAGACTGGCCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTTCTTTTCTTTCAAAGTTTAATTCTTACCCCAGACTGGCCAA  100


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