BAC Information

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BAC

Clone NameB6Ng01-292L09
Chromosome6 (Build37)
Map Location 36,479,849 - 36,481,052
singlet/doubletsinglet
Overlap genenone
Upstream geneMtpn, LOC100039312, LOC100039327, 9330158H04Rik, Chrm2
Downstream geneEG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024, Creb3l2, Akr1d1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292L09.bB6Ng01-292L09.g
ACCGA089278GA089279
length1,203864
definitionB6Ng01-292L09.b B6Ng01-292L09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaatacacacataagaaactacaaaaacaaaacaaaacaagc
caaaacaaaacaaaacaaacgaacaaacaaacaaaaaaaactatacatgt
gttttatatccagaaatttcctaaattcttacagtactcaagtctatgaa
atggaaatgtttcttggagaatttaaaaatgaatactttttaacacatta
ttgtaaaatggagccacttggtgcctctgttaagttagtcatttttacaa
ccccttggtgtcttcttgaacagcaatctcgatagtagtttccccatagc
ataaagagcaaatcttagcatgaggactctgatttcttctgctctgtgat
tgagtacttctgttctcatcattgtccttacttataaaacaggtgctttc
tttgtgacagtgtctccactagcacagtgctgtgctgcaccaggcatcaa
tggacctctgatatcatctggaagtcttactgaaccaagatggtttaggc
cagcccctccccttccccaaactccacctctacccaagaccaggccaggg
ctttcagaggcctgaggtgatgtctggggatctgtgtatctaacatattc
tgggatcattctcatggaggtcacactttgaaaacacctgactgtaatct
aacagggattttcatgaagtaccatgataagtagcgaggtttctttacaa
ttcagacacaatcagtatcaggggacattgtcctcatgtaagttggatgg
ttgctgcaaaggacttctcatattgtagacagttcctccaacaaagccac
acctactccaacaaggccacaccttctaatagtgccactccctatgggct
tatggtcccattttttcacccaaaccaccacaatatatactgtcttagat
ttcttttgcagtggtaaaatccagtgatcaaaagcaactcaaagaggaag
ctatttggtttacagcttagaccccatcactgagagagccaggacaggaa
ctcagcagaacatgggcagagctgaagcagaagctacacagaaagtctac
ctactggacgctcagcttgcttttttatgccaccacaggacatctgctcc
agaatgtggtactcacccactgtggcccaaacctccaattgaatcattat
taagaaaattgtcaggcagaacttatctgcaagccaattgcaatcttctc
atc

gaattcaatcgtaagccaggtgctcaggaaggtatgcacacagggcagtg
gactcagtgtttactgcctgtgagaggggctggattcagaacatcaggta
cactcacctggagagtatttgtcatgacaagccaaagaaagaaaagagag
atggaaaacagcaacaatattcattaaaatatttcagctatgcttttaaa
agtgtattgtatactgtagatgtcttttgaaagtaggctctacagctctg
cattttgattggttgtggctttctgtacttgtctttgtgttgtgtgtgga
aagttttcttgatcagggctaaggactacacttacctgtgtgtatataga
tttagatgtttagattcttgttctacatcatgctggccgagtaaagtggt
ggttttatcttctccttcaagatgaatgacgtcattaggactgaatagga
tcctcctaaggctcagggaacactgtgagagagggggtaggtgtggaaag
attgtgagaatcagaggaacatgggggtttctgtgagacagtgtctccta
gttatgtcagaaactacacccataaatatcagcaacatgactgactagac
ataaactgaacaagggagacaccaatggccataaacccatgaggctttca
aatgccactaaaaactacaggcaactgagagatgctgggaaggggaaaaa
attggttttcaggtgaagagcacaaaaagttgattatccaacacctgatt
cctagtccctgaaacacactttgggagtgacattttccagaccgttctta
tgaatatcctcatattccattccgaattcccttttcttatttcccccctt
ttctcctcccttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_36479849_36481052
seq2: B6Ng01-292L09.b_46_1248

seq1  GAATTCCAGAATACACACATAAGAAACTACAAAAACAAAACAAAACAAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAATACACACATAAGAAACTACAAAAACAAAACAAAACAAGC  50

seq1  CAAAACAAAACAAAACAAACGAACAAACAAACAAAAAAAACTATACATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAAACAAAACAAACGAACAAACAAACAAAAAAAACTATACATGT  100

seq1  GTTTTATATCCAGAAATTTCCTAAATTCTTACAGTACTCAAGTCTATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATATCCAGAAATTTCCTAAATTCTTACAGTACTCAAGTCTATGAA  150

seq1  ATGGAAATGTTTCTTGGAGAATTTAAAAATGAATACTTTTTAACACATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATGTTTCTTGGAGAATTTAAAAATGAATACTTTTTAACACATTA  200

seq1  TTGTAAAATGGAGCCACTTGGTGCCTCTGTTAAGTTAGTCATTTTTACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAATGGAGCCACTTGGTGCCTCTGTTAAGTTAGTCATTTTTACAA  250

seq1  CCCCTTGGTGTCTTCTTGAACAGCAATCTCGATAGTAGTTTCCCCATAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTGGTGTCTTCTTGAACAGCAATCTCGATAGTAGTTTCCCCATAGC  300

seq1  ATAAAGAGCAAATCTTAGCATGAGGACTCTGATTTCTTCTGCTCTGTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAGCAAATCTTAGCATGAGGACTCTGATTTCTTCTGCTCTGTGAT  350

seq1  TGAGTACTTCTGTTCTCATCATTGTCCTTACTTATAAAACAGGTGCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACTTCTGTTCTCATCATTGTCCTTACTTATAAAACAGGTGCTTTC  400

seq1  TTTGTGACAGTGTCTCCACTAGCACAGTGCTGTGCTGCACCAGGCATCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACAGTGTCTCCACTAGCACAGTGCTGTGCTGCACCAGGCATCAA  450

seq1  TGGACCTCTGATATCATCTGGAAGTCTTACTGAACCAAGATGGTTTAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTCTGATATCATCTGGAAGTCTTACTGAACCAAGATGGTTTAGGC  500

seq1  CAGCCCCTCCCCTTCCCCAAACTCCACCTCTACCCAAGACCAGGCCAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCCTCCCCTTCCCCAAACTCCACCTCTACCCAAGACCAGGCCAGGG  550

seq1  CTTTCAGAGGCCTGAGGTGATGTCTGGGGATCTGTGTATCTAACATATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGAGGCCTGAGGTGATGTCTGGGGATCTGTGTATCTAACATATTC  600

seq1  TGGGATCATTCTCATGGAGGTCACACTTTGAAAACACCTGACTGTAATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATCATTCTCATGGAGGTCACACTTTGAAAACACCTGACTGTAATCT  650

seq1  AACAGGGATTTTCATGAAGTACCATGATAAGTAGCGAGGTTTCTTTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGATTTTCATGAAGTACCATGATAAGTAGCGAGGTTTCTTTACAA  700

seq1  TTCAGACACAATCAGTATCAGGGGACATTGTCCTCATGTAAGTTGGATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACACAATCAGTATCAGGGGACATTGTCCTCATGTAAGTTGGATGG  750

seq1  TTGCTGCAAAGGACTTCTCATATTGTAGACAGTTCCTCCAACAAAGCCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCAAAGGACTTCTCATATTGTAGACAGTTCCTCCAACAAAGCCAC  800

seq1  ACCTACTCCAACAAGGCCACACCTTCTAATAGTGCCACTCCCTATGGGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTCCAACAAGGCCACACCTTCTAATAGTGCCACTCCCTATGGGCT  850

seq1  TATGGTCCCATTTTTTCACCCAAACCACCACAATATATACTGTCTTAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCCCATTTTTTCACCCAAACCACCACAATATATACTGTCTTAGAT  900

seq1  TTCTTTTGCAGTGGTAAAATCCAGTGATCAAAAGCAACTCAAAGAGGAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGCAGTGGTAAAATCCAGTGATCAAAAGCAACTCAAAGAGGAAG  950

seq1  CTATTTGGTTTACAGCTTAGACCCCATCACTGAGAGAGGCCAGGACAGGA  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTATTTGGTTTACAGCTTAGACCCCATCACTGAGAGA-GCCAGGACAGGA  999

seq1  ACTCAAGGCAGGAACATGGGGCAGAGCTGAAGCAGAAGCTACACAGAAAG  1050
      |||||  ||| |||||| ||||||||||||||||||||||||||||||||
seq2  ACTCA--GCA-GAACAT-GGGCAGAGCTGAAGCAGAAGCTACACAGAAAG  1045

seq1  TCTACCTACTGGACGCTCAGCTTGCCTTTTTATGCCA-CACAGGACCATC  1099
      ||||||||||||||||||||||||| ||||||||||| ||||||| ||||
seq2  TCTACCTACTGGACGCTCAGCTTGCTTTTTTATGCCACCACAGGA-CATC  1094

seq1  TGCT-CAG-ATGTGGTACTCA-CCACTGTGGGCCAAAACCTCCAAATTGA  1146
      |||| ||| |||||||||||| ||||||| |||| |||||||||| |  |
seq2  TGCTCCAGAATGTGGTACTCACCCACTGT-GGCCCAAACCTCCAATTGAA  1143

seq1  TCATTAATTAAGAAAA-TGTCAAGCAG-ACTTATCTGCAAGCCAATCGC-  1193
      ||||| |||||||||| ||||| |||| |||||||||||||||||| || 
seq2  TCATT-ATTAAGAAAATTGTCAGGCAGAACTTATCTGCAAGCCAATTGCA  1192

seq1  ATCTTCTCATC  1204
      |||||||||||
seq2  ATCTTCTCATC  1203


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